RNA–Protein interactions for RNA: ENST00000572290.1

NUP88-204, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-204ENST00000572290 MFAP2P55001 183 aa15.29■□□□□ 0.04
NUP88-204ENST00000572290 PRCDQ00LT1 54 aa15.29■□□□□ 0.04
NUP88-204ENST00000572290 IZUMO4Q1ZYL8 232 aa15.29■□□□□ 0.04
NUP88-204ENST00000572290 LCN12Q6JVE5 192 aa15.29■□□□□ 0.04
NUP88-204ENST00000572290 ADAMTSL5Q6ZMM2 481 aa15.29■□□□□ 0.04
NUP88-204ENST00000572290 OR51S1Q8NGJ8 323 aa15.29■□□□□ 0.04
NUP88-204ENST00000572290 OR2K2Q8NGT1 345 aa15.29■□□□□ 0.04
NUP88-204ENST00000572290 ASCL2Q99929 193 aa15.29■□□□□ 0.04
NUP88-204ENST00000572290 ZC4H2Q9NQZ6 224 aa15.29■□□□□ 0.04
NUP88-204ENST00000572290 GPR132Q9UNW8 380 aa15.29■□□□□ 0.04
NUP88-204ENST00000572290 TEX13DA0A0J9YY54 714 aaPredicted RBP15.28■□□□□ 0.04
NUP88-204ENST00000572290 ZNF320A2RRD8 509 aa15.28■□□□□ 0.04
NUP88-204ENST00000572290 C2orf70A6NJV1 201 aa15.28■□□□□ 0.04
NUP88-204ENST00000572290 P0C879 139 aa15.28■□□□□ 0.04
NUP88-204ENST00000572290 FOLR2P14207 255 aa15.28■□□□□ 0.04
NUP88-204ENST00000572290 S100A5P33763 92 aa15.28■□□□□ 0.04
NUP88-204ENST00000572290 OR2C3Q8N628 320 aa15.28■□□□□ 0.04
NUP88-204ENST00000572290 OR1P1Q8NH06 330 aa15.28■□□□□ 0.04
NUP88-204ENST00000572290 DYNLRB2Q8TF09 96 aa15.28■□□□□ 0.04
NUP88-204ENST00000572290 THAP7Q9BT49 309 aaPredicted RBP15.28■□□□□ 0.04
NUP88-204ENST00000572290 C5orf66Q9H5L9 145 aa15.28■□□□□ 0.04
NUP88-204ENST00000572290 NAA60Q9H7X0 242 aa15.28■□□□□ 0.04
NUP88-204ENST00000572290 SLC2A8Q9NY64 477 aa15.28■□□□□ 0.04
NUP88-204ENST00000572290 SCP2D1Q9UJQ7 156 aa15.28■□□□□ 0.04
NUP88-204ENST00000572290 ZNF701M0R085 212 aaPredicted RBP15.27■□□□□ 0.04
NUP88-204ENST00000572290 OR5AC1P0C628 307 aa15.27■□□□□ 0.04
NUP88-204ENST00000572290 PLET1Q6UQ28 207 aa15.27■□□□□ 0.04
NUP88-204ENST00000572290 Q8N1Y9 231 aa15.27■□□□□ 0.04
NUP88-204ENST00000572290 RRNAD1Q96FB5 475 aaKnown RBP15.27■□□□□ 0.04
NUP88-204ENST00000572290 PLEKHA3Q9HB20 300 aa15.27■□□□□ 0.04
NUP88-204ENST00000572290 C21orf62Q9NYP8 219 aa15.27■□□□□ 0.04
NUP88-204ENST00000572290 IGHV3-21A0A0B4J1V1 117 aa15.26■□□□□ 0.03
NUP88-204ENST00000572290 A0A0B4J293 547 aa15.26■□□□□ 0.03
NUP88-204ENST00000572290 IZUMO1RA6ND01 250 aa15.26■□□□□ 0.03
NUP88-204ENST00000572290 TGOLN2O43493 480 aa15.26■□□□□ 0.03
NUP88-204ENST00000572290 EDN2P20800 178 aa15.26■□□□□ 0.03
NUP88-204ENST00000572290 ERHP84090 104 aaKnown RBP15.26■□□□□ 0.03
NUP88-204ENST00000572290 PYDC2Q56P42 97 aa15.26■□□□□ 0.03
NUP88-204ENST00000572290 SGPP2Q8IWX5 399 aa15.26■□□□□ 0.03
NUP88-204ENST00000572290 RNASE11Q8TAA1 199 aaKnown RBP15.26■□□□□ 0.03
NUP88-204ENST00000572290 SCARB1Q8WTV0 552 aa15.26■□□□□ 0.03
NUP88-204ENST00000572290 TMEM222Q9H0R3 208 aa15.26■□□□□ 0.03
NUP88-204ENST00000572290 MCUBQ9NWR8 336 aa15.26■□□□□ 0.03
NUP88-204ENST00000572290 CRYM-AS1A6NIL9 109 aa15.25■□□□□ 0.03
NUP88-204ENST00000572290 A8MWP6 167 aa15.25■□□□□ 0.03
NUP88-204ENST00000572290 K7EIM0 57 aa15.25■□□□□ 0.03
NUP88-204ENST00000572290 CDS2O95674 445 aa15.25■□□□□ 0.03
NUP88-204ENST00000572290 FRMD6-AS1P0C7T7 363 aa15.25■□□□□ 0.03
NUP88-204ENST00000572290 DHODHQ02127 395 aa15.25■□□□□ 0.03
NUP88-204ENST00000572290 DEFB114Q30KQ6 69 aa15.25■□□□□ 0.03
NUP88-204ENST00000572290 CD300EQ496F6 205 aaPredicted RBP15.25■□□□□ 0.03
NUP88-204ENST00000572290 ZNF114Q8NC26 417 aa15.25■□□□□ 0.03
NUP88-204ENST00000572290 GLYATL2Q8WU03 294 aa15.25■□□□□ 0.03
NUP88-204ENST00000572290 BSCL2Q96G97 398 aaPredicted RBP15.25■□□□□ 0.03
NUP88-204ENST00000572290 SCGB3A2Q96PL1 93 aa15.25■□□□□ 0.03
NUP88-204ENST00000572290 ATP6V0BQ99437 205 aa15.25■□□□□ 0.03
NUP88-204ENST00000572290 PDCD10Q9BUL8 212 aa15.25■□□□□ 0.03
NUP88-204ENST00000572290 PALMDQ9NP74 551 aa15.25■□□□□ 0.03
NUP88-204ENST00000572290 TECRQ9NZ01 308 aaKnown RBP15.25■□□□□ 0.03
NUP88-204ENST00000572290 V9GYH0 126 aa15.25■□□□□ 0.03
NUP88-204ENST00000572290 IGHV3-35A0A0C4DH35 117 aa15.24■□□□□ 0.03
NUP88-204ENST00000572290 A0A0G2JRQ6 117 aa15.24■□□□□ 0.03
NUP88-204ENST00000572290 TMEM213A2RRL7 107 aa15.24■□□□□ 0.03
NUP88-204ENST00000572290 OR2T8A6NH00 312 aa15.24■□□□□ 0.03
NUP88-204ENST00000572290 ST8SIA3O43173 380 aa15.24■□□□□ 0.03
NUP88-204ENST00000572290 IFNA17P01571 189 aa15.24■□□□□ 0.03
NUP88-204ENST00000572290 CBLN1P23435 193 aa15.24■□□□□ 0.03
NUP88-204ENST00000572290 SPINK9Q5DT21 86 aa15.24■□□□□ 0.03
NUP88-204ENST00000572290 UNQ9165/PRO28630Q6UXU0 137 aa15.24■□□□□ 0.03
NUP88-204ENST00000572290 GTSCR1Q86UQ5 136 aa15.24■□□□□ 0.03
NUP88-204ENST00000572290 SLC35G3Q8N808 338 aa15.24■□□□□ 0.03
NUP88-204ENST00000572290 IGHV4-30-4P0DP06 118 aa15.23■□□□□ 0.03
NUP88-204ENST00000572290 FAUP35544 74 aaKnown RBP15.23■□□□□ 0.03
NUP88-204ENST00000572290 AP3S2P59780 193 aa15.23■□□□□ 0.03
NUP88-204ENST00000572290 Q56UQ5 140 aa15.23■□□□□ 0.03
NUP88-204ENST00000572290 SPSB3Q6PJ21 355 aa15.23■□□□□ 0.03
NUP88-204ENST00000572290 CCDC190Q86UF4 302 aa15.23■□□□□ 0.03
NUP88-204ENST00000572290 FAM219AQ8IW50 185 aa15.23■□□□□ 0.03
NUP88-204ENST00000572290 UBAC2Q8NBM4 344 aa15.23■□□□□ 0.03
NUP88-204ENST00000572290 LHFPL5Q8TAF8 219 aa15.23■□□□□ 0.03
NUP88-204ENST00000572290 CACNG8Q8WXS5 425 aa15.23■□□□□ 0.03
NUP88-204ENST00000572290 RBPMSQ93062 196 aaKnown RBP15.23■□□□□ 0.03
NUP88-204ENST00000572290 TRIM63Q969Q1 353 aa15.23■□□□□ 0.03
NUP88-204ENST00000572290 MISP3Q96FF7 219 aa15.23■□□□□ 0.03
NUP88-204ENST00000572290 ZNF436Q9C0F3 470 aaPredicted RBP15.23■□□□□ 0.03
NUP88-204ENST00000572290 UFC1Q9Y3C8 167 aa15.23■□□□□ 0.03
NUP88-204ENST00000572290 INS-IGF2F8WCM5 200 aa15.22■□□□□ 0.03
NUP88-204ENST00000572290 KLF9Q13886 244 aaPredicted RBP15.22■□□□□ 0.03
NUP88-204ENST00000572290 ZNF79Q15937 498 aa15.22■□□□□ 0.03
NUP88-204ENST00000572290 TM4SF20Q53R12 229 aa15.22■□□□□ 0.03
NUP88-204ENST00000572290 SBSPONQ8IVN8 264 aa15.22■□□□□ 0.03
NUP88-204ENST00000572290 SELENOHQ8IZQ5 122 aaKnown RBP15.22■□□□□ 0.03
NUP88-204ENST00000572290 TOMM5Q8N4H5 51 aa15.22■□□□□ 0.03
NUP88-204ENST00000572290 UXS1Q8NBZ7 420 aa15.22■□□□□ 0.03
NUP88-204ENST00000572290 KCNIP3Q9Y2W7 256 aa15.22■□□□□ 0.03
NUP88-204ENST00000572290 U3KQK5 164 aa15.22■□□□□ 0.03
NUP88-204ENST00000572290 ZNF785A8K8V0 405 aa15.21■□□□□ 0.03
NUP88-204ENST00000572290 A8MZ25 164 aa15.21■□□□□ 0.03
NUP88-204ENST00000572290 F8W735 103 aaPredicted RBP15.21■□□□□ 0.03
NUP88-204ENST00000572290 I3L2K1 104 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms