RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 MINOS1Q5TGZ0 78 aa13.51□□□□□ -0.25
RAB40C-210ENST00000566290 ETV3LQ6ZN32 361 aa13.51□□□□□ -0.25
RAB40C-210ENST00000566290 TMEM170AQ8WVE7 144 aa13.51□□□□□ -0.25
RAB40C-210ENST00000566290 MINOS1-NBL1R4GNA1 71 aa13.51□□□□□ -0.25
RAB40C-210ENST00000566290 A0A1W2PPI3 338 aa13.5□□□□□ -0.25
RAB40C-210ENST00000566290 VWC2LB2RUY7 222 aa13.5□□□□□ -0.25
RAB40C-210ENST00000566290 RNASEK-C17orf49H0YIS7 233 aa13.5□□□□□ -0.25
RAB40C-210ENST00000566290 TSPAN9O75954 239 aa13.5□□□□□ -0.25
RAB40C-210ENST00000566290 HTR1DP28221 377 aa13.5□□□□□ -0.25
RAB40C-210ENST00000566290 TAGLN2P37802 199 aaKnown RBP13.5□□□□□ -0.25
RAB40C-210ENST00000566290 DSCR9P59020 149 aa13.5□□□□□ -0.25
RAB40C-210ENST00000566290 TPTE2P1Q5T6R2 138 aa13.5□□□□□ -0.25
RAB40C-210ENST00000566290 PVRIGQ6DKI7 326 aa13.5□□□□□ -0.25
RAB40C-210ENST00000566290 MMD2Q8IY49 270 aa13.5□□□□□ -0.25
RAB40C-210ENST00000566290 RPEQ96AT9 228 aa13.5□□□□□ -0.25
RAB40C-210ENST00000566290 SRSF8Q9BRL6 282 aaKnown RBP13.5□□□□□ -0.25
RAB40C-210ENST00000566290 RSG1Q9BU20 258 aa13.5□□□□□ -0.25
RAB40C-210ENST00000566290 NPCDR1Q9BY65 106 aa13.5□□□□□ -0.25
RAB40C-210ENST00000566290 COMMD5Q9GZQ3 224 aa13.5□□□□□ -0.25
RAB40C-210ENST00000566290 DPM3Q9P2X0 92 aa13.5□□□□□ -0.25
RAB40C-210ENST00000566290 ONECUT1Q9UBC0 465 aa13.5□□□□□ -0.25
RAB40C-210ENST00000566290 LSM4Q9Y4Z0 139 aaKnown RBP13.5□□□□□ -0.25
RAB40C-210ENST00000566290 IGHV2-70DA0A0C4DH43 119 aa13.49□□□□□ -0.25
RAB40C-210ENST00000566290 FGF7P21781 194 aa13.49□□□□□ -0.25
RAB40C-210ENST00000566290 FHITP49789 147 aa13.49□□□□□ -0.25
RAB40C-210ENST00000566290 LMO4P61968 165 aa13.49□□□□□ -0.25
RAB40C-210ENST00000566290 RPS16P62249 146 aaKnown RBP13.49□□□□□ -0.25
RAB40C-210ENST00000566290 DIAPH2-AS1Q14236 149 aa13.49□□□□□ -0.25
RAB40C-210ENST00000566290 GUK1Q16774 197 aa13.49□□□□□ -0.25
RAB40C-210ENST00000566290 HCP5Q6MZN7 132 aa13.49□□□□□ -0.25
RAB40C-210ENST00000566290 CCDC144NLQ6NUI1 221 aa13.49□□□□□ -0.25
RAB40C-210ENST00000566290 SVBPQ8N300 66 aa13.49□□□□□ -0.25
RAB40C-210ENST00000566290 ZNF114Q8NC26 417 aa13.49□□□□□ -0.25
RAB40C-210ENST00000566290 CACNG8Q8WXS5 425 aa13.49□□□□□ -0.25
RAB40C-210ENST00000566290 SIRPDQ9H106 197 aa13.49□□□□□ -0.25
RAB40C-210ENST00000566290 RPRMQ9NS64 109 aa13.49□□□□□ -0.25
RAB40C-210ENST00000566290 INSIG2Q9Y5U4 225 aa13.49□□□□□ -0.25
RAB40C-210ENST00000566290 MALRD1Q5VYJ5 2156 aa13.49□□□□□ -0.25
RAB40C-210ENST00000566290 DOCK11Q5JSL3 2073 aa13.49□□□□□ -0.25
RAB40C-210ENST00000566290 RRHO14718 337 aa13.48□□□□□ -0.25
RAB40C-210ENST00000566290 FOXH1O75593 365 aa13.48□□□□□ -0.25
RAB40C-210ENST00000566290 SLC25A16P16260 332 aa13.48□□□□□ -0.25
RAB40C-210ENST00000566290 OPRK1P41145 380 aa13.48□□□□□ -0.25
RAB40C-210ENST00000566290 REG1BP48304 166 aa13.48□□□□□ -0.25
RAB40C-210ENST00000566290 PNKDQ8N490 385 aa13.48□□□□□ -0.25
RAB40C-210ENST00000566290 ZNF709Q8N972 641 aa13.48□□□□□ -0.25
RAB40C-210ENST00000566290 OR10G4Q8NGN3 311 aa13.48□□□□□ -0.25
RAB40C-210ENST00000566290 NPVFQ9HCQ7 196 aa13.48□□□□□ -0.25
RAB40C-210ENST00000566290 YAE1D1Q9NRH1 226 aa13.48□□□□□ -0.25
RAB40C-210ENST00000566290 TBL2Q9Y4P3 447 aaKnown RBP13.48□□□□□ -0.25
RAB40C-210ENST00000566290 TET2Q6N021 2002 aaPredicted RBP13.47□□□□□ -0.25
RAB40C-210ENST00000566290 IGHV4-61A0A0C4DH41 118 aa13.47□□□□□ -0.25
RAB40C-210ENST00000566290 SEC14L6B5MCN3 397 aa13.47□□□□□ -0.25
RAB40C-210ENST00000566290 CA2P00918 260 aa13.47□□□□□ -0.25
RAB40C-210ENST00000566290 RNASE2P10153 161 aaKnown RBP13.47□□□□□ -0.25
RAB40C-210ENST00000566290 GPX4P36969 197 aaPredicted RBP13.47□□□□□ -0.25
RAB40C-210ENST00000566290 COMPP49747 757 aaPredicted RBP13.47□□□□□ -0.25
RAB40C-210ENST00000566290 LOXL1Q08397 574 aaPredicted RBP13.47□□□□□ -0.25
RAB40C-210ENST00000566290 MRGPRG-AS1Q2M3A8 158 aa13.47□□□□□ -0.25
RAB40C-210ENST00000566290 ZNF506Q5JVG8 444 aa13.47□□□□□ -0.25
RAB40C-210ENST00000566290 TREML4Q6UXN2 200 aa13.47□□□□□ -0.25
RAB40C-210ENST00000566290 RNASEH2CQ8TDP1 164 aaKnown RBP13.47□□□□□ -0.25
RAB40C-210ENST00000566290 RCC1LQ96I51 464 aaKnown RBP13.47□□□□□ -0.25
RAB40C-210ENST00000566290 C19orf24Q9BVV8 132 aa13.47□□□□□ -0.25
RAB40C-210ENST00000566290 BPESC1Q9GZL8 116 aa13.47□□□□□ -0.25
RAB40C-210ENST00000566290 TREM1Q9NP99 234 aa13.47□□□□□ -0.25
RAB40C-210ENST00000566290 CTXND1A0A1B0GTU2 59 aa13.46□□□□□ -0.25
RAB40C-210ENST00000566290 HSPB1P04792 205 aaKnown RBP13.46□□□□□ -0.25
RAB40C-210ENST00000566290 ADCYAP1P18509 176 aa13.46□□□□□ -0.25
RAB40C-210ENST00000566290 ERHP84090 104 aaKnown RBP13.46□□□□□ -0.25
RAB40C-210ENST00000566290 SRSF2Q01130 221 aaKnown RBP13.46□□□□□ -0.25
RAB40C-210ENST00000566290 PRSS8Q16651 343 aa13.46□□□□□ -0.25
RAB40C-210ENST00000566290 KHDC3LQ587J8 217 aa13.46□□□□□ -0.25
RAB40C-210ENST00000566290 SPINK9Q5DT21 86 aa13.46□□□□□ -0.25
RAB40C-210ENST00000566290 CLDND2Q8NHS1 167 aa13.46□□□□□ -0.25
RAB40C-210ENST00000566290 CFHR4Q92496 578 aa13.46□□□□□ -0.25
RAB40C-210ENST00000566290 NARS2Q96I59 477 aaKnown RBP13.46□□□□□ -0.25
RAB40C-210ENST00000566290 PIMREGQ9BSJ6 248 aa13.46□□□□□ -0.25
RAB40C-210ENST00000566290 ZNF430Q9H8G1 570 aaPredicted RBP13.46□□□□□ -0.25
RAB40C-210ENST00000566290 NDUFA3O95167 84 aa13.45□□□□□ -0.26
RAB40C-210ENST00000566290 IFNA4P05014 189 aa13.45□□□□□ -0.26
RAB40C-210ENST00000566290 COX7A1P24310 79 aa13.45□□□□□ -0.26
RAB40C-210ENST00000566290 SUB1P53999 127 aaKnown RBP eCLIP13.45□□□□□ -0.26
RAB40C-210ENST00000566290 ARF6P62330 175 aa13.45□□□□□ -0.26
RAB40C-210ENST00000566290 SRSF3P84103 164 aaKnown RBP13.45□□□□□ -0.26
RAB40C-210ENST00000566290 EBI3Q14213 229 aa13.45□□□□□ -0.26
RAB40C-210ENST00000566290 PSG5Q15238 335 aa13.45□□□□□ -0.26
RAB40C-210ENST00000566290 ACOT6Q3I5F7 207 aaPredicted RBP13.45□□□□□ -0.26
RAB40C-210ENST00000566290 NPBQ8NG41 125 aa13.45□□□□□ -0.26
RAB40C-210ENST00000566290 SIGLEC9Q9Y336 463 aa13.45□□□□□ -0.26
RAB40C-210ENST00000566290 RBFOX3A6NFN3 312 aa13.44□□□□□ -0.26
RAB40C-210ENST00000566290 CGB1A6NKQ9 187 aa13.44□□□□□ -0.26
RAB40C-210ENST00000566290 F8W036 122 aa13.44□□□□□ -0.26
RAB40C-210ENST00000566290 CD5LO43866 347 aa13.44□□□□□ -0.26
RAB40C-210ENST00000566290 VENTXO95231 258 aa13.44□□□□□ -0.26
RAB40C-210ENST00000566290 SNAPINO95295 136 aa13.44□□□□□ -0.26
RAB40C-210ENST00000566290 APOC3P02656 99 aa13.44□□□□□ -0.26
RAB40C-210ENST00000566290 SFTA3P0C7M3 94 aa13.44□□□□□ -0.26
RAB40C-210ENST00000566290 IGHV4-31P0DP07 118 aa13.44□□□□□ -0.26
RAB40C-210ENST00000566290 RPL29P47914 159 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms