RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 HOXA1P49639 335 aaPredicted RBP11.66□□□□□ -0.54
SMG6-220ENST00000576218 ERHP84090 104 aaKnown RBP11.66□□□□□ -0.54
SMG6-220ENST00000576218 LCN12Q6JVE5 192 aa11.66□□□□□ -0.54
SMG6-220ENST00000576218 PLET1Q6UQ28 207 aa11.66□□□□□ -0.54
SMG6-220ENST00000576218 UBAC2Q8NBM4 344 aa11.66□□□□□ -0.54
SMG6-220ENST00000576218 MISP3Q96FF7 219 aa11.66□□□□□ -0.54
SMG6-220ENST00000576218 CCDC140Q96MF4 163 aa11.66□□□□□ -0.54
SMG6-220ENST00000576218 SMAD5-AS1Q9Y6J3 95 aa11.66□□□□□ -0.54
SMG6-220ENST00000576218 IGHV3-21A0A0B4J1V1 117 aa11.65□□□□□ -0.54
SMG6-220ENST00000576218 CLEC3BP05452 202 aa11.65□□□□□ -0.54
SMG6-220ENST00000576218 UCP1P25874 307 aa11.65□□□□□ -0.54
SMG6-220ENST00000576218 SNCAP37840 140 aa11.65□□□□□ -0.54
SMG6-220ENST00000576218 HSPE1P61604 102 aaKnown RBP11.65□□□□□ -0.54
SMG6-220ENST00000576218 PRCDQ00LT1 54 aa11.65□□□□□ -0.54
SMG6-220ENST00000576218 DHODHQ02127 395 aa11.65□□□□□ -0.54
SMG6-220ENST00000576218 IZUMO4Q1ZYL8 232 aa11.65□□□□□ -0.54
SMG6-220ENST00000576218 Q56UQ5 140 aa11.65□□□□□ -0.54
SMG6-220ENST00000576218 SPINK9Q5DT21 86 aa11.65□□□□□ -0.54
SMG6-220ENST00000576218 ZNF57Q68EA5 555 aaPredicted RBP11.65□□□□□ -0.54
SMG6-220ENST00000576218 TMEM222Q9H0R3 208 aa11.65□□□□□ -0.54
SMG6-220ENST00000576218 C5orf66Q9H5L9 145 aa11.65□□□□□ -0.54
SMG6-220ENST00000576218 SLC2A8Q9NY64 477 aa11.65□□□□□ -0.54
SMG6-220ENST00000576218 KCNIP3Q9Y2W7 256 aa11.65□□□□□ -0.54
SMG6-220ENST00000576218 V9GYH0 126 aa11.65□□□□□ -0.54
SMG6-220ENST00000576218 DBX1A6NMT0 343 aa11.64□□□□□ -0.55
SMG6-220ENST00000576218 IGKV1-5P01602 117 aa11.64□□□□□ -0.55
SMG6-220ENST00000576218 IGLV1-51P01701 117 aa11.64□□□□□ -0.55
SMG6-220ENST00000576218 ANXA3P12429 323 aa11.64□□□□□ -0.55
SMG6-220ENST00000576218 AKR1C4P17516 323 aa11.64□□□□□ -0.55
SMG6-220ENST00000576218 TMEM268Q5VZI3 342 aa11.64□□□□□ -0.55
SMG6-220ENST00000576218 TRIQKQ629K1 86 aa11.64□□□□□ -0.55
SMG6-220ENST00000576218 GTSCR1Q86UQ5 136 aa11.64□□□□□ -0.55
SMG6-220ENST00000576218 OR1P1Q8NH06 330 aa11.64□□□□□ -0.55
SMG6-220ENST00000576218 VN1R17PQ8TDU5 208 aa11.64□□□□□ -0.55
SMG6-220ENST00000576218 RBPMSQ93062 196 aaKnown RBP11.64□□□□□ -0.55
SMG6-220ENST00000576218 B9D2Q9BPU9 175 aa11.64□□□□□ -0.55
SMG6-220ENST00000576218 SOSTQ9BQB4 213 aa11.64□□□□□ -0.55
SMG6-220ENST00000576218 RTBDNQ9BSG5 229 aaPredicted RBP11.64□□□□□ -0.55
SMG6-220ENST00000576218 C21orf62Q9NYP8 219 aa11.64□□□□□ -0.55
SMG6-220ENST00000576218 NDUFA13Q9P0J0 144 aa11.64□□□□□ -0.55
SMG6-220ENST00000576218 GPR132Q9UNW8 380 aa11.64□□□□□ -0.55
SMG6-220ENST00000576218 PRKDCP78527 4128 aaKnown RBP11.63□□□□□ -0.55
SMG6-220ENST00000576218 OR2T8A6NH00 312 aa11.63□□□□□ -0.55
SMG6-220ENST00000576218 CRYM-AS1A6NIL9 109 aa11.63□□□□□ -0.55
SMG6-220ENST00000576218 CSN3P07498 182 aa11.63□□□□□ -0.55
SMG6-220ENST00000576218 TMED4Q7Z7H5 227 aa11.63□□□□□ -0.55
SMG6-220ENST00000576218 CCDC190Q86UF4 302 aa11.63□□□□□ -0.55
SMG6-220ENST00000576218 FAM219AQ8IW50 185 aa11.63□□□□□ -0.55
SMG6-220ENST00000576218 ZNF502Q8TBZ5 544 aa11.63□□□□□ -0.55
SMG6-220ENST00000576218 PINX1Q96BK5 328 aaKnown RBP11.63□□□□□ -0.55
SMG6-220ENST00000576218 PALMDQ9NP74 551 aa11.63□□□□□ -0.55
SMG6-220ENST00000576218 SORL1Q92673 2214 aa11.62□□□□□ -0.55
SMG6-220ENST00000576218 IGHV3-35A0A0C4DH35 117 aa11.62□□□□□ -0.55
SMG6-220ENST00000576218 ST8SIA3O43173 380 aa11.62□□□□□ -0.55
SMG6-220ENST00000576218 TGOLN2O43493 480 aa11.62□□□□□ -0.55
SMG6-220ENST00000576218 SUB1P53999 127 aaKnown RBP eCLIP11.62□□□□□ -0.55
SMG6-220ENST00000576218 KLF9Q13886 244 aaPredicted RBP11.62□□□□□ -0.55
SMG6-220ENST00000576218 KLK9Q2XQG4 91 aa11.62□□□□□ -0.55
SMG6-220ENST00000576218 GPHB5Q86YW7 130 aa11.62□□□□□ -0.55
SMG6-220ENST00000576218 OR2C3Q8N628 320 aa11.62□□□□□ -0.55
SMG6-220ENST00000576218 TRIM63Q969Q1 353 aa11.62□□□□□ -0.55
SMG6-220ENST00000576218 BSCL2Q96G97 398 aaPredicted RBP11.62□□□□□ -0.55
SMG6-220ENST00000576218 GAR1Q9NY12 217 aaKnown RBP11.62□□□□□ -0.55
SMG6-220ENST00000576218 KLK9Q9UKQ9 250 aa11.62□□□□□ -0.55
SMG6-220ENST00000576218 LSM4Q9Y4Z0 139 aaKnown RBP11.62□□□□□ -0.55
SMG6-220ENST00000576218 DMRT1Q9Y5R6 373 aa11.62□□□□□ -0.55
SMG6-220ENST00000576218 C2orf70A6NJV1 201 aa11.61□□□□□ -0.55
SMG6-220ENST00000576218 LGALS9O00182 355 aa11.61□□□□□ -0.55
SMG6-220ENST00000576218 CDS2O95674 445 aa11.61□□□□□ -0.55
SMG6-220ENST00000576218 FOLR2P14207 255 aa11.61□□□□□ -0.55
SMG6-220ENST00000576218 ZNF79Q15937 498 aa11.61□□□□□ -0.55
SMG6-220ENST00000576218 IL34Q6ZMJ4 242 aa11.61□□□□□ -0.55
SMG6-220ENST00000576218 OR2K2Q8NGT1 345 aa11.61□□□□□ -0.55
SMG6-220ENST00000576218 SCARB1Q8WTV0 552 aa11.61□□□□□ -0.55
SMG6-220ENST00000576218 GLYATL2Q8WU03 294 aa11.61□□□□□ -0.55
SMG6-220ENST00000576218 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.61□□□□□ -0.55
SMG6-220ENST00000576218 SIGLEC8Q9NYZ4 499 aa11.61□□□□□ -0.55
SMG6-220ENST00000576218 UFC1Q9Y3C8 167 aa11.61□□□□□ -0.55
SMG6-220ENST00000576218 A0A0B4J293 547 aa11.6□□□□□ -0.55
SMG6-220ENST00000576218 PIGBOS1A0A0B4J2F0 54 aa11.6□□□□□ -0.55
SMG6-220ENST00000576218 ETV6P41212 452 aa11.6□□□□□ -0.55
SMG6-220ENST00000576218 MFAP2P55001 183 aa11.6□□□□□ -0.55
SMG6-220ENST00000576218 SRPXP78539 464 aa11.6□□□□□ -0.55
SMG6-220ENST00000576218 GUCA2BQ16661 112 aa11.6□□□□□ -0.55
SMG6-220ENST00000576218 SPSB3Q6PJ21 355 aa11.6□□□□□ -0.55
SMG6-220ENST00000576218 SELENOHQ8IZQ5 122 aaKnown RBP11.6□□□□□ -0.55
SMG6-220ENST00000576218 DEDD2Q8WXF8 326 aa11.6□□□□□ -0.55
SMG6-220ENST00000576218 ASCL2Q99929 193 aa11.6□□□□□ -0.55
SMG6-220ENST00000576218 C20orf24Q9BUV8 137 aa11.6□□□□□ -0.55
SMG6-220ENST00000576218 TECRQ9NZ01 308 aaKnown RBP11.6□□□□□ -0.55
SMG6-220ENST00000576218 CACNG5Q9UF02 275 aa11.6□□□□□ -0.55
SMG6-220ENST00000576218 A0A0G2JRQ6 117 aa11.59□□□□□ -0.55
SMG6-220ENST00000576218 CEBPZOSA8MTT3 80 aa11.59□□□□□ -0.55
SMG6-220ENST00000576218 NUPL2O15504 423 aaKnown RBP11.59□□□□□ -0.55
SMG6-220ENST00000576218 GNG7O60262 68 aa11.59□□□□□ -0.55
SMG6-220ENST00000576218 MT-CO2P00403 227 aa11.59□□□□□ -0.55
SMG6-220ENST00000576218 P0C879 139 aa11.59□□□□□ -0.55
SMG6-220ENST00000576218 VAMP1P23763 118 aa11.59□□□□□ -0.55
SMG6-220ENST00000576218 MFAP4P55083 255 aa11.59□□□□□ -0.55
SMG6-220ENST00000576218 CD300EQ496F6 205 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms