RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 SRXN1Q9BYN0 137 aa4.5□□□□□ -1.69
LINC01541-202ENST00000568095 KCNIP1Q9NZI2 227 aa4.5□□□□□ -1.69
LINC01541-202ENST00000568095 LSM4Q9Y4Z0 139 aaKnown RBP4.5□□□□□ -1.69
LINC01541-202ENST00000568095 AHCTF1Q8WYP5 2266 aa4.5□□□□□ -1.69
LINC01541-202ENST00000568095 SMG1Q96Q15 3661 aaKnown RBP4.5□□□□□ -1.69
LINC01541-202ENST00000568095 IGHV3-15A0A0B4J1V0 119 aa4.5□□□□□ -1.69
LINC01541-202ENST00000568095 TRAPPC2LH3BP13 241 aa4.5□□□□□ -1.69
LINC01541-202ENST00000568095 ISLRO14498 428 aa4.5□□□□□ -1.69
LINC01541-202ENST00000568095 IGLV2-8P01709 118 aa4.5□□□□□ -1.69
LINC01541-202ENST00000568095 RFPL3SP0C7P2 107 aa4.5□□□□□ -1.69
LINC01541-202ENST00000568095 PSG1P11464 419 aa4.5□□□□□ -1.69
LINC01541-202ENST00000568095 GCHFRP30047 84 aa4.5□□□□□ -1.69
LINC01541-202ENST00000568095 RPL31P62899 125 aaKnown RBP4.5□□□□□ -1.69
LINC01541-202ENST00000568095 SPATA12Q7Z6I5 190 aa4.5□□□□□ -1.69
LINC01541-202ENST00000568095 WFDC12Q8WWY7 111 aa4.5□□□□□ -1.69
LINC01541-202ENST00000568095 NUDT11Q96G61 164 aa4.5□□□□□ -1.69
LINC01541-202ENST00000568095 ATP6V0BQ99437 205 aa4.5□□□□□ -1.69
LINC01541-202ENST00000568095 MGST2Q99735 147 aa4.5□□□□□ -1.69
LINC01541-202ENST00000568095 OR2D2Q9H210 308 aa4.5□□□□□ -1.69
LINC01541-202ENST00000568095 ST20Q9HBF5 79 aa4.5□□□□□ -1.69
LINC01541-202ENST00000568095 DKK4Q9UBT3 224 aa4.5□□□□□ -1.69
LINC01541-202ENST00000568095 NAT8BQ9UHF3 227 aa4.5□□□□□ -1.69
LINC01541-202ENST00000568095 FAM186AA6NE01 2351 aa4.49□□□□□ -1.69
LINC01541-202ENST00000568095 TRAV34A0A0B4J273 112 aa4.49□□□□□ -1.69
LINC01541-202ENST00000568095 A0A0J9YW62 118 aa4.49□□□□□ -1.69
LINC01541-202ENST00000568095 FAM90A9PA6NNJ1 464 aa4.49□□□□□ -1.69
LINC01541-202ENST00000568095 SYNGR1O43759 233 aa4.49□□□□□ -1.69
LINC01541-202ENST00000568095 OR2J3O76001 311 aa4.49□□□□□ -1.69
LINC01541-202ENST00000568095 PMCHP20382 165 aa4.49□□□□□ -1.69
LINC01541-202ENST00000568095 SRIP30626 198 aa4.49□□□□□ -1.69
LINC01541-202ENST00000568095 CEACAM3P40198 252 aa4.49□□□□□ -1.69
LINC01541-202ENST00000568095 GABRA2P47869 451 aa4.49□□□□□ -1.69
LINC01541-202ENST00000568095 GPM6AP51674 278 aa4.49□□□□□ -1.69
LINC01541-202ENST00000568095 PRAMEF20Q5VT98 475 aa4.49□□□□□ -1.69
LINC01541-202ENST00000568095 UFSP1Q6NVU6 142 aa4.49□□□□□ -1.69
LINC01541-202ENST00000568095 TREML4Q6UXN2 200 aa4.49□□□□□ -1.69
LINC01541-202ENST00000568095 BORCS7Q96B45 105 aa4.49□□□□□ -1.69
LINC01541-202ENST00000568095 MBD6Q96DN6 1003 aa4.49□□□□□ -1.69
LINC01541-202ENST00000568095 POM121L2Q96KW2 1035 aa4.49□□□□□ -1.69
LINC01541-202ENST00000568095 GGTLC1Q9BX51 225 aa4.49□□□□□ -1.69
LINC01541-202ENST00000568095 PKIBQ9C010 78 aa4.49□□□□□ -1.69
LINC01541-202ENST00000568095 IZUMO1RA6ND01 250 aa4.49□□□□□ -1.69
LINC01541-202ENST00000568095 CD5LO43866 347 aa4.49□□□□□ -1.69
LINC01541-202ENST00000568095 PATE4P0C8F1 98 aa4.49□□□□□ -1.69
LINC01541-202ENST00000568095 NPY1RP25929 384 aa4.49□□□□□ -1.69
LINC01541-202ENST00000568095 G6PCP35575 357 aa4.49□□□□□ -1.69
LINC01541-202ENST00000568095 RPL30P62888 115 aaKnown RBP4.49□□□□□ -1.69
LINC01541-202ENST00000568095 LCN12Q6JVE5 192 aa4.49□□□□□ -1.69
LINC01541-202ENST00000568095 IGF2BP2-AS1Q96M15 143 aa4.49□□□□□ -1.69
LINC01541-202ENST00000568095 FOXB1Q99853 325 aa4.49□□□□□ -1.69
LINC01541-202ENST00000568095 VPS25Q9BRG1 176 aa4.49□□□□□ -1.69
LINC01541-202ENST00000568095 ZNF835Q9Y2P0 537 aa4.49□□□□□ -1.69
LINC01541-202ENST00000568095 A0A1W2PPV4 95 aa4.48□□□□□ -1.69
LINC01541-202ENST00000568095 CBY3A6NI87 242 aa4.48□□□□□ -1.69
LINC01541-202ENST00000568095 K7ERU9 68 aa4.48□□□□□ -1.69
LINC01541-202ENST00000568095 CORTO00230 105 aa4.48□□□□□ -1.69
LINC01541-202ENST00000568095 HSPB6O14558 160 aa4.48□□□□□ -1.69
LINC01541-202ENST00000568095 IGLC1P0CG04 106 aa4.48□□□□□ -1.69
LINC01541-202ENST00000568095 B4GALT1P15291 398 aa4.48□□□□□ -1.69
LINC01541-202ENST00000568095 MALP21145 153 aa4.48□□□□□ -1.69
LINC01541-202ENST00000568095 RAC3P60763 192 aa4.48□□□□□ -1.69
LINC01541-202ENST00000568095 UBE2G1P62253 170 aa4.48□□□□□ -1.69
LINC01541-202ENST00000568095 VAMP3Q15836 100 aa4.48□□□□□ -1.69
LINC01541-202ENST00000568095 TNXAQ16473 311 aa4.48□□□□□ -1.69
LINC01541-202ENST00000568095 SPACA3Q8IXA5 215 aa4.48□□□□□ -1.69
LINC01541-202ENST00000568095 FAM58AQ8N1B3 248 aa4.48□□□□□ -1.69
LINC01541-202ENST00000568095 FAM19A2Q8N3H0 131 aa4.48□□□□□ -1.69
LINC01541-202ENST00000568095 HES7Q9BYE0 225 aa4.48□□□□□ -1.69
LINC01541-202ENST00000568095 COMMD5Q9GZQ3 224 aa4.48□□□□□ -1.69
LINC01541-202ENST00000568095 HEYLQ9NQ87 328 aaPredicted RBP4.48□□□□□ -1.69
LINC01541-202ENST00000568095 CLEC5AQ9NY25 188 aa4.48□□□□□ -1.69
LINC01541-202ENST00000568095 TECRQ9NZ01 308 aaKnown RBP4.48□□□□□ -1.69
LINC01541-202ENST00000568095 SLC25A10Q9UBX3 287 aaPredicted RBP4.48□□□□□ -1.69
LINC01541-202ENST00000568095 CACNA1GO43497 2377 aa4.48□□□□□ -1.69
LINC01541-202ENST00000568095 G3V4G9 280 aa4.48□□□□□ -1.69
LINC01541-202ENST00000568095 TOX4O94842 621 aa4.48□□□□□ -1.69
LINC01541-202ENST00000568095 APCSP02743 223 aa4.48□□□□□ -1.69
LINC01541-202ENST00000568095 CELA3BP08861 270 aa4.48□□□□□ -1.69
LINC01541-202ENST00000568095 VDAC2P45880 294 aaPredicted RBP4.48□□□□□ -1.69
LINC01541-202ENST00000568095 CYB561P49447 251 aa4.48□□□□□ -1.69
LINC01541-202ENST00000568095 ERVK11-1P61568 191 aa4.48□□□□□ -1.69
LINC01541-202ENST00000568095 SLAQ13239 276 aa4.48□□□□□ -1.69
LINC01541-202ENST00000568095 KIAA1644Q3SXP7 199 aa4.48□□□□□ -1.69
LINC01541-202ENST00000568095 MPV17L2Q567V2 206 aa4.48□□□□□ -1.69
LINC01541-202ENST00000568095 SPINK14Q6IE38 97 aa4.48□□□□□ -1.69
LINC01541-202ENST00000568095 OR52E5Q8NH55 327 aa4.48□□□□□ -1.69
LINC01541-202ENST00000568095 OR4S2Q8NH73 311 aa4.48□□□□□ -1.69
LINC01541-202ENST00000568095 URB1-AS1Q96HZ7 61 aa4.48□□□□□ -1.69
LINC01541-202ENST00000568095 FER1L6-AS2Q96M78 137 aa4.48□□□□□ -1.69
LINC01541-202ENST00000568095 SPXQ9BT56 116 aa4.48□□□□□ -1.69
LINC01541-202ENST00000568095 SCRT2Q9NQ03 307 aa4.48□□□□□ -1.69
LINC01541-202ENST00000568095 TNFRSF19Q9NS68 423 aa4.48□□□□□ -1.69
LINC01541-202ENST00000568095 MED12Q93074 2177 aa4.48□□□□□ -1.69
LINC01541-202ENST00000568095 KNTC1P50748 2209 aa4.48□□□□□ -1.69
LINC01541-202ENST00000568095 GAGE12BA1L429 117 aa4.48□□□□□ -1.69
LINC01541-202ENST00000568095 OR2T8A6NH00 312 aa4.48□□□□□ -1.69
LINC01541-202ENST00000568095 NKX2-8O15522 239 aa4.48□□□□□ -1.69
LINC01541-202ENST00000568095 KLK10O43240 276 aa4.48□□□□□ -1.69
LINC01541-202ENST00000568095 EDDM3BP56851 147 aa4.48□□□□□ -1.69
LINC01541-202ENST00000568095 CENPWQ5EE01 88 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms