RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 COQ8AQ8NI60 647 aa12.38□□□□□ -0.43
RAB40C-208ENST00000564703 CACNG5Q9UF02 275 aa12.38□□□□□ -0.43
RAB40C-208ENST00000564703 C9orf170A2RU37 121 aa12.37□□□□□ -0.43
RAB40C-208ENST00000564703 DUS4LO95620 317 aaKnown RBP12.37□□□□□ -0.43
RAB40C-208ENST00000564703 SUB1P53999 127 aaKnown RBP eCLIP12.37□□□□□ -0.43
RAB40C-208ENST00000564703 SPCS3P61009 180 aa12.37□□□□□ -0.43
RAB40C-208ENST00000564703 C15orf32Q32M92 178 aa12.37□□□□□ -0.43
RAB40C-208ENST00000564703 ZNF343Q6P1L6 599 aa12.37□□□□□ -0.43
RAB40C-208ENST00000564703 Q6ZRM9 215 aa12.37□□□□□ -0.43
RAB40C-208ENST00000564703 CXorf58Q96LI9 332 aa12.37□□□□□ -0.43
RAB40C-208ENST00000564703 MCRIP2Q9BUT9 160 aaKnown RBP12.37□□□□□ -0.43
RAB40C-208ENST00000564703 ALX4Q9H161 411 aaPredicted RBP12.37□□□□□ -0.43
RAB40C-208ENST00000564703 PEF1Q9UBV8 284 aaKnown RBP12.37□□□□□ -0.43
RAB40C-208ENST00000564703 TRAV6A0A075B6T7 132 aa12.36□□□□□ -0.43
RAB40C-208ENST00000564703 A0A0G2JRQ6 117 aa12.36□□□□□ -0.43
RAB40C-208ENST00000564703 A0A1B0GU03 582 aa12.36□□□□□ -0.43
RAB40C-208ENST00000564703 NDUFB8O95169 186 aa12.36□□□□□ -0.43
RAB40C-208ENST00000564703 ANXA7P20073 488 aaKnown RBP12.36□□□□□ -0.43
RAB40C-208ENST00000564703 ZP3P21754 424 aa12.36□□□□□ -0.43
RAB40C-208ENST00000564703 HOXA1P49639 335 aaPredicted RBP12.36□□□□□ -0.43
RAB40C-208ENST00000564703 DEFA5Q01523 94 aa12.36□□□□□ -0.43
RAB40C-208ENST00000564703 SMCO1Q147U7 214 aa12.36□□□□□ -0.43
RAB40C-208ENST00000564703 ANKRD55Q3KP44 614 aa12.36□□□□□ -0.43
RAB40C-208ENST00000564703 ETV3LQ6ZN32 361 aa12.36□□□□□ -0.43
RAB40C-208ENST00000564703 LYG2Q86SG7 212 aa12.36□□□□□ -0.43
RAB40C-208ENST00000564703 OR2C3Q8N628 320 aa12.36□□□□□ -0.43
RAB40C-208ENST00000564703 LINC00482Q8N8I6 264 aa12.36□□□□□ -0.43
RAB40C-208ENST00000564703 LRTM2Q8N967 370 aa12.36□□□□□ -0.43
RAB40C-208ENST00000564703 OR52E5Q8NH55 327 aa12.36□□□□□ -0.43
RAB40C-208ENST00000564703 OR1S1Q8NH92 325 aa12.36□□□□□ -0.43
RAB40C-208ENST00000564703 ENKURQ8TC29 256 aa12.36□□□□□ -0.43
RAB40C-208ENST00000564703 EEF1AKMT3Q96AZ1 226 aa12.36□□□□□ -0.43
RAB40C-208ENST00000564703 RCC1LQ96I51 464 aaKnown RBP12.36□□□□□ -0.43
RAB40C-208ENST00000564703 FANCD2OSQ96PS1 177 aa12.36□□□□□ -0.43
RAB40C-208ENST00000564703 C20orf85Q9H1P6 137 aa12.36□□□□□ -0.43
RAB40C-208ENST00000564703 TMED3Q9Y3Q3 217 aa12.36□□□□□ -0.43
RAB40C-208ENST00000564703 F11RQ9Y624 299 aaKnown RBP12.36□□□□□ -0.43
RAB40C-208ENST00000564703 DNHD1Q96M86 4753 aa12.35□□□□□ -0.43
RAB40C-208ENST00000564703 IGLV11-55A0A075B6I3 123 aa12.35□□□□□ -0.43
RAB40C-208ENST00000564703 CEBPZOSA8MTT3 80 aa12.35□□□□□ -0.43
RAB40C-208ENST00000564703 IFNA21P01568 189 aa12.35□□□□□ -0.43
RAB40C-208ENST00000564703 H2AFB2P0C5Z0 115 aa12.35□□□□□ -0.43
RAB40C-208ENST00000564703 EXOSC2Q13868 293 aaKnown RBP12.35□□□□□ -0.43
RAB40C-208ENST00000564703 TATDN3Q17R31 274 aa12.35□□□□□ -0.43
RAB40C-208ENST00000564703 SPINK9Q5DT21 86 aa12.35□□□□□ -0.43
RAB40C-208ENST00000564703 C19orf35Q6ZS72 473 aa12.35□□□□□ -0.43
RAB40C-208ENST00000564703 OR1P1Q8NH06 330 aa12.35□□□□□ -0.43
RAB40C-208ENST00000564703 GPR61Q9BZJ8 451 aa12.35□□□□□ -0.43
RAB40C-208ENST00000564703 NUDT15Q9NV35 164 aa12.35□□□□□ -0.43
RAB40C-208ENST00000564703 TBC1D24Q9ULP9 559 aa12.35□□□□□ -0.43
RAB40C-208ENST00000564703 IGHV4OR15-8A0A075B7B6 117 aa12.34□□□□□ -0.43
RAB40C-208ENST00000564703 A0A087WW49 117 aa12.34□□□□□ -0.43
RAB40C-208ENST00000564703 TRBV7-1A0A0A6YYK4 115 aa12.34□□□□□ -0.43
RAB40C-208ENST00000564703 HOXB5P09067 269 aa12.34□□□□□ -0.43
RAB40C-208ENST00000564703 DHRS2Q13268 280 aa12.34□□□□□ -0.43
RAB40C-208ENST00000564703 KLK9Q2XQG4 91 aa12.34□□□□□ -0.43
RAB40C-208ENST00000564703 NMSQ5H8A3 153 aa12.34□□□□□ -0.43
RAB40C-208ENST00000564703 HIPK2Q9H2X6 1198 aa12.34□□□□□ -0.43
RAB40C-208ENST00000564703 HEYLQ9NQ87 328 aaPredicted RBP12.34□□□□□ -0.43
RAB40C-208ENST00000564703 KLK9Q9UKQ9 250 aa12.34□□□□□ -0.43
RAB40C-208ENST00000564703 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.33□□□□□ -0.44
RAB40C-208ENST00000564703 INS-IGF2F8WCM5 200 aa12.33□□□□□ -0.44
RAB40C-208ENST00000564703 IGLL1P15814 213 aa12.33□□□□□ -0.44
RAB40C-208ENST00000564703 IFITM3Q01628 133 aa12.33□□□□□ -0.44
RAB40C-208ENST00000564703 FHL3Q13643 280 aa12.33□□□□□ -0.44
RAB40C-208ENST00000564703 RPEL1Q2QD12 228 aa12.33□□□□□ -0.44
RAB40C-208ENST00000564703 VN1R17PQ8TDU5 208 aa12.33□□□□□ -0.44
RAB40C-208ENST00000564703 DCUN1D4Q92564 292 aa12.33□□□□□ -0.44
RAB40C-208ENST00000564703 MISP3Q96FF7 219 aa12.33□□□□□ -0.44
RAB40C-208ENST00000564703 OVOL1O14753 267 aa12.32□□□□□ -0.44
RAB40C-208ENST00000564703 IGHV3-23P01764 117 aa12.32□□□□□ -0.44
RAB40C-208ENST00000564703 SLC25A6P12236 298 aa12.32□□□□□ -0.44
RAB40C-208ENST00000564703 SLURP1P55000 103 aa12.32□□□□□ -0.44
RAB40C-208ENST00000564703 AARDQ4LEZ3 155 aa12.32□□□□□ -0.44
RAB40C-208ENST00000564703 OXLD1Q5BKU9 147 aa12.32□□□□□ -0.44
RAB40C-208ENST00000564703 PLET1Q6UQ28 207 aa12.32□□□□□ -0.44
RAB40C-208ENST00000564703 CLEC19AQ6UXS0 136 aa12.32□□□□□ -0.44
RAB40C-208ENST00000564703 UXS1Q8NBZ7 420 aa12.32□□□□□ -0.44
RAB40C-208ENST00000564703 DLX4Q92988 240 aaPredicted RBP12.32□□□□□ -0.44
RAB40C-208ENST00000564703 NOTCH3Q9UM47 2321 aa12.32□□□□□ -0.44
RAB40C-208ENST00000564703 MGAM2Q2M2H8 2515 aa12.32□□□□□ -0.44
RAB40C-208ENST00000564703 CORTO00230 105 aa12.31□□□□□ -0.44
RAB40C-208ENST00000564703 MED6O75586 246 aa12.31□□□□□ -0.44
RAB40C-208ENST00000564703 NXPH3O95157 252 aa12.31□□□□□ -0.44
RAB40C-208ENST00000564703 CLEC3BP05452 202 aa12.31□□□□□ -0.44
RAB40C-208ENST00000564703 HOXD3P31249 432 aaPredicted RBP12.31□□□□□ -0.44
RAB40C-208ENST00000564703 HTR2BP41595 481 aa12.31□□□□□ -0.44
RAB40C-208ENST00000564703 TNFRSF9Q07011 255 aa12.31□□□□□ -0.44
RAB40C-208ENST00000564703 GGNBP1Q5YKI7 109 aa12.31□□□□□ -0.44
RAB40C-208ENST00000564703 NOXA1Q86UR1 476 aa12.31□□□□□ -0.44
RAB40C-208ENST00000564703 ZNF114Q8NC26 417 aa12.31□□□□□ -0.44
RAB40C-208ENST00000564703 DUSP18Q8NEJ0 188 aa12.31□□□□□ -0.44
RAB40C-208ENST00000564703 ELOVL1Q9BW60 279 aa12.31□□□□□ -0.44
RAB40C-208ENST00000564703 S4R3C0 116 aa12.31□□□□□ -0.44
RAB40C-208ENST00000564703 PKD1L1Q8TDX9 2849 aa12.31□□□□□ -0.44
RAB40C-208ENST00000564703 GGCTO75223 188 aaKnown RBP12.3□□□□□ -0.44
RAB40C-208ENST00000564703 ARL3P36405 182 aa12.3□□□□□ -0.44
RAB40C-208ENST00000564703 PDLIM3Q53GG5 364 aaPredicted RBP12.3□□□□□ -0.44
RAB40C-208ENST00000564703 ZNF431Q8TF32 576 aaPredicted RBP12.3□□□□□ -0.44
RAB40C-208ENST00000564703 SCARB1Q8WTV0 552 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms