RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 TBL2Q9Y4P3 447 aaKnown RBP11.76□□□□□ -0.53
COMMD4-221ENST00000567935 TRAV1-1A0A0B4J248 108 aa11.75□□□□□ -0.53
COMMD4-221ENST00000567935 A0A1B0GW64 132 aa11.75□□□□□ -0.53
COMMD4-221ENST00000567935 A0A1W2PPI3 338 aa11.75□□□□□ -0.53
COMMD4-221ENST00000567935 RNF223E7ERA6 249 aa11.75□□□□□ -0.53
COMMD4-221ENST00000567935 CD5LO43866 347 aa11.75□□□□□ -0.53
COMMD4-221ENST00000567935 TSPAN9O75954 239 aa11.75□□□□□ -0.53
COMMD4-221ENST00000567935 IFNA4P05014 189 aa11.75□□□□□ -0.53
COMMD4-221ENST00000567935 MDKP21741 143 aaPredicted RBP11.75□□□□□ -0.53
COMMD4-221ENST00000567935 FGF7P21781 194 aa11.75□□□□□ -0.53
COMMD4-221ENST00000567935 BSXQ3C1V8 233 aa11.75□□□□□ -0.53
COMMD4-221ENST00000567935 C2orf83Q53S99 150 aa11.75□□□□□ -0.53
COMMD4-221ENST00000567935 C10orf105Q8TEF2 133 aa11.75□□□□□ -0.53
COMMD4-221ENST00000567935 SIRPDQ9H106 197 aa11.75□□□□□ -0.53
COMMD4-221ENST00000567935 SIRT7Q9NRC8 400 aa11.75□□□□□ -0.53
COMMD4-221ENST00000567935 TNCP24821 2201 aa11.75□□□□□ -0.53
COMMD4-221ENST00000567935 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.74□□□□□ -0.532e-10■■■■■ 30.4
COMMD4-221ENST00000567935 PRSS46E5RG02 174 aa11.74□□□□□ -0.53
COMMD4-221ENST00000567935 CRYGBP07316 175 aa11.74□□□□□ -0.53
COMMD4-221ENST00000567935 H2AFB1P0C5Y9 115 aa11.74□□□□□ -0.53
COMMD4-221ENST00000567935 ZFP36P26651 326 aaKnown RBP11.74□□□□□ -0.53
COMMD4-221ENST00000567935 SNCAP37840 140 aa11.74□□□□□ -0.53
COMMD4-221ENST00000567935 SUB1P53999 127 aaKnown RBP eCLIP11.74□□□□□ -0.53
COMMD4-221ENST00000567935 DVL1P1P54792 670 aaPredicted RBP11.74□□□□□ -0.53
COMMD4-221ENST00000567935 ATP5J2P56134 94 aa11.74□□□□□ -0.53
COMMD4-221ENST00000567935 TMEM41BQ5BJD5 291 aa11.74□□□□□ -0.53
COMMD4-221ENST00000567935 HCP5Q6MZN7 132 aa11.74□□□□□ -0.53
COMMD4-221ENST00000567935 VMO1Q7Z5L0 202 aa11.74□□□□□ -0.53
COMMD4-221ENST00000567935 RBMXL1Q96E39 390 aaKnown RBP11.74□□□□□ -0.53
COMMD4-221ENST00000567935 RSG1Q9BU20 258 aa11.74□□□□□ -0.53
COMMD4-221ENST00000567935 HINT2Q9BX68 163 aa11.74□□□□□ -0.53
COMMD4-221ENST00000567935 CR1P17927 2039 aa11.74□□□□□ -0.53
COMMD4-221ENST00000567935 TMEM218A2RU14 115 aa11.73□□□□□ -0.53
COMMD4-221ENST00000567935 VWC2LB2RUY7 222 aa11.73□□□□□ -0.53
COMMD4-221ENST00000567935 RRHO14718 337 aa11.73□□□□□ -0.53
COMMD4-221ENST00000567935 SLC25A17O43808 307 aa11.73□□□□□ -0.53
COMMD4-221ENST00000567935 ACTL6BO94805 426 aa11.73□□□□□ -0.53
COMMD4-221ENST00000567935 LGALS4P56470 323 aa11.73□□□□□ -0.53
COMMD4-221ENST00000567935 LCN2P80188 198 aa11.73□□□□□ -0.53
COMMD4-221ENST00000567935 RAB31Q13636 194 aa11.73□□□□□ -0.53
COMMD4-221ENST00000567935 PEA15Q15121 130 aa11.73□□□□□ -0.53
COMMD4-221ENST00000567935 PSG5Q15238 335 aa11.73□□□□□ -0.53
COMMD4-221ENST00000567935 PRSS8Q16651 343 aa11.73□□□□□ -0.53
COMMD4-221ENST00000567935 BPIFCQ8NFQ6 507 aa11.73□□□□□ -0.53
COMMD4-221ENST00000567935 MBD3L1Q8WWY6 194 aa11.73□□□□□ -0.53
COMMD4-221ENST00000567935 SRSF8Q9BRL6 282 aaKnown RBP11.73□□□□□ -0.53
COMMD4-221ENST00000567935 ZNF430Q9H8G1 570 aaPredicted RBP11.73□□□□□ -0.53
COMMD4-221ENST00000567935 LPAR2Q9HBW0 351 aa11.73□□□□□ -0.53
COMMD4-221ENST00000567935 NPVFQ9HCQ7 196 aa11.73□□□□□ -0.53
COMMD4-221ENST00000567935 TOX4O94842 621 aa11.72□□□□□ -0.53
COMMD4-221ENST00000567935 CA2P00918 260 aa11.72□□□□□ -0.53
COMMD4-221ENST00000567935 CD5P06127 495 aa11.72□□□□□ -0.53
COMMD4-221ENST00000567935 COMPP49747 757 aaPredicted RBP11.72□□□□□ -0.53
COMMD4-221ENST00000567935 UBE2E1P51965 193 aa11.72□□□□□ -0.53
COMMD4-221ENST00000567935 RNASEH2CQ8TDP1 164 aaKnown RBP11.72□□□□□ -0.53
COMMD4-221ENST00000567935 TMEM170AQ8WVE7 144 aa11.72□□□□□ -0.53
COMMD4-221ENST00000567935 CACNG8Q8WXS5 425 aa11.72□□□□□ -0.53
COMMD4-221ENST00000567935 NARS2Q96I59 477 aaKnown RBP11.72□□□□□ -0.53
COMMD4-221ENST00000567935 LINC00052Q96N35 136 aa11.72□□□□□ -0.53
COMMD4-221ENST00000567935 NPCDR1Q9BY65 106 aa11.72□□□□□ -0.53
COMMD4-221ENST00000567935 TREM1Q9NP99 234 aa11.72□□□□□ -0.53
COMMD4-221ENST00000567935 KIAA1456Q9P272 454 aa11.72□□□□□ -0.53
COMMD4-221ENST00000567935 SIGLEC9Q9Y336 463 aa11.72□□□□□ -0.53
COMMD4-221ENST00000567935 TGP01266 2768 aa11.72□□□□□ -0.53
COMMD4-221ENST00000567935 IGHV3-72A0A0B4J1Y9 119 aa11.71□□□□□ -0.53
COMMD4-221ENST00000567935 RNASEK-C17orf49H0YIS7 233 aa11.71□□□□□ -0.53
COMMD4-221ENST00000567935 TIMM23O14925 209 aa11.71□□□□□ -0.53
COMMD4-221ENST00000567935 VENTXO95231 258 aa11.71□□□□□ -0.53
COMMD4-221ENST00000567935 RNASE2P10153 161 aaKnown RBP11.71□□□□□ -0.53
COMMD4-221ENST00000567935 GPX4P36969 197 aaPredicted RBP11.71□□□□□ -0.53
COMMD4-221ENST00000567935 RPL27AP46776 148 aaKnown RBP11.71□□□□□ -0.53
COMMD4-221ENST00000567935 FHITP49789 147 aa11.71□□□□□ -0.53
COMMD4-221ENST00000567935 PPP1R27Q86WC6 154 aa11.71□□□□□ -0.53
COMMD4-221ENST00000567935 CFHR4Q92496 578 aa11.71□□□□□ -0.53
COMMD4-221ENST00000567935 RPRMQ9NS64 109 aa11.71□□□□□ -0.53
COMMD4-221ENST00000567935 MOSP00540 346 aa11.7□□□□□ -0.54
COMMD4-221ENST00000567935 SLC25A16P16260 332 aa11.7□□□□□ -0.54
COMMD4-221ENST00000567935 OPRK1P41145 380 aa11.7□□□□□ -0.54
COMMD4-221ENST00000567935 DLX1P56177 255 aa11.7□□□□□ -0.54
COMMD4-221ENST00000567935 KLRD1Q13241 179 aa11.7□□□□□ -0.54
COMMD4-221ENST00000567935 PMS2P11Q13670 270 aa11.7□□□□□ -0.54
COMMD4-221ENST00000567935 GUK1Q16774 197 aa11.7□□□□□ -0.54
COMMD4-221ENST00000567935 ACOT6Q3I5F7 207 aaPredicted RBP11.7□□□□□ -0.54
COMMD4-221ENST00000567935 TREML4Q6UXN2 200 aa11.7□□□□□ -0.54
COMMD4-221ENST00000567935 ZNF114Q8NC26 417 aa11.7□□□□□ -0.54
COMMD4-221ENST00000567935 NPBQ8NG41 125 aa11.7□□□□□ -0.54
COMMD4-221ENST00000567935 OR2T10Q8NGZ9 312 aa11.7□□□□□ -0.54
COMMD4-221ENST00000567935 MALSU1Q96EH3 234 aa11.7□□□□□ -0.54
COMMD4-221ENST00000567935 SEC11CQ9BY50 192 aa11.7□□□□□ -0.54
COMMD4-221ENST00000567935 METTL1Q9UBP6 276 aaKnown RBP11.7□□□□□ -0.54
COMMD4-221ENST00000567935 ARHGAP32A7KAX9 2087 aa11.7□□□□□ -0.54
COMMD4-221ENST00000567935 SMCO3A2RU48 225 aa11.69□□□□□ -0.54
COMMD4-221ENST00000567935 CYB5BO43169 146 aa11.69□□□□□ -0.54
COMMD4-221ENST00000567935 NDUFA3O95167 84 aa11.69□□□□□ -0.54
COMMD4-221ENST00000567935 SNRNP70P08621 437 aaKnown RBP11.69□□□□□ -0.54
COMMD4-221ENST00000567935 MYOD1P15172 320 aa11.69□□□□□ -0.54
COMMD4-221ENST00000567935 M6PRP20645 277 aa11.69□□□□□ -0.54
COMMD4-221ENST00000567935 TAGLN2P37802 199 aaKnown RBP11.69□□□□□ -0.54
COMMD4-221ENST00000567935 EBI3Q14213 229 aa11.69□□□□□ -0.54
COMMD4-221ENST00000567935 TUSC1Q2TAM9 212 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms