RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 TMEM68Q96MH6 324 aa10.32□□□□□ -0.76
CCDC40-205ENST00000571028 PDCD10Q9BUL8 212 aa10.32□□□□□ -0.76
CCDC40-205ENST00000571028 DYNC2H1Q8NCM8 4307 aaKnown RBP10.31□□□□□ -0.76
CCDC40-205ENST00000571028 ST8SIA3O43173 380 aa10.31□□□□□ -0.76
CCDC40-205ENST00000571028 IGLV1-40P01703 118 aa10.31□□□□□ -0.76
CCDC40-205ENST00000571028 P0C879 139 aa10.31□□□□□ -0.76
CCDC40-205ENST00000571028 DEFA4P12838 97 aa10.31□□□□□ -0.76
CCDC40-205ENST00000571028 DHRS2Q13268 280 aa10.31□□□□□ -0.76
CCDC40-205ENST00000571028 TTC9CQ8N5M4 171 aa10.31□□□□□ -0.76
CCDC40-205ENST00000571028 COQ8AQ8NI60 647 aa10.31□□□□□ -0.76
CCDC40-205ENST00000571028 DUX3Q96PT4 197 aa10.31□□□□□ -0.76
CCDC40-205ENST00000571028 TMEM14BQ9NUH8 114 aa10.31□□□□□ -0.76
CCDC40-205ENST00000571028 A0A0B4J2A0 478 aa10.3□□□□□ -0.76
CCDC40-205ENST00000571028 ADAP1O75689 374 aa10.3□□□□□ -0.76
CCDC40-205ENST00000571028 OR2J3O76001 311 aa10.3□□□□□ -0.76
CCDC40-205ENST00000571028 SPNP16150 400 aa10.3□□□□□ -0.76
CCDC40-205ENST00000571028 PSMB6P28072 239 aa10.3□□□□□ -0.76
CCDC40-205ENST00000571028 HOXA1P49639 335 aaPredicted RBP10.3□□□□□ -0.76
CCDC40-205ENST00000571028 HSPE1P61604 102 aaKnown RBP10.3□□□□□ -0.76
CCDC40-205ENST00000571028 PLET1Q6UQ28 207 aa10.3□□□□□ -0.76
CCDC40-205ENST00000571028 C8orf86Q6ZUL3 223 aa10.3□□□□□ -0.76
CCDC40-205ENST00000571028 FAM219AQ8IW50 185 aa10.3□□□□□ -0.76
CCDC40-205ENST00000571028 OR5B3Q8NH48 314 aa10.3□□□□□ -0.76
CCDC40-205ENST00000571028 OR1S1Q8NH92 325 aa10.3□□□□□ -0.76
CCDC40-205ENST00000571028 LSM10Q969L4 123 aaKnown RBP10.3□□□□□ -0.76
CCDC40-205ENST00000571028 GNB4Q9HAV0 340 aa10.3□□□□□ -0.76
CCDC40-205ENST00000571028 PLEKHA3Q9HB20 300 aa10.3□□□□□ -0.76
CCDC40-205ENST00000571028 ENY2Q9NPA8 101 aa10.3□□□□□ -0.76
CCDC40-205ENST00000571028 NDUFA4L2Q9NRX3 87 aa10.3□□□□□ -0.76
CCDC40-205ENST00000571028 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.3□□□□□ -0.76
CCDC40-205ENST00000571028 ZFP57Q9NU63 452 aa10.3□□□□□ -0.76
CCDC40-205ENST00000571028 SHPKQ9UHJ6 478 aa10.3□□□□□ -0.76
CCDC40-205ENST00000571028 STAB2Q8WWQ8 2551 aa10.29□□□□□ -0.76
CCDC40-205ENST00000571028 C13orf42A0A1B0GVH6 325 aa10.29□□□□□ -0.76
CCDC40-205ENST00000571028 IGLC7A0M8Q6 106 aa10.29□□□□□ -0.76
CCDC40-205ENST00000571028 FGF2P09038 288 aa10.29□□□□□ -0.76
CCDC40-205ENST00000571028 SULT1A3P0DMM9 295 aa10.29□□□□□ -0.76
CCDC40-205ENST00000571028 SULT1A4P0DMN0 295 aa10.29□□□□□ -0.76
CCDC40-205ENST00000571028 RHOGP84095 191 aa10.29□□□□□ -0.76
CCDC40-205ENST00000571028 WT1-ASQ06250 92 aa10.29□□□□□ -0.76
CCDC40-205ENST00000571028 DEFB136Q30KP8 78 aa10.29□□□□□ -0.76
CCDC40-205ENST00000571028 GGNBP1Q5YKI7 109 aa10.29□□□□□ -0.76
CCDC40-205ENST00000571028 THOC7Q6I9Y2 204 aaKnown RBP10.29□□□□□ -0.76
CCDC40-205ENST00000571028 SLC25A24Q6NUK1 477 aa10.29□□□□□ -0.76
CCDC40-205ENST00000571028 CADM3Q8N126 398 aa10.29□□□□□ -0.76
CCDC40-205ENST00000571028 ZNF491Q8N8L2 437 aa10.29□□□□□ -0.76
CCDC40-205ENST00000571028 PRR25Q96S07 402 aa10.29□□□□□ -0.76
CCDC40-205ENST00000571028 ALX4Q9H161 411 aaPredicted RBP10.29□□□□□ -0.76
CCDC40-205ENST00000571028 FBXL7Q9UJT9 491 aa10.29□□□□□ -0.76
CCDC40-205ENST00000571028 ZNF257Q9Y2Q1 563 aa10.29□□□□□ -0.76
CCDC40-205ENST00000571028 LSM4Q9Y4Z0 139 aaKnown RBP10.29□□□□□ -0.76
CCDC40-205ENST00000571028 S4R3C0 116 aa10.29□□□□□ -0.76
CCDC40-205ENST00000571028 TNCP24821 2201 aa10.28□□□□□ -0.76
CCDC40-205ENST00000571028 ANKRD34BA5PLL1 514 aa10.28□□□□□ -0.76
CCDC40-205ENST00000571028 NPIPB5A8MRT5 1133 aa10.28□□□□□ -0.76
CCDC40-205ENST00000571028 CEBPZOSA8MTT3 80 aa10.28□□□□□ -0.76
CCDC40-205ENST00000571028 INMT-MINDY4F8WBC2 141 aa10.28□□□□□ -0.76
CCDC40-205ENST00000571028 IGHV3-23P01764 117 aa10.28□□□□□ -0.76
CCDC40-205ENST00000571028 PRCDQ00LT1 54 aa10.28□□□□□ -0.76
CCDC40-205ENST00000571028 KIAA0141Q14154 515 aaPredicted RBP10.28□□□□□ -0.76
CCDC40-205ENST00000571028 SMCO1Q147U7 214 aa10.28□□□□□ -0.76
CCDC40-205ENST00000571028 ETV3LQ6ZN32 361 aa10.28□□□□□ -0.76
CCDC40-205ENST00000571028 RNF152Q8N8N0 203 aa10.28□□□□□ -0.76
CCDC40-205ENST00000571028 ZNF431Q8TF32 576 aaPredicted RBP10.28□□□□□ -0.76
CCDC40-205ENST00000571028 RCHY1Q96PM5 261 aa10.28□□□□□ -0.76
CCDC40-205ENST00000571028 KRTAP17-1Q9BYP8 105 aa10.28□□□□□ -0.76
CCDC40-205ENST00000571028 SLA2Q9H6Q3 261 aa10.28□□□□□ -0.76
CCDC40-205ENST00000571028 IGHV3-21A0A0B4J1V1 117 aa10.27□□□□□ -0.77
CCDC40-205ENST00000571028 DUXBA0A1W2PPF3 345 aa10.27□□□□□ -0.77
CCDC40-205ENST00000571028 FAM25EA8MYX2 175 aa10.27□□□□□ -0.77
CCDC40-205ENST00000571028 H3BUA1 57 aa10.27□□□□□ -0.77
CCDC40-205ENST00000571028 CCSO14618 274 aa10.27□□□□□ -0.77
CCDC40-205ENST00000571028 NDUFB8O95169 186 aa10.27□□□□□ -0.77
CCDC40-205ENST00000571028 DHFRP00374 187 aa10.27□□□□□ -0.77
CCDC40-205ENST00000571028 IFNA21P01568 189 aa10.27□□□□□ -0.77
CCDC40-205ENST00000571028 CTRB1P17538 263 aa10.27□□□□□ -0.77
CCDC40-205ENST00000571028 MYCNOSP40205 109 aa10.27□□□□□ -0.77
CCDC40-205ENST00000571028 CDX1P47902 265 aaPredicted RBP10.27□□□□□ -0.77
CCDC40-205ENST00000571028 ERHP84090 104 aaKnown RBP10.27□□□□□ -0.77
CCDC40-205ENST00000571028 ATP5G2Q06055 141 aa10.27□□□□□ -0.77
CCDC40-205ENST00000571028 NMSQ5H8A3 153 aa10.27□□□□□ -0.77
CCDC40-205ENST00000571028 CTRB2Q6GPI1 263 aa10.27□□□□□ -0.77
CCDC40-205ENST00000571028 ZNF429Q86V71 674 aa10.27□□□□□ -0.77
CCDC40-205ENST00000571028 LRTM2Q8N967 370 aa10.27□□□□□ -0.77
CCDC40-205ENST00000571028 DUSP18Q8NEJ0 188 aa10.27□□□□□ -0.77
CCDC40-205ENST00000571028 UBE2E2Q96LR5 201 aa10.27□□□□□ -0.77
CCDC40-205ENST00000571028 SRSF8Q9BRL6 282 aaKnown RBP10.27□□□□□ -0.77
CCDC40-205ENST00000571028 PIGBOS1A0A0B4J2F0 54 aa10.26□□□□□ -0.77
CCDC40-205ENST00000571028 A0A1B0GU03 582 aa10.26□□□□□ -0.77
CCDC40-205ENST00000571028 MPTX1A8MV57 137 aa10.26□□□□□ -0.77
CCDC40-205ENST00000571028 CRYGCP07315 174 aa10.26□□□□□ -0.77
CCDC40-205ENST00000571028 SNCAP37840 140 aa10.26□□□□□ -0.77
CCDC40-205ENST00000571028 SPCS3P61009 180 aa10.26□□□□□ -0.77
CCDC40-205ENST00000571028 ZFAND6Q6FIF0 208 aa10.26□□□□□ -0.77
CCDC40-205ENST00000571028 HSD17B13Q7Z5P4 300 aaPredicted RBP10.26□□□□□ -0.77
CCDC40-205ENST00000571028 C12orf45Q8N5I9 185 aaPredicted RBP10.26□□□□□ -0.77
CCDC40-205ENST00000571028 OR2C3Q8N628 320 aa10.26□□□□□ -0.77
CCDC40-205ENST00000571028 MITD1Q8WV92 249 aa10.26□□□□□ -0.77
CCDC40-205ENST00000571028 C4orf3Q8WVX3 66 aa10.26□□□□□ -0.77
CCDC40-205ENST00000571028 MISP3Q96FF7 219 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms