RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 PRRT1Q99946 306 aa13.95□□□□□ -0.18
SYNGR3-204ENST00000564642 SOSTQ9BQB4 213 aa13.95□□□□□ -0.18
SYNGR3-204ENST00000564642 ZC4H2Q9NQZ6 224 aa13.95□□□□□ -0.18
SYNGR3-204ENST00000564642 GPR183P32249 361 aa13.94□□□□□ -0.18
SYNGR3-204ENST00000564642 HSPE1P61604 102 aaKnown RBP13.94□□□□□ -0.18
SYNGR3-204ENST00000564642 PLET1Q6UQ28 207 aa13.94□□□□□ -0.18
SYNGR3-204ENST00000564642 OR51S1Q8NGJ8 323 aa13.94□□□□□ -0.18
SYNGR3-204ENST00000564642 DYNLRB2Q8TF09 96 aa13.94□□□□□ -0.18
SYNGR3-204ENST00000564642 ASCL2Q99929 193 aa13.94□□□□□ -0.18
SYNGR3-204ENST00000564642 THAP7Q9BT49 309 aaPredicted RBP13.94□□□□□ -0.18
SYNGR3-204ENST00000564642 SCP2D1Q9UJQ7 156 aa13.94□□□□□ -0.18
SYNGR3-204ENST00000564642 IGKV1-5P01602 117 aa13.93□□□□□ -0.18
SYNGR3-204ENST00000564642 UCP1P25874 307 aa13.93□□□□□ -0.18
SYNGR3-204ENST00000564642 ERHP84090 104 aaKnown RBP13.93□□□□□ -0.18
SYNGR3-204ENST00000564642 PRCDQ00LT1 54 aa13.93□□□□□ -0.18
SYNGR3-204ENST00000564642 IZUMO4Q1ZYL8 232 aa13.93□□□□□ -0.18
SYNGR3-204ENST00000564642 PYDC2Q56P42 97 aa13.93□□□□□ -0.18
SYNGR3-204ENST00000564642 OR2K2Q8NGT1 345 aa13.93□□□□□ -0.18
SYNGR3-204ENST00000564642 RNASE11Q8TAA1 199 aaKnown RBP13.93□□□□□ -0.18
SYNGR3-204ENST00000564642 RRNAD1Q96FB5 475 aaKnown RBP13.93□□□□□ -0.18
SYNGR3-204ENST00000564642 RTBDNQ9BSG5 229 aaPredicted RBP13.93□□□□□ -0.18
SYNGR3-204ENST00000564642 PDCD10Q9BUL8 212 aa13.93□□□□□ -0.18
SYNGR3-204ENST00000564642 GPR132Q9UNW8 380 aa13.93□□□□□ -0.18
SYNGR3-204ENST00000564642 C2orf70A6NJV1 201 aa13.92□□□□□ -0.18
SYNGR3-204ENST00000564642 FOLR2P14207 255 aa13.92□□□□□ -0.18
SYNGR3-204ENST00000564642 MFAP2P55001 183 aa13.92□□□□□ -0.18
SYNGR3-204ENST00000564642 GTSCR1Q86UQ5 136 aa13.92□□□□□ -0.18
SYNGR3-204ENST00000564642 OR2C3Q8N628 320 aa13.92□□□□□ -0.18
SYNGR3-204ENST00000564642 OR1P1Q8NH06 330 aa13.92□□□□□ -0.18
SYNGR3-204ENST00000564642 SCGB3A2Q96PL1 93 aa13.92□□□□□ -0.18
SYNGR3-204ENST00000564642 RBM38Q9H0Z9 239 aaKnown RBP13.92□□□□□ -0.18
SYNGR3-204ENST00000564642 PLEKHA3Q9HB20 300 aa13.92□□□□□ -0.18
SYNGR3-204ENST00000564642 PALMDQ9NP74 551 aa13.92□□□□□ -0.18
SYNGR3-204ENST00000564642 MCUBQ9NWR8 336 aa13.92□□□□□ -0.18
SYNGR3-204ENST00000564642 C21orf62Q9NYP8 219 aa13.92□□□□□ -0.18
SYNGR3-204ENST00000564642 IGHV3-21A0A0B4J1V1 117 aa13.91□□□□□ -0.18
SYNGR3-204ENST00000564642 OR2T8A6NH00 312 aa13.91□□□□□ -0.18
SYNGR3-204ENST00000564642 ZNF701M0R085 212 aaPredicted RBP13.91□□□□□ -0.18
SYNGR3-204ENST00000564642 TGOLN2O43493 480 aa13.91□□□□□ -0.18
SYNGR3-204ENST00000564642 IFNA17P01571 189 aa13.91□□□□□ -0.18
SYNGR3-204ENST00000564642 OR5AC1P0C628 307 aa13.91□□□□□ -0.18
SYNGR3-204ENST00000564642 DHODHQ02127 395 aa13.91□□□□□ -0.18
SYNGR3-204ENST00000564642 ADAMTSL5Q6ZMM2 481 aa13.91□□□□□ -0.18
SYNGR3-204ENST00000564642 SGPP2Q8IWX5 399 aa13.91□□□□□ -0.18
SYNGR3-204ENST00000564642 Q8N1Y9 231 aa13.91□□□□□ -0.18
SYNGR3-204ENST00000564642 SCARB1Q8WTV0 552 aa13.91□□□□□ -0.18
SYNGR3-204ENST00000564642 C5orf66Q9H5L9 145 aa13.91□□□□□ -0.18
SYNGR3-204ENST00000564642 NAA60Q9H7X0 242 aa13.91□□□□□ -0.18
SYNGR3-204ENST00000564642 SLC2A8Q9NY64 477 aa13.91□□□□□ -0.18
SYNGR3-204ENST00000564642 TECRQ9NZ01 308 aaKnown RBP13.91□□□□□ -0.18
SYNGR3-204ENST00000564642 IGHV3-35A0A0C4DH35 117 aa13.9□□□□□ -0.18
SYNGR3-204ENST00000564642 IZUMO1RA6ND01 250 aa13.9□□□□□ -0.18
SYNGR3-204ENST00000564642 CDS2O95674 445 aa13.9□□□□□ -0.18
SYNGR3-204ENST00000564642 FRMD6-AS1P0C7T7 363 aa13.9□□□□□ -0.18
SYNGR3-204ENST00000564642 P0C879 139 aa13.9□□□□□ -0.18
SYNGR3-204ENST00000564642 CBLN1P23435 193 aa13.9□□□□□ -0.18
SYNGR3-204ENST00000564642 FAUP35544 74 aaKnown RBP13.9□□□□□ -0.18
SYNGR3-204ENST00000564642 DEFB114Q30KQ6 69 aa13.9□□□□□ -0.18
SYNGR3-204ENST00000564642 CD300EQ496F6 205 aaPredicted RBP13.9□□□□□ -0.18
SYNGR3-204ENST00000564642 SLC35G3Q8N808 338 aa13.9□□□□□ -0.18
SYNGR3-204ENST00000564642 UBAC2Q8NBM4 344 aa13.9□□□□□ -0.18
SYNGR3-204ENST00000564642 MISP3Q96FF7 219 aa13.9□□□□□ -0.18
SYNGR3-204ENST00000564642 BSCL2Q96G97 398 aaPredicted RBP13.9□□□□□ -0.18
SYNGR3-204ENST00000564642 TMEM222Q9H0R3 208 aa13.9□□□□□ -0.18
SYNGR3-204ENST00000564642 A0A0B4J293 547 aa13.89□□□□□ -0.19
SYNGR3-204ENST00000564642 CRYM-AS1A6NIL9 109 aa13.89□□□□□ -0.19
SYNGR3-204ENST00000564642 ST8SIA3O43173 380 aa13.89□□□□□ -0.19
SYNGR3-204ENST00000564642 IGHV4-30-4P0DP06 118 aa13.89□□□□□ -0.19
SYNGR3-204ENST00000564642 EDN2P20800 178 aa13.89□□□□□ -0.19
SYNGR3-204ENST00000564642 SNCAP37840 140 aa13.89□□□□□ -0.19
SYNGR3-204ENST00000564642 AP3S2P59780 193 aa13.89□□□□□ -0.19
SYNGR3-204ENST00000564642 Q56UQ5 140 aa13.89□□□□□ -0.19
SYNGR3-204ENST00000564642 SPINK9Q5DT21 86 aa13.89□□□□□ -0.19
SYNGR3-204ENST00000564642 SPSB3Q6PJ21 355 aa13.89□□□□□ -0.19
SYNGR3-204ENST00000564642 FAM219AQ8IW50 185 aa13.89□□□□□ -0.19
SYNGR3-204ENST00000564642 TOMM5Q8N4H5 51 aa13.89□□□□□ -0.19
SYNGR3-204ENST00000564642 GLYATL2Q8WU03 294 aa13.89□□□□□ -0.19
SYNGR3-204ENST00000564642 ATP6V0BQ99437 205 aa13.89□□□□□ -0.19
SYNGR3-204ENST00000564642 GAR1Q9NY12 217 aaKnown RBP13.89□□□□□ -0.19
SYNGR3-204ENST00000564642 KCNIP3Q9Y2W7 256 aa13.89□□□□□ -0.19
SYNGR3-204ENST00000564642 U3KQK5 164 aa13.89□□□□□ -0.19
SYNGR3-204ENST00000564642 A8MWP6 167 aa13.88□□□□□ -0.19
SYNGR3-204ENST00000564642 K7EIM0 57 aa13.88□□□□□ -0.19
SYNGR3-204ENST00000564642 SBSPONQ8IVN8 264 aa13.88□□□□□ -0.19
SYNGR3-204ENST00000564642 UXS1Q8NBZ7 420 aa13.88□□□□□ -0.19
SYNGR3-204ENST00000564642 ZNF114Q8NC26 417 aa13.88□□□□□ -0.19
SYNGR3-204ENST00000564642 CACNG8Q8WXS5 425 aa13.88□□□□□ -0.19
SYNGR3-204ENST00000564642 RBPMSQ93062 196 aaKnown RBP13.88□□□□□ -0.19
SYNGR3-204ENST00000564642 ZNF436Q9C0F3 470 aaPredicted RBP13.88□□□□□ -0.19
SYNGR3-204ENST00000564642 ENY2Q9NPA8 101 aa13.88□□□□□ -0.19
SYNGR3-204ENST00000564642 UFC1Q9Y3C8 167 aa13.88□□□□□ -0.19
SYNGR3-204ENST00000564642 TMEM213A2RRL7 107 aa13.87□□□□□ -0.19
SYNGR3-204ENST00000564642 ETV6P41212 452 aa13.87□□□□□ -0.19
SYNGR3-204ENST00000564642 SUB1P53999 127 aaKnown RBP eCLIP13.87□□□□□ -0.19
SYNGR3-204ENST00000564642 MFAP4P55083 255 aa13.87□□□□□ -0.19
SYNGR3-204ENST00000564642 GUCA2BQ16661 112 aa13.87□□□□□ -0.19
SYNGR3-204ENST00000564642 TM4SF20Q53R12 229 aa13.87□□□□□ -0.19
SYNGR3-204ENST00000564642 ZNF57Q68EA5 555 aaPredicted RBP13.87□□□□□ -0.19
SYNGR3-204ENST00000564642 UNQ9165/PRO28630Q6UXU0 137 aa13.87□□□□□ -0.19
SYNGR3-204ENST00000564642 SELENOHQ8IZQ5 122 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms