RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 PFDN5Q99471 154 aa10.86□□□□□ -0.67
LINC00563-201ENST00000566370 RNF5Q99942 180 aa10.86□□□□□ -0.67
LINC00563-201ENST00000566370 FUT9Q9Y231 359 aa10.86□□□□□ -0.67
LINC00563-201ENST00000566370 URGCP-MRPS24S4R325 110 aa10.86□□□□□ -0.67
LINC00563-201ENST00000566370 PRRC2CQ9Y520 2896 aaKnown RBP10.86□□□□□ -0.67
LINC00563-201ENST00000566370 TET2Q6N021 2002 aaPredicted RBP10.86□□□□□ -0.67
LINC00563-201ENST00000566370 IGHV2-26A0A0B4J1V2 119 aa10.85□□□□□ -0.67
LINC00563-201ENST00000566370 C5orf52A6NGY3 159 aa10.85□□□□□ -0.67
LINC00563-201ENST00000566370 CORTO00230 105 aa10.85□□□□□ -0.67
LINC00563-201ENST00000566370 PLAUP00749 431 aa10.85□□□□□ -0.67
LINC00563-201ENST00000566370 SRP14P37108 136 aaKnown RBP10.85□□□□□ -0.67
LINC00563-201ENST00000566370 CEACAM3P40198 252 aa10.85□□□□□ -0.67
LINC00563-201ENST00000566370 UBE2G2P60604 165 aa10.85□□□□□ -0.67
LINC00563-201ENST00000566370 SELENOTP62341 195 aa10.85□□□□□ -0.67
LINC00563-201ENST00000566370 ADORA2A-AS1P86434 159 aa10.85□□□□□ -0.67
LINC00563-201ENST00000566370 PRR20EP86478 221 aa10.85□□□□□ -0.67
LINC00563-201ENST00000566370 PRR20CP86479 221 aa10.85□□□□□ -0.67
LINC00563-201ENST00000566370 PRR20DP86480 221 aa10.85□□□□□ -0.67
LINC00563-201ENST00000566370 PRR20BP86481 221 aa10.85□□□□□ -0.67
LINC00563-201ENST00000566370 PRR20AP86496 221 aa10.85□□□□□ -0.67
LINC00563-201ENST00000566370 PQLC2Q6ZP29 291 aa10.85□□□□□ -0.67
LINC00563-201ENST00000566370 RPEQ96AT9 228 aa10.85□□□□□ -0.67
LINC00563-201ENST00000566370 INSIG2Q9Y5U4 225 aa10.85□□□□□ -0.67
LINC00563-201ENST00000566370 MDFIC2A0A1B0GVS7 189 aa10.84□□□□□ -0.67
LINC00563-201ENST00000566370 OR10J1P30954 320 aa10.84□□□□□ -0.67
LINC00563-201ENST00000566370 GALR1P47211 349 aa10.84□□□□□ -0.67
LINC00563-201ENST00000566370 GCSAMLQ5JQS6 135 aa10.84□□□□□ -0.67
LINC00563-201ENST00000566370 FAM78BQ5VT40 261 aa10.84□□□□□ -0.67
LINC00563-201ENST00000566370 C16orf82Q7Z2V1 217 aa10.84□□□□□ -0.67
LINC00563-201ENST00000566370 OR4P4Q8NGL7 312 aa10.84□□□□□ -0.67
LINC00563-201ENST00000566370 ABHD5Q8WTS1 349 aa10.84□□□□□ -0.67
LINC00563-201ENST00000566370 ZNF430Q9H8G1 570 aaPredicted RBP10.84□□□□□ -0.67
LINC00563-201ENST00000566370 ZNRD1Q9P1U0 126 aa10.84□□□□□ -0.67
LINC00563-201ENST00000566370 ICE1Q9Y2F5 2266 aa10.84□□□□□ -0.67
LINC00563-201ENST00000566370 TGIF2-C20orf24A0A0A6YYL0 155 aa10.84□□□□□ -0.67
LINC00563-201ENST00000566370 SLC25A17O43808 307 aa10.84□□□□□ -0.67
LINC00563-201ENST00000566370 EIF3GO75821 320 aaKnown RBP eCLIP10.84□□□□□ -0.67
LINC00563-201ENST00000566370 COL8A2P25067 703 aa10.84□□□□□ -0.67
LINC00563-201ENST00000566370 RPL27AP46776 148 aaKnown RBP10.84□□□□□ -0.67
LINC00563-201ENST00000566370 FABP9Q0Z7S8 132 aa10.84□□□□□ -0.67
LINC00563-201ENST00000566370 GAMTQ14353 236 aa10.84□□□□□ -0.67
LINC00563-201ENST00000566370 ZNF343Q6P1L6 599 aa10.84□□□□□ -0.67
LINC00563-201ENST00000566370 MOB3BQ86TA1 216 aa10.84□□□□□ -0.67
LINC00563-201ENST00000566370 GATAD1Q8WUU5 269 aa10.84□□□□□ -0.67
LINC00563-201ENST00000566370 SSX3Q99909 188 aa10.84□□□□□ -0.67
LINC00563-201ENST00000566370 AKAP13Q12802 2813 aa10.83□□□□□ -0.68
LINC00563-201ENST00000566370 ELOA3CA0A087WX78 387 aaPredicted RBP10.83□□□□□ -0.68
LINC00563-201ENST00000566370 PPP5D1E7EU14 171 aa10.83□□□□□ -0.68
LINC00563-201ENST00000566370 BUB1B-PAK6H3BSN5 160 aa10.83□□□□□ -0.68
LINC00563-201ENST00000566370 FCN3O75636 299 aa10.83□□□□□ -0.68
LINC00563-201ENST00000566370 SMIM6P0DI80 62 aa10.83□□□□□ -0.68
LINC00563-201ENST00000566370 MYOD1P15172 320 aa10.83□□□□□ -0.68
LINC00563-201ENST00000566370 AREGP15514 252 aa10.83□□□□□ -0.68
LINC00563-201ENST00000566370 RPL19P84098 196 aaKnown RBP10.83□□□□□ -0.68
LINC00563-201ENST00000566370 ACY3Q96HD9 319 aa10.83□□□□□ -0.68
LINC00563-201ENST00000566370 ONECUT1Q9UBC0 465 aa10.83□□□□□ -0.68
LINC00563-201ENST00000566370 PTPRQQ9UMZ3 2332 aa10.82□□□□□ -0.68
LINC00563-201ENST00000566370 IGHV1-3A0A0C4DH29 117 aa10.82□□□□□ -0.68
LINC00563-201ENST00000566370 M0R1W7 72 aa10.82□□□□□ -0.68
LINC00563-201ENST00000566370 COX7A2P2O60397 106 aa10.82□□□□□ -0.68
LINC00563-201ENST00000566370 NDUFB4O95168 129 aa10.82□□□□□ -0.68
LINC00563-201ENST00000566370 IGLV1-47P01700 117 aa10.82□□□□□ -0.68
LINC00563-201ENST00000566370 IGLV2-23P01705 113 aa10.82□□□□□ -0.68
LINC00563-201ENST00000566370 CXCL1P09341 107 aa10.82□□□□□ -0.68
LINC00563-201ENST00000566370 OR5G3P0C626 314 aa10.82□□□□□ -0.68
LINC00563-201ENST00000566370 C8orf88P0DMB2 117 aa10.82□□□□□ -0.68
LINC00563-201ENST00000566370 ATP5G3P48201 142 aa10.82□□□□□ -0.68
LINC00563-201ENST00000566370 GNB1P62873 340 aa10.82□□□□□ -0.68
LINC00563-201ENST00000566370 TNXAQ16473 311 aa10.82□□□□□ -0.68
LINC00563-201ENST00000566370 ZNF841Q6ZN19 808 aa10.82□□□□□ -0.68
LINC00563-201ENST00000566370 OR10W1Q8NGF6 305 aa10.82□□□□□ -0.68
LINC00563-201ENST00000566370 IMMP2LQ96T52 175 aa10.82□□□□□ -0.68
LINC00563-201ENST00000566370 SRSF8Q9BRL6 282 aaKnown RBP10.82□□□□□ -0.68
LINC00563-201ENST00000566370 SRD5A3Q9H8P0 318 aa10.82□□□□□ -0.68
LINC00563-201ENST00000566370 LY96Q9Y6Y9 160 aa10.82□□□□□ -0.68
LINC00563-201ENST00000566370 OR7C2O60412 319 aa10.81□□□□□ -0.68
LINC00563-201ENST00000566370 LINC00869P0C866 280 aa10.81□□□□□ -0.68
LINC00563-201ENST00000566370 S100A2P29034 98 aa10.81□□□□□ -0.68
LINC00563-201ENST00000566370 MEOX2P50222 304 aa10.81□□□□□ -0.68
LINC00563-201ENST00000566370 PLGLAQ15195 96 aa10.81□□□□□ -0.68
LINC00563-201ENST00000566370 PSG5Q15238 335 aa10.81□□□□□ -0.68
LINC00563-201ENST00000566370 PRSS8Q16651 343 aa10.81□□□□□ -0.68
LINC00563-201ENST00000566370 ZNF114Q8NC26 417 aa10.81□□□□□ -0.68
LINC00563-201ENST00000566370 C12orf57Q99622 126 aa10.81□□□□□ -0.68
LINC00563-201ENST00000566370 TCRBV4S1A1TA0A5B7 111 aa10.8□□□□□ -0.68
LINC00563-201ENST00000566370 ZNF98A6NK75 572 aa10.8□□□□□ -0.68
LINC00563-201ENST00000566370 C9JCJ5 164 aa10.8□□□□□ -0.68
LINC00563-201ENST00000566370 LYNX1G3V0Z9 82 aa10.8□□□□□ -0.68
LINC00563-201ENST00000566370 IGHV2-5P01817 119 aa10.8□□□□□ -0.68
LINC00563-201ENST00000566370 FABP1P07148 127 aa10.8□□□□□ -0.68
LINC00563-201ENST00000566370 LYNX1P0DP58 116 aa10.8□□□□□ -0.68
LINC00563-201ENST00000566370 DEFA4P12838 97 aa10.8□□□□□ -0.68
LINC00563-201ENST00000566370 COX7A1P24310 79 aa10.8□□□□□ -0.68
LINC00563-201ENST00000566370 GRNP28799 593 aaKnown RBP10.8□□□□□ -0.68
LINC00563-201ENST00000566370 FAM3BP58499 235 aaPredicted RBP10.8□□□□□ -0.68
LINC00563-201ENST00000566370 LCN2P80188 198 aa10.8□□□□□ -0.68
LINC00563-201ENST00000566370 C11orf42Q8N5U0 333 aa10.8□□□□□ -0.68
LINC00563-201ENST00000566370 STXBP6Q8NFX7 210 aa10.8□□□□□ -0.68
LINC00563-201ENST00000566370 OR1L6Q8NGR2 347 aa10.8□□□□□ -0.68
LINC00563-201ENST00000566370 OR2T10Q8NGZ9 312 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms