RNA–Protein interactions for RNA: ENST00000571545.1

CIITA-207, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 3

Gene CIITA, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-207ENST00000571545 S4R3C0 116 aa7.33□□□□□ -1.24
CIITA-207ENST00000571545 KMT2CQ8NEZ4 4911 aaKnown RBP7.32□□□□□ -1.24
CIITA-207ENST00000571545 LOC102724200A0A096LPH7 203 aaPredicted RBP7.32□□□□□ -1.24
CIITA-207ENST00000571545 LCE6AA0A183 80 aa7.32□□□□□ -1.24
CIITA-207ENST00000571545 OR2T8A6NH00 312 aa7.32□□□□□ -1.24
CIITA-207ENST00000571545 C15orf62A8K5M9 175 aa7.32□□□□□ -1.24
CIITA-207ENST00000571545 FAM25AB3EWG3 89 aa7.32□□□□□ -1.24
CIITA-207ENST00000571545 FAM25CB3EWG5 89 aa7.32□□□□□ -1.24
CIITA-207ENST00000571545 FAM25GB3EWG6 89 aa7.32□□□□□ -1.24
CIITA-207ENST00000571545 NUPL2O15504 423 aaKnown RBP7.32□□□□□ -1.24
CIITA-207ENST00000571545 SCGB2A1O75556 95 aa7.32□□□□□ -1.24
CIITA-207ENST00000571545 B3GALNT1O75752 331 aa7.32□□□□□ -1.24
CIITA-207ENST00000571545 JTBO76095 146 aa7.32□□□□□ -1.24
CIITA-207ENST00000571545 SCAF4O95104 1147 aaKnown RBP7.32□□□□□ -1.24
CIITA-207ENST00000571545 APOC4P55056 127 aa7.32□□□□□ -1.24
CIITA-207ENST00000571545 ZNF585BQ52M93 769 aa7.32□□□□□ -1.24
CIITA-207ENST00000571545 PHLDA2Q53GA4 152 aa7.32□□□□□ -1.24
CIITA-207ENST00000571545 Q56UQ5 140 aa7.32□□□□□ -1.24
CIITA-207ENST00000571545 RNASE10Q5GAN6 216 aaKnown RBP7.32□□□□□ -1.24
CIITA-207ENST00000571545 TBC1D26Q86UD7 250 aa7.32□□□□□ -1.24
CIITA-207ENST00000571545 SNX29P2Q8IUI4 249 aa7.32□□□□□ -1.24
CIITA-207ENST00000571545 ARRDC1Q8N5I2 433 aa7.32□□□□□ -1.24
CIITA-207ENST00000571545 OR2C3Q8N628 320 aa7.32□□□□□ -1.24
CIITA-207ENST00000571545 DEFB125Q8N687 156 aa7.32□□□□□ -1.24
CIITA-207ENST00000571545 OR10W1Q8NGF6 305 aa7.32□□□□□ -1.24
CIITA-207ENST00000571545 CACNG8Q8WXS5 425 aa7.32□□□□□ -1.24
CIITA-207ENST00000571545 TXN2Q99757 166 aa7.32□□□□□ -1.24
CIITA-207ENST00000571545 FAM110AQ9BQ89 295 aa7.32□□□□□ -1.24
CIITA-207ENST00000571545 DNAH9Q9NYC9 4486 aa7.32□□□□□ -1.24
CIITA-207ENST00000571545 OR4C46A6NHA9 309 aa7.31□□□□□ -1.24
CIITA-207ENST00000571545 K7EMT4 169 aa7.31□□□□□ -1.24
CIITA-207ENST00000571545 CORTO00230 105 aa7.31□□□□□ -1.24
CIITA-207ENST00000571545 TSPAN4O14817 238 aa7.31□□□□□ -1.24
CIITA-207ENST00000571545 CD5P06127 495 aa7.31□□□□□ -1.24
CIITA-207ENST00000571545 FCGR2BP31994 310 aaPredicted RBP7.31□□□□□ -1.24
CIITA-207ENST00000571545 CMC4P56277 68 aaPredicted RBP7.31□□□□□ -1.24
CIITA-207ENST00000571545 RND3P61587 244 aa7.31□□□□□ -1.24
CIITA-207ENST00000571545 VBP1P61758 197 aa7.31□□□□□ -1.24
CIITA-207ENST00000571545 NCS1P62166 190 aa7.31□□□□□ -1.24
CIITA-207ENST00000571545 ERHP84090 104 aaKnown RBP7.31□□□□□ -1.24
CIITA-207ENST00000571545 PRCDQ00LT1 54 aa7.31□□□□□ -1.24
CIITA-207ENST00000571545 TM4SF20Q53R12 229 aa7.31□□□□□ -1.24
CIITA-207ENST00000571545 ZFAND6Q6FIF0 208 aa7.31□□□□□ -1.24
CIITA-207ENST00000571545 UNQ9165/PRO28630Q6UXU0 137 aa7.31□□□□□ -1.24
CIITA-207ENST00000571545 LYSMD2Q8IV50 215 aa7.31□□□□□ -1.24
CIITA-207ENST00000571545 CCDC71LQ8N9Z2 235 aa7.31□□□□□ -1.24
CIITA-207ENST00000571545 ZNF114Q8NC26 417 aa7.31□□□□□ -1.24
CIITA-207ENST00000571545 PDCD10Q9BUL8 212 aa7.31□□□□□ -1.24
CIITA-207ENST00000571545 C6orf62Q9GZU0 229 aaPredicted RBP7.31□□□□□ -1.24
CIITA-207ENST00000571545 RBMY1BA6NDE4 496 aaKnown RBP7.3□□□□□ -1.24
CIITA-207ENST00000571545 RBMY1EA6NEQ0 496 aaKnown RBP7.3□□□□□ -1.24
CIITA-207ENST00000571545 UBE2CO00762 179 aa7.3□□□□□ -1.24
CIITA-207ENST00000571545 HPGDSO60760 199 aa7.3□□□□□ -1.24
CIITA-207ENST00000571545 GABARAPO95166 117 aa7.3□□□□□ -1.24
CIITA-207ENST00000571545 RBMY1DP0C7P1 496 aaKnown RBP7.3□□□□□ -1.24
CIITA-207ENST00000571545 PGAM2P15259 253 aa7.3□□□□□ -1.24
CIITA-207ENST00000571545 ZNF182P17025 639 aaPredicted RBP7.3□□□□□ -1.24
CIITA-207ENST00000571545 ELK1P19419 428 aa7.3□□□□□ -1.24
CIITA-207ENST00000571545 AKR1C2P52895 323 aa7.3□□□□□ -1.24
CIITA-207ENST00000571545 MFAP4P55083 255 aa7.3□□□□□ -1.24
CIITA-207ENST00000571545 MRPS10P82664 201 aaKnown RBP7.3□□□□□ -1.24
CIITA-207ENST00000571545 SSBP1Q04837 148 aaKnown RBP7.3□□□□□ -1.24
CIITA-207ENST00000571545 UBAC2Q8NBM4 344 aa7.3□□□□□ -1.24
CIITA-207ENST00000571545 ZFAND1Q8TCF1 268 aa7.3□□□□□ -1.24
CIITA-207ENST00000571545 SCARB1Q8WTV0 552 aa7.3□□□□□ -1.24
CIITA-207ENST00000571545 SEC22AQ96IW7 307 aa7.3□□□□□ -1.24
CIITA-207ENST00000571545 GINS3Q9BRX5 216 aa7.3□□□□□ -1.24
CIITA-207ENST00000571545 C20orf24Q9BUV8 137 aa7.3□□□□□ -1.24
CIITA-207ENST00000571545 WFDC10AQ9H1F0 79 aa7.3□□□□□ -1.24
CIITA-207ENST00000571545 RABL2AQ9UBK7 228 aaPredicted RBP7.3□□□□□ -1.24
CIITA-207ENST00000571545 RABL2BQ9UNT1 228 aa7.3□□□□□ -1.24
CIITA-207ENST00000571545 TP53TG1Q9Y2A0 90 aa7.3□□□□□ -1.24
CIITA-207ENST00000571545 NSG2Q9Y328 171 aa7.3□□□□□ -1.24
CIITA-207ENST00000571545 IGHV3-35A0A0C4DH35 117 aa7.29□□□□□ -1.24
CIITA-207ENST00000571545 KIR2DL5BA0A0G2JN68 375 aa7.29□□□□□ -1.24
CIITA-207ENST00000571545 KIR2DL5BA0A0G2JPC4 375 aa7.29□□□□□ -1.24
CIITA-207ENST00000571545 K7EIM0 57 aa7.29□□□□□ -1.24
CIITA-207ENST00000571545 GNG7O60262 68 aa7.29□□□□□ -1.24
CIITA-207ENST00000571545 EDN2P20800 178 aa7.29□□□□□ -1.24
CIITA-207ENST00000571545 SNCAP37840 140 aa7.29□□□□□ -1.24
CIITA-207ENST00000571545 NPBWR1P48145 328 aa7.29□□□□□ -1.24
CIITA-207ENST00000571545 SUB1P53999 127 aaKnown RBP eCLIP7.29□□□□□ -1.24
CIITA-207ENST00000571545 TAS2R19P59542 299 aa7.29□□□□□ -1.24
CIITA-207ENST00000571545 HSPE1P61604 102 aaKnown RBP7.29□□□□□ -1.24
CIITA-207ENST00000571545 Q6ZWC4 215 aa7.29□□□□□ -1.24
CIITA-207ENST00000571545 KIR2DL5AQ8N109 375 aa7.29□□□□□ -1.24
CIITA-207ENST00000571545 SLC35G3Q8N808 338 aa7.29□□□□□ -1.24
CIITA-207ENST00000571545 KIR2DL5BQ8NHK3 375 aa7.29□□□□□ -1.24
CIITA-207ENST00000571545 MRGPRFQ96AM1 343 aa7.29□□□□□ -1.24
CIITA-207ENST00000571545 MISP3Q96FF7 219 aa7.29□□□□□ -1.24
CIITA-207ENST00000571545 RETNQ9HD89 108 aa7.29□□□□□ -1.24
CIITA-207ENST00000571545 COPZ2Q9P299 210 aa7.29□□□□□ -1.24
CIITA-207ENST00000571545 CACFD1Q9UGQ2 172 aa7.29□□□□□ -1.24
CIITA-207ENST00000571545 INS-IGF2F8WCM5 200 aa7.28□□□□□ -1.24
CIITA-207ENST00000571545 LORP23490 312 aaPredicted RBP7.28□□□□□ -1.24
CIITA-207ENST00000571545 PIGPP57054 158 aa7.28□□□□□ -1.24
CIITA-207ENST00000571545 PAFAH1B2P68402 229 aa7.28□□□□□ -1.24
CIITA-207ENST00000571545 MEF2DQ14814 521 aa7.28□□□□□ -1.24
CIITA-207ENST00000571545 GPR107Q5VW38 600 aa7.28□□□□□ -1.24
CIITA-207ENST00000571545 LHFPL1Q86WI0 220 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms