RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 LY86O95711 162 aa12.93□□□□□ -0.34
RNF40-206ENST00000564260 IFNA17P01571 189 aa12.93□□□□□ -0.34
RNF40-206ENST00000564260 HSPB1P04792 205 aaKnown RBP12.93□□□□□ -0.34
RNF40-206ENST00000564260 APELAP0DMC3 54 aa12.93□□□□□ -0.34
RNF40-206ENST00000564260 ZP3P21754 424 aa12.93□□□□□ -0.34
RNF40-206ENST00000564260 ATP5G2Q06055 141 aa12.93□□□□□ -0.34
RNF40-206ENST00000564260 SMCO1Q147U7 214 aa12.93□□□□□ -0.34
RNF40-206ENST00000564260 C4orf46Q504U0 113 aa12.93□□□□□ -0.34
RNF40-206ENST00000564260 ETV3LQ6ZN32 361 aa12.93□□□□□ -0.34
RNF40-206ENST00000564260 OR2C3Q8N628 320 aa12.93□□□□□ -0.34
RNF40-206ENST00000564260 LINC00482Q8N8I6 264 aa12.93□□□□□ -0.34
RNF40-206ENST00000564260 ENKURQ8TC29 256 aa12.93□□□□□ -0.34
RNF40-206ENST00000564260 GPR146Q96CH1 333 aa12.93□□□□□ -0.34
RNF40-206ENST00000564260 RCC1LQ96I51 464 aaKnown RBP12.93□□□□□ -0.34
RNF40-206ENST00000564260 RAX2Q96IS3 184 aa12.93□□□□□ -0.34
RNF40-206ENST00000564260 FANCD2OSQ96PS1 177 aa12.93□□□□□ -0.34
RNF40-206ENST00000564260 GNB4Q9HAV0 340 aa12.93□□□□□ -0.34
RNF40-206ENST00000564260 PALMDQ9NP74 551 aa12.93□□□□□ -0.34
RNF40-206ENST00000564260 CACNG5Q9UF02 275 aa12.93□□□□□ -0.34
RNF40-206ENST00000564260 MGAM2Q2M2H8 2515 aa12.93□□□□□ -0.34
RNF40-206ENST00000564260 TRBV7-1A0A0A6YYK4 115 aa12.92□□□□□ -0.34
RNF40-206ENST00000564260 A0A0G2JRQ6 117 aa12.92□□□□□ -0.34
RNF40-206ENST00000564260 DBX1A6NMT0 343 aa12.92□□□□□ -0.34
RNF40-206ENST00000564260 CORTO00230 105 aa12.92□□□□□ -0.34
RNF40-206ENST00000564260 MYOD1P15172 320 aa12.92□□□□□ -0.34
RNF40-206ENST00000564260 SUB1P53999 127 aaKnown RBP eCLIP12.92□□□□□ -0.34
RNF40-206ENST00000564260 ATP5IP56385 69 aaPredicted RBP12.92□□□□□ -0.34
RNF40-206ENST00000564260 C15orf32Q32M92 178 aa12.92□□□□□ -0.34
RNF40-206ENST00000564260 ANKRD55Q3KP44 614 aa12.92□□□□□ -0.34
RNF40-206ENST00000564260 LYZL2Q7Z4W2 148 aa12.92□□□□□ -0.34
RNF40-206ENST00000564260 OR11H1Q8NG94 326 aa12.92□□□□□ -0.34
RNF40-206ENST00000564260 OR1N2Q8NGR9 330 aa12.92□□□□□ -0.34
RNF40-206ENST00000564260 VN1R17PQ8TDU5 208 aa12.92□□□□□ -0.34
RNF40-206ENST00000564260 MITD1Q8WV92 249 aa12.92□□□□□ -0.34
RNF40-206ENST00000564260 DPF1Q92782 380 aa12.92□□□□□ -0.34
RNF40-206ENST00000564260 HINT2Q9BX68 163 aa12.92□□□□□ -0.34
RNF40-206ENST00000564260 ENY2Q9NPA8 101 aa12.92□□□□□ -0.34
RNF40-206ENST00000564260 NUDT15Q9NV35 164 aa12.92□□□□□ -0.34
RNF40-206ENST00000564260 LINC01619G3V211 115 aa12.91□□□□□ -0.34
RNF40-206ENST00000564260 CD33P20138 364 aa12.91□□□□□ -0.34
RNF40-206ENST00000564260 Q6ZRM9 215 aa12.91□□□□□ -0.34
RNF40-206ENST00000564260 NOXA1Q86UR1 476 aa12.91□□□□□ -0.34
RNF40-206ENST00000564260 OR10W1Q8NGF6 305 aa12.91□□□□□ -0.34
RNF40-206ENST00000564260 EEF1AKMT3Q96AZ1 226 aa12.91□□□□□ -0.34
RNF40-206ENST00000564260 PEF1Q9UBV8 284 aaKnown RBP12.91□□□□□ -0.34
RNF40-206ENST00000564260 HSPB7Q9UBY9 170 aa12.91□□□□□ -0.34
RNF40-206ENST00000564260 FBXL7Q9UJT9 491 aa12.91□□□□□ -0.34
RNF40-206ENST00000564260 FLVCR2Q9UPI3 526 aa12.91□□□□□ -0.34
RNF40-206ENST00000564260 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.9□□□□□ -0.34
RNF40-206ENST00000564260 IFNA21P01568 189 aa12.9□□□□□ -0.34
RNF40-206ENST00000564260 IL5P05113 134 aa12.9□□□□□ -0.34
RNF40-206ENST00000564260 H2AFB2P0C5Z0 115 aa12.9□□□□□ -0.34
RNF40-206ENST00000564260 ANXA7P20073 488 aaKnown RBP12.9□□□□□ -0.34
RNF40-206ENST00000564260 SNCAP37840 140 aa12.9□□□□□ -0.34
RNF40-206ENST00000564260 IFITM3Q01628 133 aa12.9□□□□□ -0.34
RNF40-206ENST00000564260 C18orf65Q6ZTR6 163 aa12.9□□□□□ -0.34
RNF40-206ENST00000564260 CASTOR1Q8WTX7 329 aa12.9□□□□□ -0.34
RNF40-206ENST00000564260 GAR1Q9NY12 217 aaKnown RBP12.9□□□□□ -0.34
RNF40-206ENST00000564260 PRAF2O60831 178 aa12.89□□□□□ -0.35
RNF40-206ENST00000564260 PITX3O75364 302 aa12.89□□□□□ -0.35
RNF40-206ENST00000564260 OR2J3O76001 311 aa12.89□□□□□ -0.35
RNF40-206ENST00000564260 HTR2BP41595 481 aa12.89□□□□□ -0.35
RNF40-206ENST00000564260 HOXA1P49639 335 aaPredicted RBP12.89□□□□□ -0.35
RNF40-206ENST00000564260 TNFRSF9Q07011 255 aa12.89□□□□□ -0.35
RNF40-206ENST00000564260 EXOSC2Q13868 293 aaKnown RBP12.89□□□□□ -0.35
RNF40-206ENST00000564260 IZUMO4Q1ZYL8 232 aa12.89□□□□□ -0.35
RNF40-206ENST00000564260 PVRIGQ6DKI7 326 aa12.89□□□□□ -0.35
RNF40-206ENST00000564260 HIST2H2BDQ6DRA6 164 aa12.89□□□□□ -0.35
RNF40-206ENST00000564260 PLET1Q6UQ28 207 aa12.89□□□□□ -0.35
RNF40-206ENST00000564260 ZMAT5Q9UDW3 170 aaKnown RBP12.89□□□□□ -0.35
RNF40-206ENST00000564260 WNK1Q9H4A3 2382 aa12.88□□□□□ -0.35
RNF40-206ENST00000564260 MED6O75586 246 aa12.88□□□□□ -0.35
RNF40-206ENST00000564260 REG1AP05451 166 aa12.88□□□□□ -0.35
RNF40-206ENST00000564260 FCGR2BP31994 310 aaPredicted RBP12.88□□□□□ -0.35
RNF40-206ENST00000564260 BSXQ3C1V8 233 aa12.88□□□□□ -0.35
RNF40-206ENST00000564260 ZNF431Q8TF32 576 aaPredicted RBP12.88□□□□□ -0.35
RNF40-206ENST00000564260 HIPK2Q9H2X6 1198 aa12.88□□□□□ -0.35
RNF40-206ENST00000564260 TRAV6A0A075B6T7 132 aa12.87□□□□□ -0.35
RNF40-206ENST00000564260 WIPF1O43516 503 aa12.87□□□□□ -0.35
RNF40-206ENST00000564260 IGHV3-11P01762 117 aa12.87□□□□□ -0.35
RNF40-206ENST00000564260 PRH1P02810 166 aa12.87□□□□□ -0.35
RNF40-206ENST00000564260 INSL3P51460 131 aa12.87□□□□□ -0.35
RNF40-206ENST00000564260 TATDN3Q17R31 274 aa12.87□□□□□ -0.35
RNF40-206ENST00000564260 DEFB136Q30KP8 78 aa12.87□□□□□ -0.35
RNF40-206ENST00000564260 SLC25A24Q6NUK1 477 aa12.87□□□□□ -0.35
RNF40-206ENST00000564260 NRARPQ7Z6K4 114 aa12.87□□□□□ -0.35
RNF40-206ENST00000564260 OR1S1Q8NH92 325 aa12.87□□□□□ -0.35
RNF40-206ENST00000564260 CIB3Q96Q77 187 aaPredicted RBP12.87□□□□□ -0.35
RNF40-206ENST00000564260 TXN2Q99757 166 aa12.87□□□□□ -0.35
RNF40-206ENST00000564260 MARVELD1Q9BSK0 173 aa12.87□□□□□ -0.35
RNF40-206ENST00000564260 GPN1Q9HCN4 374 aaPredicted RBP12.87□□□□□ -0.35
RNF40-206ENST00000564260 U3KQ87 197 aa12.87□□□□□ -0.35
RNF40-206ENST00000564260 IGHV4OR15-8A0A075B7B6 117 aa12.86□□□□□ -0.35
RNF40-206ENST00000564260 A0A087WW49 117 aa12.86□□□□□ -0.35
RNF40-206ENST00000564260 NDUFB8O95169 186 aa12.86□□□□□ -0.35
RNF40-206ENST00000564260 PTTG1O95997 202 aa12.86□□□□□ -0.35
RNF40-206ENST00000564260 GGNBP1Q5YKI7 109 aa12.86□□□□□ -0.35
RNF40-206ENST00000564260 SPSB3Q6PJ21 355 aa12.86□□□□□ -0.35
RNF40-206ENST00000564260 OR5B12Q96R08 314 aa12.86□□□□□ -0.35
RNF40-206ENST00000564260 HEYLQ9NQ87 328 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms