RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 RPL27AP46776 148 aaKnown RBP18■□□□□ 0.47
VCPKMT-205ENST00000569518 TMEM41BQ5BJD5 291 aa18■□□□□ 0.47
VCPKMT-205ENST00000569518 ACSM6Q6P461 480 aa18■□□□□ 0.47
VCPKMT-205ENST00000569518 SPSB3Q6PJ21 355 aa18■□□□□ 0.47
VCPKMT-205ENST00000569518 BPIFCQ8NFQ6 507 aa18■□□□□ 0.47
VCPKMT-205ENST00000569518 OR2T10Q8NGZ9 312 aa18■□□□□ 0.47
VCPKMT-205ENST00000569518 SMCO3A2RU48 225 aa18■□□□□ 0.47
VCPKMT-205ENST00000569518 AGPAT2O15120 278 aa18■□□□□ 0.47
VCPKMT-205ENST00000569518 NPFFO15130 113 aa18■□□□□ 0.47
VCPKMT-205ENST00000569518 MSMBP08118 114 aa18■□□□□ 0.47
VCPKMT-205ENST00000569518 HNF4GQ14541 408 aa18■□□□□ 0.47
VCPKMT-205ENST00000569518 PIP4P2Q8N4L2 257 aa18■□□□□ 0.47
VCPKMT-205ENST00000569518 FCN1O00602 326 aa17.99■□□□□ 0.47
VCPKMT-205ENST00000569518 ACTL6BO94805 426 aa17.99■□□□□ 0.47
VCPKMT-205ENST00000569518 H2AFB1P0C5Y9 115 aa17.99■□□□□ 0.47
VCPKMT-205ENST00000569518 OR13C7P0DN81 318 aa17.99■□□□□ 0.47
VCPKMT-205ENST00000569518 ELLP55199 621 aaPredicted RBP17.99■□□□□ 0.47
VCPKMT-205ENST00000569518 SCRT1Q9BWW7 348 aa17.99■□□□□ 0.47
VCPKMT-205ENST00000569518 BEX4Q9NWD9 120 aaPredicted RBP17.99■□□□□ 0.47
VCPKMT-205ENST00000569518 ABCA12Q86UK0 2595 aa17.98■□□□□ 0.47
VCPKMT-205ENST00000569518 ZNF726P1Q15940 193 aa17.98■□□□□ 0.47
VCPKMT-205ENST00000569518 ZNF709Q8N972 641 aa17.98■□□□□ 0.47
VCPKMT-205ENST00000569518 P2RX4Q99571 388 aa17.98■□□□□ 0.47
VCPKMT-205ENST00000569518 MGST2Q99735 147 aa17.98■□□□□ 0.47
VCPKMT-205ENST00000569518 NPVFQ9HCQ7 196 aa17.98■□□□□ 0.47
VCPKMT-205ENST00000569518 TRAV1-1A0A0B4J248 108 aa17.98■□□□□ 0.47
VCPKMT-205ENST00000569518 TEX22C9J3V5 150 aa17.98■□□□□ 0.47
VCPKMT-205ENST00000569518 C17orf112F2Z3M2 114 aa17.98■□□□□ 0.47
VCPKMT-205ENST00000569518 AKR1C1Q04828 323 aa17.98■□□□□ 0.47
VCPKMT-205ENST00000569518 PVRIGQ6DKI7 326 aa17.98■□□□□ 0.47
VCPKMT-205ENST00000569518 ZNF114Q8NC26 417 aa17.98■□□□□ 0.47
VCPKMT-205ENST00000569518 LFNGQ8NES3 379 aa17.98■□□□□ 0.47
VCPKMT-205ENST00000569518 RCC1LQ96I51 464 aaKnown RBP17.98■□□□□ 0.47
VCPKMT-205ENST00000569518 CD5P06127 495 aa17.97■□□□□ 0.47
VCPKMT-205ENST00000569518 RAB2AP61019 212 aa17.97■□□□□ 0.47
VCPKMT-205ENST00000569518 GNB1P62873 340 aa17.97■□□□□ 0.47
VCPKMT-205ENST00000569518 HES1Q14469 280 aa17.97■□□□□ 0.47
VCPKMT-205ENST00000569518 MRPL41Q8IXM3 137 aaKnown RBP17.97■□□□□ 0.47
VCPKMT-205ENST00000569518 FAM96BQ9Y3D0 163 aa17.97■□□□□ 0.47
VCPKMT-205ENST00000569518 DOPEY2Q9Y3R5 2298 aa17.97■□□□□ 0.47
VCPKMT-205ENST00000569518 BTBD17A6NE02 478 aa17.96■□□□□ 0.47
VCPKMT-205ENST00000569518 B4DSR2 109 aa17.96■□□□□ 0.47
VCPKMT-205ENST00000569518 CCL20P78556 96 aa17.96■□□□□ 0.47
VCPKMT-205ENST00000569518 PLGLAQ15195 96 aa17.96■□□□□ 0.47
VCPKMT-205ENST00000569518 SSX7Q7RTT5 188 aa17.96■□□□□ 0.47
VCPKMT-205ENST00000569518 MBD3L1Q8WWY6 194 aa17.96■□□□□ 0.47
VCPKMT-205ENST00000569518 SRSF12Q8WXF0 261 aaKnown RBP17.96■□□□□ 0.47
VCPKMT-205ENST00000569518 PSMG3-AS1Q96PY0 264 aa17.96■□□□□ 0.47
VCPKMT-205ENST00000569518 GGTLC1Q9BX51 225 aa17.96■□□□□ 0.47
VCPKMT-205ENST00000569518 KIAA1456Q9P272 454 aa17.96■□□□□ 0.47
VCPKMT-205ENST00000569518 AREGP15514 252 aa17.95■□□□□ 0.46
VCPKMT-205ENST00000569518 CD69Q07108 199 aa17.95■□□□□ 0.46
VCPKMT-205ENST00000569518 C5orf64Q2M2E5 130 aa17.95■□□□□ 0.46
VCPKMT-205ENST00000569518 DEFB113Q30KQ7 82 aa17.95■□□□□ 0.46
VCPKMT-205ENST00000569518 FFAR4Q5NUL3 377 aa17.95■□□□□ 0.46
VCPKMT-205ENST00000569518 RPP25LQ8N5L8 163 aaKnown RBP17.95■□□□□ 0.46
VCPKMT-205ENST00000569518 RNASEH2CQ8TDP1 164 aaKnown RBP17.95■□□□□ 0.46
VCPKMT-205ENST00000569518 SFT2D1Q8WV19 159 aa17.95■□□□□ 0.46
VCPKMT-205ENST00000569518 TMEM231Q9H6L2 316 aa17.95■□□□□ 0.46
VCPKMT-205ENST00000569518 CSMD2Q7Z408 3487 aa17.95■□□□□ 0.46
VCPKMT-205ENST00000569518 IGHV1-69DA0A0B4J2H0 117 aa17.95■□□□□ 0.46
VCPKMT-205ENST00000569518 A0A1B0GV50 99 aa17.95■□□□□ 0.46
VCPKMT-205ENST00000569518 TMEM218A2RU14 115 aa17.95■□□□□ 0.46
VCPKMT-205ENST00000569518 SOX15O60248 233 aa17.95■□□□□ 0.46
VCPKMT-205ENST00000569518 IGHV1-69P01742 117 aa17.95■□□□□ 0.46
VCPKMT-205ENST00000569518 MBP02144 154 aa17.95■□□□□ 0.46
VCPKMT-205ENST00000569518 OPRK1P41145 380 aa17.95■□□□□ 0.46
VCPKMT-205ENST00000569518 SUB1P53999 127 aaKnown RBP eCLIP17.95■□□□□ 0.46
VCPKMT-205ENST00000569518 TEPPQ6URK8 271 aa17.95■□□□□ 0.46
VCPKMT-205ENST00000569518 LRRC75A-AS1Q8N1F1 130 aa17.95■□□□□ 0.46
VCPKMT-205ENST00000569518 CACNG8Q8WXS5 425 aa17.95■□□□□ 0.46
VCPKMT-205ENST00000569518 MAP1AP78559 2803 aaPredicted RBP17.94■□□□□ 0.46
VCPKMT-205ENST00000569518 HELZ2Q9BYK8 2649 aaKnown RBP17.94■□□□□ 0.46
VCPKMT-205ENST00000569518 REG1AP05451 166 aa17.94■□□□□ 0.46
VCPKMT-205ENST00000569518 GPX4P36969 197 aaPredicted RBP17.94■□□□□ 0.46
VCPKMT-205ENST00000569518 GAMTQ14353 236 aa17.94■□□□□ 0.46
VCPKMT-205ENST00000569518 NARS2Q96I59 477 aaKnown RBP17.94■□□□□ 0.46
VCPKMT-205ENST00000569518 SRSF8Q9BRL6 282 aaKnown RBP17.94■□□□□ 0.46
VCPKMT-205ENST00000569518 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.94■□□□□ 0.464e-7■■■■■ 43.8
VCPKMT-205ENST00000569518 NAV2Q8IVL1 2488 aa17.94■□□□□ 0.46
VCPKMT-205ENST00000569518 HBE1P02100 147 aa17.93■□□□□ 0.46
VCPKMT-205ENST00000569518 TMEM144Q7Z5S9 345 aa17.93■□□□□ 0.46
VCPKMT-205ENST00000569518 BRS3P32247 399 aa17.93■□□□□ 0.46
VCPKMT-205ENST00000569518 MFAP2P55001 183 aa17.93■□□□□ 0.46
VCPKMT-205ENST00000569518 MLANAQ16655 118 aa17.93■□□□□ 0.46
VCPKMT-205ENST00000569518 GUK1Q16774 197 aa17.93■□□□□ 0.46
VCPKMT-205ENST00000569518 FAM120AOSQ5T036 256 aa17.93■□□□□ 0.46
VCPKMT-205ENST00000569518 SLC16A13Q7RTY0 426 aa17.93■□□□□ 0.46
VCPKMT-205ENST00000569518 FNDC4Q9H6D8 234 aaPredicted RBP17.93■□□□□ 0.46
VCPKMT-205ENST00000569518 TREM1Q9NP99 234 aa17.93■□□□□ 0.46
VCPKMT-205ENST00000569518 APCP25054 2843 aa17.93■□□□□ 0.46
VCPKMT-205ENST00000569518 TRAV20A0A0B4J274 112 aa17.92■□□□□ 0.46
VCPKMT-205ENST00000569518 TRAV40A0A0B4J280 105 aa17.92■□□□□ 0.46
VCPKMT-205ENST00000569518 C9JQL5 133 aa17.92■□□□□ 0.46
VCPKMT-205ENST00000569518 FAM106CPP0CH98 169 aa17.92■□□□□ 0.46
VCPKMT-205ENST00000569518 TMEM11P17152 192 aa17.92■□□□□ 0.46
VCPKMT-205ENST00000569518 M6PRP20645 277 aa17.92■□□□□ 0.46
VCPKMT-205ENST00000569518 RUSC1-AS1Q66K80 236 aa17.92■□□□□ 0.46
VCPKMT-205ENST00000569518 OR10G4Q8NGN3 311 aa17.92■□□□□ 0.46
VCPKMT-205ENST00000569518 OR10G9Q8NGN4 311 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms