RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 TATDN3Q17R31 274 aa6.34□□□□□ -1.39
CDH13-208ENST00000566333 BSXQ3C1V8 233 aa6.34□□□□□ -1.39
CDH13-208ENST00000566333 CXorf66Q5JRM2 361 aaPredicted RBP6.34□□□□□ -1.39
CDH13-208ENST00000566333 ETV3LQ6ZN32 361 aa6.34□□□□□ -1.39
CDH13-208ENST00000566333 NDUFA11Q86Y39 141 aa6.34□□□□□ -1.39
CDH13-208ENST00000566333 C12orf45Q8N5I9 185 aaPredicted RBP6.34□□□□□ -1.39
CDH13-208ENST00000566333 OR2C3Q8N628 320 aa6.34□□□□□ -1.39
CDH13-208ENST00000566333 ZNF114Q8NC26 417 aa6.34□□□□□ -1.39
CDH13-208ENST00000566333 OR4D5Q8NGN0 318 aa6.34□□□□□ -1.39
CDH13-208ENST00000566333 OR52E5Q8NH55 327 aa6.34□□□□□ -1.39
CDH13-208ENST00000566333 OR10C1Q96KK4 312 aa6.34□□□□□ -1.39
CDH13-208ENST00000566333 HINT2Q9BX68 163 aa6.34□□□□□ -1.39
CDH13-208ENST00000566333 GNB4Q9HAV0 340 aa6.34□□□□□ -1.39
CDH13-208ENST00000566333 PLEKHA3Q9HB20 300 aa6.34□□□□□ -1.39
CDH13-208ENST00000566333 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.34□□□□□ -1.39
CDH13-208ENST00000566333 TSSC4Q9Y5U2 329 aaPredicted RBP6.34□□□□□ -1.39
CDH13-208ENST00000566333 DNAH3Q8TD57 4116 aa6.34□□□□□ -1.4
CDH13-208ENST00000566333 A0A1W2PRX2 142 aa6.33□□□□□ -1.4
CDH13-208ENST00000566333 TCRBV4S1A1TA0A5B7 111 aa6.33□□□□□ -1.4
CDH13-208ENST00000566333 TSPAN15O95858 294 aa6.33□□□□□ -1.4
CDH13-208ENST00000566333 IFNA17P01571 189 aa6.33□□□□□ -1.4
CDH13-208ENST00000566333 TRGV3P03979 118 aa6.33□□□□□ -1.4
CDH13-208ENST00000566333 HOXA1P49639 335 aaPredicted RBP6.33□□□□□ -1.4
CDH13-208ENST00000566333 TPPP2P59282 170 aa6.33□□□□□ -1.4
CDH13-208ENST00000566333 SPCS3P61009 180 aa6.33□□□□□ -1.4
CDH13-208ENST00000566333 KHDC1LQ5JSQ8 128 aa6.33□□□□□ -1.4
CDH13-208ENST00000566333 PVRIGQ6DKI7 326 aa6.33□□□□□ -1.4
CDH13-208ENST00000566333 HSD17B13Q7Z5P4 300 aaPredicted RBP6.33□□□□□ -1.4
CDH13-208ENST00000566333 ZNF491Q8N8L2 437 aa6.33□□□□□ -1.4
CDH13-208ENST00000566333 TMEM170AQ8WVE7 144 aa6.33□□□□□ -1.4
CDH13-208ENST00000566333 C4orf3Q8WVX3 66 aa6.33□□□□□ -1.4
CDH13-208ENST00000566333 UBE2E2Q96LR5 201 aa6.33□□□□□ -1.4
CDH13-208ENST00000566333 MS4A10Q96PG2 267 aa6.33□□□□□ -1.4
CDH13-208ENST00000566333 P2RX4Q99571 388 aa6.33□□□□□ -1.4
CDH13-208ENST00000566333 SLA2Q9H6Q3 261 aa6.33□□□□□ -1.4
CDH13-208ENST00000566333 F11RQ9Y624 299 aaKnown RBP6.33□□□□□ -1.4
CDH13-208ENST00000566333 ALG5Q9Y673 324 aa6.33□□□□□ -1.4
CDH13-208ENST00000566333 MFSD2BA6NFX1 497 aa6.32□□□□□ -1.4
CDH13-208ENST00000566333 FAM90A26D6RGX4 464 aa6.32□□□□□ -1.4
CDH13-208ENST00000566333 I3L521 148 aa6.32□□□□□ -1.4
CDH13-208ENST00000566333 OR2J3O76001 311 aa6.32□□□□□ -1.4
CDH13-208ENST00000566333 DHFRP00374 187 aa6.32□□□□□ -1.4
CDH13-208ENST00000566333 RNASE2P10153 161 aaKnown RBP6.32□□□□□ -1.4
CDH13-208ENST00000566333 CDX1P47902 265 aaPredicted RBP6.32□□□□□ -1.4
CDH13-208ENST00000566333 RHOGP84095 191 aa6.32□□□□□ -1.4
CDH13-208ENST00000566333 RUNX1Q01196 453 aa6.32□□□□□ -1.4
CDH13-208ENST00000566333 IL15RAQ13261 267 aa6.32□□□□□ -1.4
CDH13-208ENST00000566333 IAH1Q2TAA2 248 aaPredicted RBP6.32□□□□□ -1.4
CDH13-208ENST00000566333 DEFB136Q30KP8 78 aa6.32□□□□□ -1.4
CDH13-208ENST00000566333 NSUN5P1Q3KNT7 163 aa6.32□□□□□ -1.4
CDH13-208ENST00000566333 C8orf86Q6ZUL3 223 aa6.32□□□□□ -1.4
CDH13-208ENST00000566333 ZBTB8BQ8NAP8 495 aaPredicted RBP6.32□□□□□ -1.4
CDH13-208ENST00000566333 NECAP1Q8NC96 275 aa6.32□□□□□ -1.4
CDH13-208ENST00000566333 KLHL30-AS1Q8NEE0 82 aa6.32□□□□□ -1.4
CDH13-208ENST00000566333 OR1P1Q8NH06 330 aa6.32□□□□□ -1.4
CDH13-208ENST00000566333 OR1S1Q8NH92 325 aa6.32□□□□□ -1.4
CDH13-208ENST00000566333 CCDC140Q96MF4 163 aa6.32□□□□□ -1.4
CDH13-208ENST00000566333 PDCD10Q9BUL8 212 aa6.32□□□□□ -1.4
CDH13-208ENST00000566333 RBKSQ9H477 322 aa6.32□□□□□ -1.4
CDH13-208ENST00000566333 GPN1Q9HCN4 374 aaPredicted RBP6.32□□□□□ -1.4
CDH13-208ENST00000566333 RCL1Q9Y2P8 373 aaKnown RBP6.32□□□□□ -1.4
CDH13-208ENST00000566333 FAM223BA6NKX1 122 aa6.31□□□□□ -1.4
CDH13-208ENST00000566333 K7EIM0 57 aa6.31□□□□□ -1.4
CDH13-208ENST00000566333 NDUFB8O95169 186 aa6.31□□□□□ -1.4
CDH13-208ENST00000566333 TMEM50AO95807 157 aa6.31□□□□□ -1.4
CDH13-208ENST00000566333 IFNA21P01568 189 aa6.31□□□□□ -1.4
CDH13-208ENST00000566333 TRBV12-3P01733 135 aa6.31□□□□□ -1.4
CDH13-208ENST00000566333 IGHV3-11P01762 117 aa6.31□□□□□ -1.4
CDH13-208ENST00000566333 LGALS1P09382 135 aaKnown RBP6.31□□□□□ -1.4
CDH13-208ENST00000566333 H2BFSP57053 126 aa6.31□□□□□ -1.4
CDH13-208ENST00000566333 FHL3Q13643 280 aa6.31□□□□□ -1.4
CDH13-208ENST00000566333 EXOSC2Q13868 293 aaKnown RBP6.31□□□□□ -1.4
CDH13-208ENST00000566333 C15orf32Q32M92 178 aa6.31□□□□□ -1.4
CDH13-208ENST00000566333 TMEM65Q6PI78 240 aa6.31□□□□□ -1.4
CDH13-208ENST00000566333 FAM223AQ8IWN6 122 aa6.31□□□□□ -1.4
CDH13-208ENST00000566333 UXS1Q8NBZ7 420 aa6.31□□□□□ -1.4
CDH13-208ENST00000566333 DTD1Q8TEA8 209 aa6.31□□□□□ -1.4
CDH13-208ENST00000566333 RAX2Q96IS3 184 aa6.31□□□□□ -1.4
CDH13-208ENST00000566333 MAGT1Q9H0U3 335 aa6.31□□□□□ -1.4
CDH13-208ENST00000566333 ZNF355PQ9NSJ1 428 aa6.31□□□□□ -1.4
CDH13-208ENST00000566333 ZFP57Q9NU63 452 aa6.31□□□□□ -1.4
CDH13-208ENST00000566333 C15orf62A8K5M9 175 aa6.3□□□□□ -1.4
CDH13-208ENST00000566333 CEBPZOSA8MTT3 80 aa6.3□□□□□ -1.4
CDH13-208ENST00000566333 F8W735 103 aaPredicted RBP6.3□□□□□ -1.4
CDH13-208ENST00000566333 I3L2K1 104 aa6.3□□□□□ -1.4
CDH13-208ENST00000566333 GOSR2O14653 212 aa6.3□□□□□ -1.4
CDH13-208ENST00000566333 SYNGR2O43760 224 aa6.3□□□□□ -1.4
CDH13-208ENST00000566333 SIX6O95475 246 aa6.3□□□□□ -1.4
CDH13-208ENST00000566333 MBPP02686 304 aaPredicted RBP6.3□□□□□ -1.4
CDH13-208ENST00000566333 IAPPP10997 89 aa6.3□□□□□ -1.4
CDH13-208ENST00000566333 DEFA4P12838 97 aa6.3□□□□□ -1.4
CDH13-208ENST00000566333 NKX2-1P43699 371 aaPredicted RBP6.3□□□□□ -1.4
CDH13-208ENST00000566333 POLR2GP62487 172 aaKnown RBP eCLIP6.3□□□□□ -1.4
CDH13-208ENST00000566333 ID3Q02535 119 aa6.3□□□□□ -1.4
CDH13-208ENST00000566333 ZNF343Q6P1L6 599 aa6.3□□□□□ -1.4
CDH13-208ENST00000566333 MRPL41Q8IXM3 137 aaKnown RBP6.3□□□□□ -1.4
CDH13-208ENST00000566333 SLC24A4Q8NFF2 622 aa6.3□□□□□ -1.4
CDH13-208ENST00000566333 WDR89Q96FK6 387 aaPredicted RBP6.3□□□□□ -1.4
CDH13-208ENST00000566333 ZNF414Q96IQ9 312 aa6.3□□□□□ -1.4
CDH13-208ENST00000566333 USMG5Q96IX5 58 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms