RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 RANP62826 216 aaKnown RBP19.01■□□□□ 0.63
LINC00543-201ENST00000567234 RELBQ01201 579 aa19.01■□□□□ 0.63
LINC00543-201ENST00000567234 TMEM41BQ5BJD5 291 aa19.01■□□□□ 0.63
LINC00543-201ENST00000567234 ZNF833PQ6ZTB9 187 aa19.01■□□□□ 0.63
LINC00543-201ENST00000567234 LINC00311Q8N616 119 aa19.01■□□□□ 0.63
LINC00543-201ENST00000567234 ZDHHC16Q969W1 377 aa19.01■□□□□ 0.63
LINC00543-201ENST00000567234 WDR61Q9GZS3 305 aaKnown RBP19.01■□□□□ 0.63
LINC00543-201ENST00000567234 TMEM140Q9NV12 185 aa19.01■□□□□ 0.63
LINC00543-201ENST00000567234 RFNGQ9Y644 331 aa19.01■□□□□ 0.63
LINC00543-201ENST00000567234 DLEU1O43261 78 aa19■□□□□ 0.63
LINC00543-201ENST00000567234 GALR1P47211 349 aa19■□□□□ 0.63
LINC00543-201ENST00000567234 GNB2P62879 340 aa19■□□□□ 0.63
LINC00543-201ENST00000567234 GBGT1Q8N5D6 347 aa19■□□□□ 0.63
LINC00543-201ENST00000567234 OR10P1Q8NGE3 313 aa19■□□□□ 0.63
LINC00543-201ENST00000567234 RPRMQ9NS64 109 aa19■□□□□ 0.63
LINC00543-201ENST00000567234 ZNF462Q96JM2 2506 aa19■□□□□ 0.63
LINC00543-201ENST00000567234 SPTBN1Q01082 2364 aaKnown RBP19■□□□□ 0.63
LINC00543-201ENST00000567234 DLX6P56179 175 aa19■□□□□ 0.63
LINC00543-201ENST00000567234 RPP30P78346 268 aaKnown RBP19■□□□□ 0.63
LINC00543-201ENST00000567234 TMEM155Q4W5P6 130 aa19■□□□□ 0.63
LINC00543-201ENST00000567234 FAM71F2Q6NXP2 309 aa19■□□□□ 0.63
LINC00543-201ENST00000567234 KCNIP4Q6PIL6 250 aa19■□□□□ 0.63
LINC00543-201ENST00000567234 C16orf82Q7Z2V1 217 aa19■□□□□ 0.63
LINC00543-201ENST00000567234 SMIM7Q9BQ49 75 aa19■□□□□ 0.63
LINC00543-201ENST00000567234 TMEM147Q9BVK8 224 aa19■□□□□ 0.63
LINC00543-201ENST00000567234 RALYQ9UKM9 306 aaKnown RBP19■□□□□ 0.63
LINC00543-201ENST00000567234 RPLP1P05386 114 aaKnown RBP18.99■□□□□ 0.63
LINC00543-201ENST00000567234 CT45A6P0DMU7 189 aa18.99■□□□□ 0.63
LINC00543-201ENST00000567234 CT45A5P0DMU8 189 aa18.99■□□□□ 0.63
LINC00543-201ENST00000567234 CT45A7P0DMV0 189 aa18.99■□□□□ 0.63
LINC00543-201ENST00000567234 RTL8BQ17RB0 113 aa18.99■□□□□ 0.63
LINC00543-201ENST00000567234 OR8G2PQ6IF36 304 aa18.99■□□□□ 0.63
LINC00543-201ENST00000567234 CHODLQ9H9P2 273 aa18.99■□□□□ 0.63
LINC00543-201ENST00000567234 GOLT1BQ9Y3E0 138 aa18.99■□□□□ 0.63
LINC00543-201ENST00000567234 ABCA4P78363 2273 aa18.98■□□□□ 0.63
LINC00543-201ENST00000567234 C20orf144Q9BQM9 153 aa18.98■□□□□ 0.63
LINC00543-201ENST00000567234 RAB1BQ9H0U4 201 aa18.98■□□□□ 0.63
LINC00543-201ENST00000567234 MANBALQ9NQG1 85 aa18.98■□□□□ 0.63
LINC00543-201ENST00000567234 CBLN4Q9NTU7 201 aa18.98■□□□□ 0.63
LINC00543-201ENST00000567234 FKBP11Q9NYL4 201 aa18.98■□□□□ 0.63
LINC00543-201ENST00000567234 TET2Q6N021 2002 aaPredicted RBP18.98■□□□□ 0.63
LINC00543-201ENST00000567234 ZFP92A6NM28 416 aa18.97■□□□□ 0.63
LINC00543-201ENST00000567234 C15orf61A6NNL5 157 aa18.97■□□□□ 0.63
LINC00543-201ENST00000567234 COL8A2P25067 703 aa18.97■□□□□ 0.63
LINC00543-201ENST00000567234 MEF2BQ02080 365 aaPredicted RBP18.97■□□□□ 0.63
LINC00543-201ENST00000567234 MRPL41Q8IXM3 137 aaKnown RBP18.97■□□□□ 0.63
LINC00543-201ENST00000567234 VKORC1L1Q8N0U8 176 aa18.97■□□□□ 0.63
LINC00543-201ENST00000567234 OR2T10Q8NGZ9 312 aa18.97■□□□□ 0.63
LINC00543-201ENST00000567234 ITLN2Q8WWU7 325 aaPredicted RBP18.97■□□□□ 0.63
LINC00543-201ENST00000567234 TAF15Q92804 592 aaKnown RBP eCLIP18.97■□□□□ 0.63
LINC00543-201ENST00000567234 FOXA2Q9Y261 457 aaPredicted RBP18.97■□□□□ 0.63
LINC00543-201ENST00000567234 VWC2Q2TAL6 325 aa18.97■□□□□ 0.63
LINC00543-201ENST00000567234 OR4A47Q6IF82 309 aa18.97■□□□□ 0.63
LINC00543-201ENST00000567234 RSG1Q9BU20 258 aa18.97■□□□□ 0.63
LINC00543-201ENST00000567234 SLC35D1Q9NTN3 355 aa18.97■□□□□ 0.63
LINC00543-201ENST00000567234 MAP1LC3B2A6NCE7 125 aa18.96■□□□□ 0.63
LINC00543-201ENST00000567234 IL6RP08887 468 aaPredicted RBP18.96■□□□□ 0.63
LINC00543-201ENST00000567234 VDAC2P45880 294 aaPredicted RBP18.96■□□□□ 0.63
LINC00543-201ENST00000567234 MAP1LC3BQ9GZQ8 125 aa18.96■□□□□ 0.63
LINC00543-201ENST00000567234 TMEM14BQ9NUH8 114 aa18.96■□□□□ 0.63
LINC00543-201ENST00000567234 C15orf62A8K5M9 175 aa18.95■□□□□ 0.62
LINC00543-201ENST00000567234 CNN1P51911 297 aaKnown RBP18.95■□□□□ 0.62
LINC00543-201ENST00000567234 TMEM186Q96B77 213 aa18.95■□□□□ 0.62
LINC00543-201ENST00000567234 TRAV3A0A0B4J244 114 aa18.95■□□□□ 0.62
LINC00543-201ENST00000567234 UBE2L5PA0A1B0GUS4 154 aa18.95■□□□□ 0.62
LINC00543-201ENST00000567234 J3QR06 171 aa18.95■□□□□ 0.62
LINC00543-201ENST00000567234 ZNF25P17030 456 aaPredicted RBP18.95■□□□□ 0.62
LINC00543-201ENST00000567234 ZNF137PP52743 207 aa18.95■□□□□ 0.62
LINC00543-201ENST00000567234 RPL23P62829 140 aaKnown RBP18.95■□□□□ 0.62
LINC00543-201ENST00000567234 ADIRFQ15847 76 aa18.95■□□□□ 0.62
LINC00543-201ENST00000567234 C11orf71Q6IPW1 123 aa18.95■□□□□ 0.62
LINC00543-201ENST00000567234 NAGKQ9UJ70 344 aa18.95■□□□□ 0.62
LINC00543-201ENST00000567234 TCF19Q9Y242 345 aa18.95■□□□□ 0.62
LINC00543-201ENST00000567234 PSMB3P49720 205 aa18.94■□□□□ 0.62
LINC00543-201ENST00000567234 HSPE1P61604 102 aaKnown RBP18.94■□□□□ 0.62
LINC00543-201ENST00000567234 SPINK9Q5DT21 86 aa18.94■□□□□ 0.62
LINC00543-201ENST00000567234 OR9G1Q8NH87 305 aa18.94■□□□□ 0.62
LINC00543-201ENST00000567234 APOA2P02652 100 aa18.93■□□□□ 0.62
LINC00543-201ENST00000567234 ZNF726P1Q15940 193 aa18.93■□□□□ 0.62
LINC00543-201ENST00000567234 ZNF841Q6ZN19 808 aa18.93■□□□□ 0.62
LINC00543-201ENST00000567234 OR5AN1Q8NGI8 311 aa18.93■□□□□ 0.62
LINC00543-201ENST00000567234 OSR1Q8TAX0 266 aaPredicted RBP18.93■□□□□ 0.62
LINC00543-201ENST00000567234 NEU4Q8WWR8 484 aaPredicted RBP18.93■□□□□ 0.62
LINC00543-201ENST00000567234 TMEM208Q9BTX3 173 aa18.93■□□□□ 0.62
LINC00543-201ENST00000567234 PRNDQ9UKY0 176 aa18.93■□□□□ 0.62
LINC00543-201ENST00000567234 FLNCQ14315 2725 aa18.93■□□□□ 0.62
LINC00543-201ENST00000567234 CHD6Q8TD26 2715 aa18.93■□□□□ 0.62
LINC00543-201ENST00000567234 LYNX1G3V0Z9 82 aa18.93■□□□□ 0.62
LINC00543-201ENST00000567234 IGHV1-8P0DP01 117 aa18.93■□□□□ 0.62
LINC00543-201ENST00000567234 LYNX1P0DP58 116 aa18.93■□□□□ 0.62
LINC00543-201ENST00000567234 ANKRD39Q53RE8 183 aa18.93■□□□□ 0.62
LINC00543-201ENST00000567234 OR10X1Q8NGY0 326 aa18.93■□□□□ 0.62
LINC00543-201ENST00000567234 HEYLQ9NQ87 328 aaPredicted RBP18.93■□□□□ 0.62
LINC00543-201ENST00000567234 ZNRD1Q9P1U0 126 aa18.93■□□□□ 0.62
LINC00543-201ENST00000567234 ZNF257Q9Y2Q1 563 aa18.93■□□□□ 0.62
LINC00543-201ENST00000567234 MDKP21741 143 aaPredicted RBP18.92■□□□□ 0.62
LINC00543-201ENST00000567234 PAFAH1B2P68402 229 aa18.92■□□□□ 0.62
LINC00543-201ENST00000567234 TEX38Q6PEX7 206 aa18.92■□□□□ 0.62
LINC00543-201ENST00000567234 LCN15Q6UWW0 184 aa18.92■□□□□ 0.62
LINC00543-201ENST00000567234 C11orf42Q8N5U0 333 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms