RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 SFXN4Q6P4A7 337 aa8.82□□□□□ -1
CAPN3-220ENST00000569827 FAM24BQ8N5W8 94 aa8.82□□□□□ -1
CAPN3-220ENST00000569827 OR1L8Q8NGR8 309 aa8.82□□□□□ -1
CAPN3-220ENST00000569827 GIMAP1Q8WWP7 306 aa8.82□□□□□ -1
CAPN3-220ENST00000569827 NDUFA4L2Q9NRX3 87 aa8.82□□□□□ -1
CAPN3-220ENST00000569827 ETV7Q9Y603 341 aa8.82□□□□□ -1
CAPN3-220ENST00000569827 MARCH11A6NNE9 402 aa8.81□□□□□ -1
CAPN3-220ENST00000569827 NUPL2O15504 423 aaKnown RBP8.81□□□□□ -1
CAPN3-220ENST00000569827 KRASP01116 189 aa8.81□□□□□ -1
CAPN3-220ENST00000569827 IFNA4P05014 189 aa8.81□□□□□ -1
CAPN3-220ENST00000569827 CTSGP08311 255 aa8.81□□□□□ -1
CAPN3-220ENST00000569827 PSMB9P28065 219 aa8.81□□□□□ -1
CAPN3-220ENST00000569827 LPAR6P43657 344 aa8.81□□□□□ -1
CAPN3-220ENST00000569827 ERVK-16P61578 105 aa8.81□□□□□ -1
CAPN3-220ENST00000569827 SPSB3Q6PJ21 355 aa8.81□□□□□ -1
CAPN3-220ENST00000569827 HOGA1Q86XE5 327 aa8.81□□□□□ -1
CAPN3-220ENST00000569827 TMEM116Q8NCL8 245 aa8.81□□□□□ -1
CAPN3-220ENST00000569827 C2CD4CQ8TF44 421 aa8.81□□□□□ -1
CAPN3-220ENST00000569827 FCAMRQ8WWV6 532 aa8.81□□□□□ -1
CAPN3-220ENST00000569827 LSM10Q969L4 123 aaKnown RBP8.81□□□□□ -1
CAPN3-220ENST00000569827 MISP3Q96FF7 219 aa8.81□□□□□ -1
CAPN3-220ENST00000569827 SRSF8Q9BRL6 282 aaKnown RBP8.81□□□□□ -1
CAPN3-220ENST00000569827 C6orf62Q9GZU0 229 aaPredicted RBP8.81□□□□□ -1
CAPN3-220ENST00000569827 C11orf68Q9H3H3 251 aaKnown RBP8.81□□□□□ -1
CAPN3-220ENST00000569827 PLEKHA2Q9HB19 425 aa8.81□□□□□ -1
CAPN3-220ENST00000569827 APLNQ9ULZ1 77 aa8.81□□□□□ -1
CAPN3-220ENST00000569827 OR51B2Q9Y5P1 312 aa8.81□□□□□ -1
CAPN3-220ENST00000569827 C15orf62A8K5M9 175 aa8.8□□□□□ -1
CAPN3-220ENST00000569827 K7EMT4 169 aa8.8□□□□□ -1
CAPN3-220ENST00000569827 APOHP02749 345 aaPredicted RBP8.8□□□□□ -1
CAPN3-220ENST00000569827 GNRHRP30968 328 aa8.8□□□□□ -1
CAPN3-220ENST00000569827 SDC2P34741 201 aa8.8□□□□□ -1
CAPN3-220ENST00000569827 HERV-K104P61576 105 aa8.8□□□□□ -1
CAPN3-220ENST00000569827 MSMO1Q15800 293 aa8.8□□□□□ -1
CAPN3-220ENST00000569827 IDNKQ5T6J7 187 aa8.8□□□□□ -1
CAPN3-220ENST00000569827 IZUMO2Q6UXV1 221 aa8.8□□□□□ -1
CAPN3-220ENST00000569827 TCF24Q7RTU0 167 aa8.8□□□□□ -1
CAPN3-220ENST00000569827 LILRB2Q8N423 598 aa8.8□□□□□ -1
CAPN3-220ENST00000569827 ZBTB34Q8NCN2 500 aa8.8□□□□□ -1
CAPN3-220ENST00000569827 ST8SIA2Q92186 375 aa8.8□□□□□ -1
CAPN3-220ENST00000569827 SLC25A46Q96AG3 418 aa8.8□□□□□ -1
CAPN3-220ENST00000569827 AIFM2Q9BRQ8 373 aa8.8□□□□□ -1
CAPN3-220ENST00000569827 MFFQ9GZY8 342 aa8.8□□□□□ -1
CAPN3-220ENST00000569827 EHFQ9NZC4 300 aa8.8□□□□□ -1
CAPN3-220ENST00000569827 COMMD9Q9P000 198 aa8.8□□□□□ -1
CAPN3-220ENST00000569827 CYB5BO43169 146 aa8.79□□□□□ -1
CAPN3-220ENST00000569827 SCGNO76038 276 aa8.79□□□□□ -1
CAPN3-220ENST00000569827 DEFB131AP59861 70 aa8.79□□□□□ -1
CAPN3-220ENST00000569827 SPINK9Q5DT21 86 aa8.79□□□□□ -1
CAPN3-220ENST00000569827 FAM90A2PQ658T7 463 aa8.79□□□□□ -1
CAPN3-220ENST00000569827 ZNF767PQ75MW2 155 aa8.79□□□□□ -1
CAPN3-220ENST00000569827 PINX1Q96BK5 328 aaKnown RBP8.79□□□□□ -1
CAPN3-220ENST00000569827 FXYD6Q9H0Q3 95 aa8.79□□□□□ -1
CAPN3-220ENST00000569827 AUNIPQ9H7T9 357 aa8.79□□□□□ -1
CAPN3-220ENST00000569827 HSPG2P98160 4391 aa8.79□□□□□ -1
CAPN3-220ENST00000569827 NACAE9PAV3 2078 aa8.78□□□□□ -1
CAPN3-220ENST00000569827 IGHV4-28A0A0C4DH34 117 aa8.78□□□□□ -1
CAPN3-220ENST00000569827 ERICH4A6NGS2 130 aa8.78□□□□□ -1
CAPN3-220ENST00000569827 PGLYRP1O75594 196 aaPredicted RBP8.78□□□□□ -1
CAPN3-220ENST00000569827 PMP2P02689 132 aa8.78□□□□□ -1
CAPN3-220ENST00000569827 RBMY1A1P0DJD3 496 aaKnown RBP8.78□□□□□ -1
CAPN3-220ENST00000569827 RBMY1CP0DJD4 496 aa8.78□□□□□ -1
CAPN3-220ENST00000569827 F2RP25116 425 aa8.78□□□□□ -1
CAPN3-220ENST00000569827 RFX2P48378 723 aa8.78□□□□□ -1
CAPN3-220ENST00000569827 TMEM187Q14656 261 aa8.78□□□□□ -1
CAPN3-220ENST00000569827 RBMY1FQ15415 496 aaKnown RBP8.78□□□□□ -1
CAPN3-220ENST00000569827 THOC7Q6I9Y2 204 aaKnown RBP8.78□□□□□ -1
CAPN3-220ENST00000569827 Q8NAQ8 132 aa8.78□□□□□ -1
CAPN3-220ENST00000569827 OR5AP2Q8NGF4 316 aa8.78□□□□□ -1
CAPN3-220ENST00000569827 ZNF2Q9BSG1 426 aaPredicted RBP8.78□□□□□ -1
CAPN3-220ENST00000569827 SCRT1Q9BWW7 348 aa8.78□□□□□ -1
CAPN3-220ENST00000569827 ABCA13Q86UQ4 5058 aa8.78□□□□□ -1
CAPN3-220ENST00000569827 TRAV14DV4A0A0A6YYC5 116 aa8.77□□□□□ -1.01
CAPN3-220ENST00000569827 LOC100506127A0A0U1RQW1 187 aa8.77□□□□□ -1.01
CAPN3-220ENST00000569827 I3L2K1 104 aa8.77□□□□□ -1.01
CAPN3-220ENST00000569827 ST8SIA3O43173 380 aa8.77□□□□□ -1.01
CAPN3-220ENST00000569827 SNAPC5O75971 98 aa8.77□□□□□ -1.01
CAPN3-220ENST00000569827 DFFBO76075 338 aa8.77□□□□□ -1.01
CAPN3-220ENST00000569827 MT-CO2P00403 227 aa8.77□□□□□ -1.01
CAPN3-220ENST00000569827 C4BPBP20851 252 aa8.77□□□□□ -1.01
CAPN3-220ENST00000569827 HLA-DMBP28068 263 aa8.77□□□□□ -1.01
CAPN3-220ENST00000569827 FGF9P31371 208 aaPredicted RBP8.77□□□□□ -1.01
CAPN3-220ENST00000569827 RPL11P62913 178 aaKnown RBP8.77□□□□□ -1.01
CAPN3-220ENST00000569827 IZUMO4Q1ZYL8 232 aa8.77□□□□□ -1.01
CAPN3-220ENST00000569827 PHLDA2Q53GA4 152 aa8.77□□□□□ -1.01
CAPN3-220ENST00000569827 UBE2UQ5VVX9 321 aa8.77□□□□□ -1.01
CAPN3-220ENST00000569827 Q6ZTC4 211 aa8.77□□□□□ -1.01
CAPN3-220ENST00000569827 HSD17B13Q7Z5P4 300 aaPredicted RBP8.77□□□□□ -1.01
CAPN3-220ENST00000569827 MS4A6AQ9H2W1 248 aa8.77□□□□□ -1.01
CAPN3-220ENST00000569827 IFT46Q9NQC8 304 aa8.77□□□□□ -1.01
CAPN3-220ENST00000569827 CLEC5AQ9NY25 188 aa8.77□□□□□ -1.01
CAPN3-220ENST00000569827 BLOC1S6Q9UL45 172 aa8.77□□□□□ -1.01
CAPN3-220ENST00000569827 C15orf61A6NNL5 157 aa8.76□□□□□ -1.01
CAPN3-220ENST00000569827 KNCNA6PVL3 124 aa8.76□□□□□ -1.01
CAPN3-220ENST00000569827 M0R2N4 97 aa8.76□□□□□ -1.01
CAPN3-220ENST00000569827 DNASE2O00115 360 aaPredicted RBP8.76□□□□□ -1.01
CAPN3-220ENST00000569827 MRPS14O60783 128 aaKnown RBP8.76□□□□□ -1.01
CAPN3-220ENST00000569827 GIG44P09565 113 aaPredicted RBP8.76□□□□□ -1.01
CAPN3-220ENST00000569827 TGFBR1P36897 503 aa8.76□□□□□ -1.01
CAPN3-220ENST00000569827 MFAP4P55083 255 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms