RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 Q56UQ5 140 aa8.9□□□□□ -0.98
UBR1-206ENST00000566493 CADM3Q8N126 398 aa8.9□□□□□ -0.98
UBR1-206ENST00000566493 FCAMRQ8WWV6 532 aa8.9□□□□□ -0.98
UBR1-206ENST00000566493 C21orf62Q9NYP8 219 aa8.9□□□□□ -0.98
UBR1-206ENST00000566493 UBQLN2Q9UHD9 624 aa8.9□□□□□ -0.98
UBR1-206ENST00000566493 PRNDQ9UKY0 176 aa8.9□□□□□ -0.98
UBR1-206ENST00000566493 NSG2Q9Y328 171 aa8.9□□□□□ -0.98
UBR1-206ENST00000566493 F11RQ9Y624 299 aaKnown RBP8.9□□□□□ -0.98
UBR1-206ENST00000566493 CXorf65A6NEN9 183 aa8.89□□□□□ -0.99
UBR1-206ENST00000566493 OR4C46A6NHA9 309 aa8.89□□□□□ -0.99
UBR1-206ENST00000566493 UBE2CO00762 179 aa8.89□□□□□ -0.99
UBR1-206ENST00000566493 SPRY2O43597 315 aa8.89□□□□□ -0.99
UBR1-206ENST00000566493 RPS19P39019 145 aaKnown RBP8.89□□□□□ -0.99
UBR1-206ENST00000566493 TSPAN5P62079 268 aa8.89□□□□□ -0.99
UBR1-206ENST00000566493 Q6ZWC4 215 aa8.89□□□□□ -0.99
UBR1-206ENST00000566493 STPG3Q8N7X2 389 aa8.89□□□□□ -0.99
UBR1-206ENST00000566493 SCARB1Q8WTV0 552 aa8.89□□□□□ -0.99
UBR1-206ENST00000566493 TSC22D3Q99576 134 aa8.89□□□□□ -0.99
UBR1-206ENST00000566493 VCX3AQ9NNX9 186 aa8.89□□□□□ -0.99
UBR1-206ENST00000566493 TP53TG1Q9Y2A0 90 aa8.89□□□□□ -0.99
UBR1-206ENST00000566493 BIRC6Q9NR09 4857 aa8.88□□□□□ -0.99
UBR1-206ENST00000566493 SMIM31A0A1B0GVY4 71 aa8.88□□□□□ -0.99
UBR1-206ENST00000566493 K7EMT4 169 aa8.88□□□□□ -0.99
UBR1-206ENST00000566493 ZNF207O43670 478 aaKnown RBP8.88□□□□□ -0.99
UBR1-206ENST00000566493 NAT1P18440 290 aa8.88□□□□□ -0.99
UBR1-206ENST00000566493 BMI1P35226 326 aa8.88□□□□□ -0.99
UBR1-206ENST00000566493 TGFBR1P36897 503 aa8.88□□□□□ -0.99
UBR1-206ENST00000566493 LSM3P62310 102 aaKnown RBP8.88□□□□□ -0.99
UBR1-206ENST00000566493 RELQ04864 619 aaPredicted RBP8.88□□□□□ -0.99
UBR1-206ENST00000566493 PMS2P11Q13670 270 aa8.88□□□□□ -0.99
UBR1-206ENST00000566493 PLECQ15149 4684 aaKnown RBP8.88□□□□□ -0.99
UBR1-206ENST00000566493 PHLDA2Q53GA4 152 aa8.88□□□□□ -0.99
UBR1-206ENST00000566493 LPCAT3Q6P1A2 487 aa8.88□□□□□ -0.99
UBR1-206ENST00000566493 OR5B3Q8NH48 314 aa8.88□□□□□ -0.99
UBR1-206ENST00000566493 OR4A16Q8NH70 328 aa8.88□□□□□ -0.99
UBR1-206ENST00000566493 CHRDL1Q9BU40 450 aa8.88□□□□□ -0.99
UBR1-206ENST00000566493 C6orf62Q9GZU0 229 aaPredicted RBP8.88□□□□□ -0.99
UBR1-206ENST00000566493 FXYD6Q9H0Q3 95 aa8.88□□□□□ -0.99
UBR1-206ENST00000566493 ANAPC10Q9UM13 185 aa8.88□□□□□ -0.99
UBR1-206ENST00000566493 IGHV3OR16-8A0A075B7F1 116 aa8.87□□□□□ -0.99
UBR1-206ENST00000566493 A0A0J9YWU9 116 aa8.87□□□□□ -0.99
UBR1-206ENST00000566493 NUPR2A6NF83 97 aa8.87□□□□□ -0.99
UBR1-206ENST00000566493 C15orf62A8K5M9 175 aa8.87□□□□□ -0.99
UBR1-206ENST00000566493 NUPL2O15504 423 aaKnown RBP8.87□□□□□ -0.99
UBR1-206ENST00000566493 HLA-DMAP28067 261 aa8.87□□□□□ -0.99
UBR1-206ENST00000566493 HRH1P35367 487 aa8.87□□□□□ -0.99
UBR1-206ENST00000566493 MFAP2P55001 183 aa8.87□□□□□ -0.99
UBR1-206ENST00000566493 TNFRSF9Q07011 255 aa8.87□□□□□ -0.99
UBR1-206ENST00000566493 DEFB135Q30KP9 77 aa8.87□□□□□ -0.99
UBR1-206ENST00000566493 H2BFWTQ7Z2G1 175 aa8.87□□□□□ -0.99
UBR1-206ENST00000566493 LYG2Q86SG7 212 aa8.87□□□□□ -0.99
UBR1-206ENST00000566493 WFDC3Q8IUB2 231 aa8.87□□□□□ -0.99
UBR1-206ENST00000566493 OR1P1Q8NH06 330 aa8.87□□□□□ -0.99
UBR1-206ENST00000566493 ALMS1Q8TCU4 4167 aa8.86□□□□□ -0.99
UBR1-206ENST00000566493 KIR2DL5BA0A0G2JN68 375 aa8.86□□□□□ -0.99
UBR1-206ENST00000566493 KIR2DL5BA0A0G2JPC4 375 aa8.86□□□□□ -0.99
UBR1-206ENST00000566493 C15orf61A6NNL5 157 aa8.86□□□□□ -0.99
UBR1-206ENST00000566493 K7EIM0 57 aa8.86□□□□□ -0.99
UBR1-206ENST00000566493 YIF1AO95070 293 aa8.86□□□□□ -0.99
UBR1-206ENST00000566493 CTSDP07339 412 aaPredicted RBP8.86□□□□□ -0.99
UBR1-206ENST00000566493 RPL35AP18077 110 aaKnown RBP8.86□□□□□ -0.99
UBR1-206ENST00000566493 ADMP35318 185 aa8.86□□□□□ -0.99
UBR1-206ENST00000566493 MFAP4P55083 255 aa8.86□□□□□ -0.99
UBR1-206ENST00000566493 CMC4P56277 68 aaPredicted RBP8.86□□□□□ -0.99
UBR1-206ENST00000566493 LYSMD2Q8IV50 215 aa8.86□□□□□ -0.99
UBR1-206ENST00000566493 KIR2DL5AQ8N109 375 aa8.86□□□□□ -0.99
UBR1-206ENST00000566493 TMEM217Q8N7C4 229 aa8.86□□□□□ -0.99
UBR1-206ENST00000566493 KIR2DL5BQ8NHK3 375 aa8.86□□□□□ -0.99
UBR1-206ENST00000566493 SLC25A46Q96AG3 418 aa8.86□□□□□ -0.99
UBR1-206ENST00000566493 MISP3Q96FF7 219 aa8.86□□□□□ -0.99
UBR1-206ENST00000566493 GALNT14Q96FL9 552 aa8.86□□□□□ -0.99
UBR1-206ENST00000566493 CMTM3Q96MX0 182 aa8.86□□□□□ -0.99
UBR1-206ENST00000566493 TXN2Q99757 166 aa8.86□□□□□ -0.99
UBR1-206ENST00000566493 FAM212BQ9NTI7 297 aaPredicted RBP8.86□□□□□ -0.99
UBR1-206ENST00000566493 TMEM14BQ9NUH8 114 aa8.86□□□□□ -0.99
UBR1-206ENST00000566493 COMMD3Q9UBI1 195 aa8.86□□□□□ -0.99
UBR1-206ENST00000566493 ELOA3CA0A087WX78 387 aaPredicted RBP8.85□□□□□ -0.99
UBR1-206ENST00000566493 A0A087WXM4 84 aa8.85□□□□□ -0.99
UBR1-206ENST00000566493 F8W735 103 aaPredicted RBP8.85□□□□□ -0.99
UBR1-206ENST00000566493 LY6G6CO95867 125 aa8.85□□□□□ -0.99
UBR1-206ENST00000566493 CTSGP08311 255 aa8.85□□□□□ -0.99
UBR1-206ENST00000566493 ERHP84090 104 aaKnown RBP8.85□□□□□ -0.99
UBR1-206ENST00000566493 ODF3L2Q3SX64 289 aa8.85□□□□□ -0.99
UBR1-206ENST00000566493 TBC1D26Q86UD7 250 aa8.85□□□□□ -0.99
UBR1-206ENST00000566493 TMEM116Q8NCL8 245 aa8.85□□□□□ -0.99
UBR1-206ENST00000566493 GPX8Q8TED1 209 aa8.85□□□□□ -0.99
UBR1-206ENST00000566493 LINC00476Q8WZB0 136 aa8.85□□□□□ -0.99
UBR1-206ENST00000566493 RNF183Q96D59 192 aa8.85□□□□□ -0.99
UBR1-206ENST00000566493 YIPF6Q96EC8 236 aa8.85□□□□□ -0.99
UBR1-206ENST00000566493 RHPN1-AS1Q9BWJ2 59 aa8.85□□□□□ -0.99
UBR1-206ENST00000566493 SCPEP1Q9HB40 452 aa8.85□□□□□ -0.99
UBR1-206ENST00000566493 SMPXQ9UHP9 88 aa8.85□□□□□ -0.99
UBR1-206ENST00000566493 KLK5Q9Y337 293 aaPredicted RBP8.85□□□□□ -0.99
UBR1-206ENST00000566493 TRAV14DV4A0A0A6YYC5 116 aa8.84□□□□□ -0.99
UBR1-206ENST00000566493 IGHV7-4-1A0A0J9YVY3 117 aa8.84□□□□□ -0.99
UBR1-206ENST00000566493 DBX1A6NMT0 343 aa8.84□□□□□ -0.99
UBR1-206ENST00000566493 GNG7O60262 68 aa8.84□□□□□ -0.99
UBR1-206ENST00000566493 APOA1P02647 267 aa8.84□□□□□ -0.99
UBR1-206ENST00000566493 EIF4EP06730 217 aaKnown RBP8.84□□□□□ -0.99
UBR1-206ENST00000566493 RCVRNP35243 200 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms