RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 FAM25CB3EWG5 89 aa13.06□□□□□ -0.32
SMG6-214ENST00000573827 FAM25GB3EWG6 89 aa13.06□□□□□ -0.32
SMG6-214ENST00000573827 PI3P19957 117 aa13.06□□□□□ -0.32
SMG6-214ENST00000573827 ELLP55199 621 aaPredicted RBP13.06□□□□□ -0.32
SMG6-214ENST00000573827 ARRDC1Q8N5I2 433 aa13.06□□□□□ -0.32
SMG6-214ENST00000573827 SPATA25Q9BR10 227 aa13.06□□□□□ -0.32
SMG6-214ENST00000573827 THYN1Q9P016 225 aa13.06□□□□□ -0.32
SMG6-214ENST00000573827 IGHV3-21A0A0B4J1V1 117 aa13.05□□□□□ -0.32
SMG6-214ENST00000573827 CTDSP2O14595 271 aa13.05□□□□□ -0.32
SMG6-214ENST00000573827 SNAPC5O75971 98 aa13.05□□□□□ -0.32
SMG6-214ENST00000573827 IGKV1-5P01602 117 aa13.05□□□□□ -0.32
SMG6-214ENST00000573827 TBPP20226 339 aa13.05□□□□□ -0.32
SMG6-214ENST00000573827 ZNF57Q68EA5 555 aaPredicted RBP13.05□□□□□ -0.32
SMG6-214ENST00000573827 SLC25A24Q6NUK1 477 aa13.05□□□□□ -0.32
SMG6-214ENST00000573827 PLET1Q6UQ28 207 aa13.05□□□□□ -0.32
SMG6-214ENST00000573827 OR2C3Q8N628 320 aa13.05□□□□□ -0.32
SMG6-214ENST00000573827 OR1P1Q8NH06 330 aa13.05□□□□□ -0.32
SMG6-214ENST00000573827 ZNF486Q96H40 463 aaPredicted RBP13.05□□□□□ -0.32
SMG6-214ENST00000573827 TSC22D3Q99576 134 aa13.05□□□□□ -0.32
SMG6-214ENST00000573827 HINT2Q9BX68 163 aa13.05□□□□□ -0.32
SMG6-214ENST00000573827 HIPK2Q9H2X6 1198 aa13.05□□□□□ -0.32
SMG6-214ENST00000573827 TUBA4BQ9H853 241 aa13.05□□□□□ -0.32
SMG6-214ENST00000573827 SLC2A8Q9NY64 477 aa13.05□□□□□ -0.32
SMG6-214ENST00000573827 FKBP11Q9NYL4 201 aa13.05□□□□□ -0.32
SMG6-214ENST00000573827 OR2T8A6NH00 312 aa13.04□□□□□ -0.32
SMG6-214ENST00000573827 I3L2K1 104 aa13.04□□□□□ -0.32
SMG6-214ENST00000573827 GUCA2BQ16661 112 aa13.04□□□□□ -0.32
SMG6-214ENST00000573827 IZUMO4Q1ZYL8 232 aa13.04□□□□□ -0.32
SMG6-214ENST00000573827 RNASE10Q5GAN6 216 aaKnown RBP13.04□□□□□ -0.32
SMG6-214ENST00000573827 BTNL8Q6UX41 500 aa13.04□□□□□ -0.32
SMG6-214ENST00000573827 GPR141Q7Z602 305 aa13.04□□□□□ -0.32
SMG6-214ENST00000573827 ZNF114Q8NC26 417 aa13.04□□□□□ -0.32
SMG6-214ENST00000573827 MARC2Q969Z3 335 aa13.04□□□□□ -0.32
SMG6-214ENST00000573827 BSCL2Q96G97 398 aaPredicted RBP13.04□□□□□ -0.32
SMG6-214ENST00000573827 TP53RKQ96S44 253 aa13.04□□□□□ -0.32
SMG6-214ENST00000573827 RETNQ9HD89 108 aa13.04□□□□□ -0.32
SMG6-214ENST00000573827 C21orf62Q9NYP8 219 aa13.04□□□□□ -0.32
SMG6-214ENST00000573827 CEPT1Q9Y6K0 416 aa13.04□□□□□ -0.32
SMG6-214ENST00000573827 EPPK1P58107 5090 aaKnown RBP13.03□□□□□ -0.32
SMG6-214ENST00000573827 A0A0B4J293 547 aa13.03□□□□□ -0.32
SMG6-214ENST00000573827 OR11H12B2RN74 326 aa13.03□□□□□ -0.32
SMG6-214ENST00000573827 CTSGP08311 255 aa13.03□□□□□ -0.32
SMG6-214ENST00000573827 PIGPP57054 158 aa13.03□□□□□ -0.32
SMG6-214ENST00000573827 PRCDQ00LT1 54 aa13.03□□□□□ -0.32
SMG6-214ENST00000573827 TMEM229BQ8NBD8 167 aa13.03□□□□□ -0.32
SMG6-214ENST00000573827 TMEM56Q96MV1 263 aa13.03□□□□□ -0.32
SMG6-214ENST00000573827 MRPL27Q9P0M9 148 aaKnown RBP13.03□□□□□ -0.32
SMG6-214ENST00000573827 TRAV25A0A0B4J276 109 aa13.02□□□□□ -0.33
SMG6-214ENST00000573827 GABARAPH6UMI1 98 aa13.02□□□□□ -0.33
SMG6-214ENST00000573827 S100GP29377 79 aa13.02□□□□□ -0.33
SMG6-214ENST00000573827 FCGR2BP31994 310 aaPredicted RBP13.02□□□□□ -0.33
SMG6-214ENST00000573827 HSPE1P61604 102 aaKnown RBP13.02□□□□□ -0.33
SMG6-214ENST00000573827 PVRIGQ6DKI7 326 aa13.02□□□□□ -0.33
SMG6-214ENST00000573827 SPSB3Q6PJ21 355 aa13.02□□□□□ -0.33
SMG6-214ENST00000573827 H2BFWTQ7Z2G1 175 aa13.02□□□□□ -0.33
SMG6-214ENST00000573827 OR1L6Q8NGR2 347 aa13.02□□□□□ -0.33
SMG6-214ENST00000573827 TERB2Q8NHR7 220 aa13.02□□□□□ -0.33
SMG6-214ENST00000573827 DYNC2LI1Q8TCX1 351 aa13.02□□□□□ -0.33
SMG6-214ENST00000573827 SRD5A3Q9H8P0 318 aa13.02□□□□□ -0.33
SMG6-214ENST00000573827 PALMDQ9NP74 551 aa13.02□□□□□ -0.33
SMG6-214ENST00000573827 UFC1Q9Y3C8 167 aa13.02□□□□□ -0.33
SMG6-214ENST00000573827 NDUFA4O00483 81 aa13.01□□□□□ -0.33
SMG6-214ENST00000573827 CYB5BO43169 146 aa13.01□□□□□ -0.33
SMG6-214ENST00000573827 SCAF4O95104 1147 aaKnown RBP13.01□□□□□ -0.33
SMG6-214ENST00000573827 IFNA6P05013 189 aa13.01□□□□□ -0.33
SMG6-214ENST00000573827 OR13C8Q8NGS7 320 aa13.01□□□□□ -0.33
SMG6-214ENST00000573827 C15orf40Q8WUR7 153 aa13.01□□□□□ -0.33
SMG6-214ENST00000573827 SMIM4Q8WVI0 70 aa13.01□□□□□ -0.33
SMG6-214ENST00000573827 C5orf66Q9H5L9 145 aa13.01□□□□□ -0.33
SMG6-214ENST00000573827 A0A0G2JRQ6 117 aa13□□□□□ -0.33
SMG6-214ENST00000573827 INS-IGF2F8WCM5 200 aa13□□□□□ -0.33
SMG6-214ENST00000573827 LYL1P12980 280 aa13□□□□□ -0.33
SMG6-214ENST00000573827 PGAM2P15259 253 aa13□□□□□ -0.33
SMG6-214ENST00000573827 UCP1P25874 307 aa13□□□□□ -0.33
SMG6-214ENST00000573827 PPP5CP53041 499 aa13□□□□□ -0.33
SMG6-214ENST00000573827 TAS2R19P59542 299 aa13□□□□□ -0.33
SMG6-214ENST00000573827 SSBP1Q04837 148 aaKnown RBP13□□□□□ -0.33
SMG6-214ENST00000573827 STEAP1BQ6NZ63 245 aa13□□□□□ -0.33
SMG6-214ENST00000573827 CLVS1Q8IUQ0 354 aaPredicted RBP13□□□□□ -0.33
SMG6-214ENST00000573827 OR4A16Q8NH70 328 aa13□□□□□ -0.33
SMG6-214ENST00000573827 DAZ1Q9NQZ3 744 aaKnown RBP13□□□□□ -0.33
SMG6-214ENST00000573827 C3orf85A0A1B0GTC6 90 aa12.99□□□□□ -0.33
SMG6-214ENST00000573827 K7EMT4 169 aa12.99□□□□□ -0.33
SMG6-214ENST00000573827 RAB3DO95716 219 aa12.99□□□□□ -0.33
SMG6-214ENST00000573827 CTSDP07339 412 aaPredicted RBP12.99□□□□□ -0.33
SMG6-214ENST00000573827 AARDQ4LEZ3 155 aa12.99□□□□□ -0.33
SMG6-214ENST00000573827 FAAP20Q6NZ36 180 aa12.99□□□□□ -0.33
SMG6-214ENST00000573827 SLC16A13Q7RTY0 426 aa12.99□□□□□ -0.33
SMG6-214ENST00000573827 MARCH1Q8TCQ1 289 aa12.99□□□□□ -0.33
SMG6-214ENST00000573827 RAB2BQ8WUD1 216 aa12.99□□□□□ -0.33
SMG6-214ENST00000573827 ISOC1Q96CN7 298 aa12.99□□□□□ -0.33
SMG6-214ENST00000573827 SOSTQ9BQB4 213 aa12.99□□□□□ -0.33
SMG6-214ENST00000573827 BCL7BQ9BQE9 202 aa12.99□□□□□ -0.33
SMG6-214ENST00000573827 RTBDNQ9BSG5 229 aaPredicted RBP12.99□□□□□ -0.33
SMG6-214ENST00000573827 CCDC59Q9P031 241 aaKnown RBP12.99□□□□□ -0.33
SMG6-214ENST00000573827 IGHV3OR16-8A0A075B7F1 116 aa12.98□□□□□ -0.33
SMG6-214ENST00000573827 TSPAN4O14817 238 aa12.98□□□□□ -0.33
SMG6-214ENST00000573827 CTDSPLO15194 276 aa12.98□□□□□ -0.33
SMG6-214ENST00000573827 MT-CO2P00403 227 aa12.98□□□□□ -0.33
SMG6-214ENST00000573827 TMBIM6P55061 237 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms