RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 S100GP29377 79 aa11.12□□□□□ -0.63
RNF40-209ENST00000566703 FCGR2BP31994 310 aaPredicted RBP11.12□□□□□ -0.63
RNF40-209ENST00000566703 ADMP35318 185 aa11.12□□□□□ -0.63
RNF40-209ENST00000566703 G6PCP35575 357 aa11.12□□□□□ -0.63
RNF40-209ENST00000566703 RPS19P39019 145 aaKnown RBP11.12□□□□□ -0.63
RNF40-209ENST00000566703 LYSMD2Q8IV50 215 aa11.12□□□□□ -0.63
RNF40-209ENST00000566703 OR1P1Q8NH06 330 aa11.12□□□□□ -0.63
RNF40-209ENST00000566703 LINC00476Q8WZB0 136 aa11.12□□□□□ -0.63
RNF40-209ENST00000566703 RNF183Q96D59 192 aa11.12□□□□□ -0.63
RNF40-209ENST00000566703 GALNT14Q96FL9 552 aa11.12□□□□□ -0.63
RNF40-209ENST00000566703 TXN2Q99757 166 aa11.12□□□□□ -0.63
RNF40-209ENST00000566703 C20orf24Q9BUV8 137 aa11.12□□□□□ -0.63
RNF40-209ENST00000566703 TMEM14BQ9NUH8 114 aa11.12□□□□□ -0.63
RNF40-209ENST00000566703 SMPXQ9UHP9 88 aa11.12□□□□□ -0.63
RNF40-209ENST00000566703 NSG2Q9Y328 171 aa11.12□□□□□ -0.63
RNF40-209ENST00000566703 CSMD3Q7Z407 3707 aa11.11□□□□□ -0.63
RNF40-209ENST00000566703 A0A0J9YWU9 116 aa11.11□□□□□ -0.63
RNF40-209ENST00000566703 NUPL2O15504 423 aaKnown RBP11.11□□□□□ -0.63
RNF40-209ENST00000566703 CTSGP08311 255 aa11.11□□□□□ -0.63
RNF40-209ENST00000566703 RELQ04864 619 aaPredicted RBP11.11□□□□□ -0.63
RNF40-209ENST00000566703 ODF3L2Q3SX64 289 aa11.11□□□□□ -0.63
RNF40-209ENST00000566703 Q56UQ5 140 aa11.11□□□□□ -0.63
RNF40-209ENST00000566703 CEMP1Q6PRD7 247 aaPredicted RBP11.11□□□□□ -0.63
RNF40-209ENST00000566703 LYG2Q86SG7 212 aa11.11□□□□□ -0.63
RNF40-209ENST00000566703 TMEM217Q8N7C4 229 aa11.11□□□□□ -0.63
RNF40-209ENST00000566703 SAMD12Q8N8I0 201 aa11.11□□□□□ -0.63
RNF40-209ENST00000566703 CMTM3Q96MX0 182 aa11.11□□□□□ -0.63
RNF40-209ENST00000566703 UBQLN2Q9UHD9 624 aa11.11□□□□□ -0.63
RNF40-209ENST00000566703 CXorf65A6NEN9 183 aa11.1□□□□□ -0.63
RNF40-209ENST00000566703 C15orf61A6NNL5 157 aa11.1□□□□□ -0.63
RNF40-209ENST00000566703 CTSDP07339 412 aaPredicted RBP11.1□□□□□ -0.63
RNF40-209ENST00000566703 MFAP4P55083 255 aa11.1□□□□□ -0.63
RNF40-209ENST00000566703 UCP3P55916 312 aa11.1□□□□□ -0.63
RNF40-209ENST00000566703 GPX8Q8TED1 209 aa11.1□□□□□ -0.63
RNF40-209ENST00000566703 C6orf62Q9GZU0 229 aaPredicted RBP11.1□□□□□ -0.63
RNF40-209ENST00000566703 FXYD6Q9H0Q3 95 aa11.1□□□□□ -0.63
RNF40-209ENST00000566703 MAP6D1Q9H9H5 199 aa11.1□□□□□ -0.63
RNF40-209ENST00000566703 KLK5Q9Y337 293 aaPredicted RBP11.1□□□□□ -0.63
RNF40-209ENST00000566703 IGHV3-21A0A0B4J1V1 117 aa11.09□□□□□ -0.63
RNF40-209ENST00000566703 CD5P06127 495 aa11.09□□□□□ -0.63
RNF40-209ENST00000566703 HRH1P35367 487 aa11.09□□□□□ -0.63
RNF40-209ENST00000566703 TSPAN5P62079 268 aa11.09□□□□□ -0.63
RNF40-209ENST00000566703 DEFB135Q30KP9 77 aa11.09□□□□□ -0.63
RNF40-209ENST00000566703 UBAC2Q8NBM4 344 aa11.09□□□□□ -0.63
RNF40-209ENST00000566703 YIPF6Q96EC8 236 aa11.09□□□□□ -0.63
RNF40-209ENST00000566703 OR10C1Q96KK4 312 aa11.09□□□□□ -0.63
RNF40-209ENST00000566703 RHPN1-AS1Q9BWJ2 59 aa11.09□□□□□ -0.63
RNF40-209ENST00000566703 SCPEP1Q9HB40 452 aa11.09□□□□□ -0.63
RNF40-209ENST00000566703 IGHV7-4-1A0A0J9YVY3 117 aa11.08□□□□□ -0.64
RNF40-209ENST00000566703 SMIM31A0A1B0GVY4 71 aa11.08□□□□□ -0.64
RNF40-209ENST00000566703 DBX1A6NMT0 343 aa11.08□□□□□ -0.64
RNF40-209ENST00000566703 I3L2K1 104 aa11.08□□□□□ -0.64
RNF40-209ENST00000566703 CHEK1O14757 476 aa11.08□□□□□ -0.64
RNF40-209ENST00000566703 LY6G6CO95867 125 aa11.08□□□□□ -0.64
RNF40-209ENST00000566703 HLA-DMAP28067 261 aa11.08□□□□□ -0.64
RNF40-209ENST00000566703 HSPE1P61604 102 aaKnown RBP11.08□□□□□ -0.64
RNF40-209ENST00000566703 PMS2P11Q13670 270 aa11.08□□□□□ -0.64
RNF40-209ENST00000566703 PHLDA2Q53GA4 152 aa11.08□□□□□ -0.64
RNF40-209ENST00000566703 H2BFWTQ7Z2G1 175 aa11.08□□□□□ -0.64
RNF40-209ENST00000566703 ZNF114Q8NC26 417 aa11.08□□□□□ -0.64
RNF40-209ENST00000566703 TMEM116Q8NCL8 245 aa11.08□□□□□ -0.64
RNF40-209ENST00000566703 OR4A16Q8NH70 328 aa11.08□□□□□ -0.64
RNF40-209ENST00000566703 SEC22AQ96IW7 307 aa11.08□□□□□ -0.64
RNF40-209ENST00000566703 LYSTQ99698 3801 aa11.08□□□□□ -0.64
RNF40-209ENST00000566703 NXF2Q9GZY0 626 aaKnown RBP11.08□□□□□ -0.64
RNF40-209ENST00000566703 VCX3AQ9NNX9 186 aa11.08□□□□□ -0.64
RNF40-209ENST00000566703 ZNF207O43670 478 aaKnown RBP11.07□□□□□ -0.64
RNF40-209ENST00000566703 APOA1P02647 267 aa11.07□□□□□ -0.64
RNF40-209ENST00000566703 TGFBR1P36897 503 aa11.07□□□□□ -0.64
RNF40-209ENST00000566703 ERHP84090 104 aaKnown RBP11.07□□□□□ -0.64
RNF40-209ENST00000566703 PRCDQ00LT1 54 aa11.07□□□□□ -0.64
RNF40-209ENST00000566703 EWSR1Q01844 656 aaKnown RBP eCLIP11.07□□□□□ -0.64
RNF40-209ENST00000566703 FAM90A2PQ658T7 463 aa11.07□□□□□ -0.64
RNF40-209ENST00000566703 TBC1D26Q86UD7 250 aa11.07□□□□□ -0.64
RNF40-209ENST00000566703 SLC25A46Q96AG3 418 aa11.07□□□□□ -0.64
RNF40-209ENST00000566703 ZNF414Q96IQ9 312 aa11.07□□□□□ -0.64
RNF40-209ENST00000566703 RNF2Q99496 336 aa11.07□□□□□ -0.64
RNF40-209ENST00000566703 CSTL1Q9H114 145 aa11.07□□□□□ -0.64
RNF40-209ENST00000566703 BIRC6Q9NR09 4857 aa11.07□□□□□ -0.64
RNF40-209ENST00000566703 IGHV3OR16-8A0A075B7F1 116 aa11.06□□□□□ -0.64
RNF40-209ENST00000566703 A0A087WXM4 84 aa11.06□□□□□ -0.64
RNF40-209ENST00000566703 TRAV14DV4A0A0A6YYC5 116 aa11.06□□□□□ -0.64
RNF40-209ENST00000566703 MPTX1A8MV57 137 aa11.06□□□□□ -0.64
RNF40-209ENST00000566703 YIF1AO95070 293 aa11.06□□□□□ -0.64
RNF40-209ENST00000566703 MT-CO2P00403 227 aa11.06□□□□□ -0.64
RNF40-209ENST00000566703 RPL35AP18077 110 aaKnown RBP11.06□□□□□ -0.64
RNF40-209ENST00000566703 PAFAH1B2P68402 229 aa11.06□□□□□ -0.64
RNF40-209ENST00000566703 GATAD1Q8WUU5 269 aa11.06□□□□□ -0.64
RNF40-209ENST00000566703 MISP3Q96FF7 219 aa11.06□□□□□ -0.64
RNF40-209ENST00000566703 EPPK1P58107 5090 aaKnown RBP11.05□□□□□ -0.64
RNF40-209ENST00000566703 GNG7O60262 68 aa11.05□□□□□ -0.64
RNF40-209ENST00000566703 IGKV1-39P01597 117 aa11.05□□□□□ -0.64
RNF40-209ENST00000566703 IGKV1D-39P04432 117 aa11.05□□□□□ -0.64
RNF40-209ENST00000566703 EIF4EP06730 217 aaKnown RBP11.05□□□□□ -0.64
RNF40-209ENST00000566703 RCVRNP35243 200 aa11.05□□□□□ -0.64
RNF40-209ENST00000566703 LSM3P62310 102 aaKnown RBP11.05□□□□□ -0.64
RNF40-209ENST00000566703 GINS3Q9BRX5 216 aa11.05□□□□□ -0.64
RNF40-209ENST00000566703 COMMD3Q9UBI1 195 aa11.05□□□□□ -0.64
RNF40-209ENST00000566703 INS-IGF2F8WCM5 200 aa11.04□□□□□ -0.64
RNF40-209ENST00000566703 NPBWR1P48145 328 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms