RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 DNAH9Q9NYC9 4486 aa23.32■■□□□ 1.32
CMTM4-204ENST00000563952 ANKRD20A5PA0PJZ0 165 aa23.32■■□□□ 1.32
CMTM4-204ENST00000563952 IZUMO1RA6ND01 250 aa23.32■■□□□ 1.32
CMTM4-204ENST00000563952 C2orf70A6NJV1 201 aa23.32■■□□□ 1.32
CMTM4-204ENST00000563952 ATG12O94817 140 aa23.32■■□□□ 1.32
CMTM4-204ENST00000563952 OR51S1Q8NGJ8 323 aa23.32■■□□□ 1.32
CMTM4-204ENST00000563952 PRRT1Q99946 306 aa23.32■■□□□ 1.32
CMTM4-204ENST00000563952 RTBDNQ9BSG5 229 aaPredicted RBP23.32■■□□□ 1.32
CMTM4-204ENST00000563952 FOLR2P14207 255 aa23.31■■□□□ 1.32
CMTM4-204ENST00000563952 PRCDQ00LT1 54 aa23.31■■□□□ 1.32
CMTM4-204ENST00000563952 PLET1Q6UQ28 207 aa23.31■■□□□ 1.32
CMTM4-204ENST00000563952 TEX13DA0A0J9YY54 714 aaPredicted RBP23.3■■□□□ 1.32
CMTM4-204ENST00000563952 FRMD6-AS1P0C7T7 363 aa23.3■■□□□ 1.32
CMTM4-204ENST00000563952 HSPE1P61604 102 aaKnown RBP23.3■■□□□ 1.32
CMTM4-204ENST00000563952 SURF2Q15527 256 aaPredicted RBP23.3■■□□□ 1.32
CMTM4-204ENST00000563952 SPINK9Q5DT21 86 aa23.3■■□□□ 1.32
CMTM4-204ENST00000563952 Q8N1Y9 231 aa23.3■■□□□ 1.32
CMTM4-204ENST00000563952 OR1L6Q8NGR2 347 aa23.3■■□□□ 1.32
CMTM4-204ENST00000563952 RBM38Q9H0Z9 239 aaKnown RBP23.3■■□□□ 1.32
CMTM4-204ENST00000563952 IGHV3-35A0A0C4DH35 117 aa23.29■■□□□ 1.32
CMTM4-204ENST00000563952 UCP1P25874 307 aa23.29■■□□□ 1.32
CMTM4-204ENST00000563952 CD300EQ496F6 205 aaPredicted RBP23.29■■□□□ 1.32
CMTM4-204ENST00000563952 OR2C3Q8N628 320 aa23.29■■□□□ 1.32
CMTM4-204ENST00000563952 OR2K2Q8NGT1 345 aa23.29■■□□□ 1.32
CMTM4-204ENST00000563952 RNASE11Q8TAA1 199 aaKnown RBP23.29■■□□□ 1.32
CMTM4-204ENST00000563952 CACNG8Q8WXS5 425 aa23.29■■□□□ 1.32
CMTM4-204ENST00000563952 THAP7Q9BT49 309 aaPredicted RBP23.29■■□□□ 1.32
CMTM4-204ENST00000563952 C5orf66Q9H5L9 145 aa23.29■■□□□ 1.32
CMTM4-204ENST00000563952 PLEKHA3Q9HB20 300 aa23.29■■□□□ 1.32
CMTM4-204ENST00000563952 MCUBQ9NWR8 336 aa23.29■■□□□ 1.32
CMTM4-204ENST00000563952 OR2T8A6NH00 312 aa23.28■■□□□ 1.32
CMTM4-204ENST00000563952 B3GALNT1O75752 331 aa23.28■■□□□ 1.32
CMTM4-204ENST00000563952 OR5AC1P0C628 307 aa23.28■■□□□ 1.32
CMTM4-204ENST00000563952 P0C879 139 aa23.28■■□□□ 1.32
CMTM4-204ENST00000563952 PYDC2Q56P42 97 aa23.28■■□□□ 1.32
CMTM4-204ENST00000563952 SGPP2Q8IWX5 399 aa23.28■■□□□ 1.32
CMTM4-204ENST00000563952 OR1P1Q8NH06 330 aa23.28■■□□□ 1.32
CMTM4-204ENST00000563952 SCARB1Q8WTV0 552 aa23.28■■□□□ 1.32
CMTM4-204ENST00000563952 NAA60Q9H7X0 242 aa23.28■■□□□ 1.32
CMTM4-204ENST00000563952 C21orf62Q9NYP8 219 aa23.28■■□□□ 1.32
CMTM4-204ENST00000563952 GPR132Q9UNW8 380 aa23.28■■□□□ 1.32
CMTM4-204ENST00000563952 A0A0B4J293 547 aa23.27■■□□□ 1.32
CMTM4-204ENST00000563952 TGOLN2O43493 480 aa23.27■■□□□ 1.32
CMTM4-204ENST00000563952 S100A5P33763 92 aa23.27■■□□□ 1.32
CMTM4-204ENST00000563952 DEFB114Q30KQ6 69 aa23.27■■□□□ 1.32
CMTM4-204ENST00000563952 GTSCR1Q86UQ5 136 aa23.27■■□□□ 1.32
CMTM4-204ENST00000563952 SBSPONQ8IVN8 264 aa23.27■■□□□ 1.32
CMTM4-204ENST00000563952 UBAC2Q8NBM4 344 aa23.27■■□□□ 1.32
CMTM4-204ENST00000563952 RRNAD1Q96FB5 475 aaKnown RBP23.27■■□□□ 1.32
CMTM4-204ENST00000563952 MISP3Q96FF7 219 aa23.27■■□□□ 1.32
CMTM4-204ENST00000563952 TMEM222Q9H0R3 208 aa23.27■■□□□ 1.32
CMTM4-204ENST00000563952 SCP2D1Q9UJQ7 156 aa23.27■■□□□ 1.32
CMTM4-204ENST00000563952 SELENOKQ9Y6D0 94 aa23.27■■□□□ 1.32
CMTM4-204ENST00000563952 U3KQK5 164 aa23.27■■□□□ 1.32
CMTM4-204ENST00000563952 K7EIM0 57 aa23.26■■□□□ 1.31
CMTM4-204ENST00000563952 IGHV4-30-4P0DP06 118 aa23.26■■□□□ 1.31
CMTM4-204ENST00000563952 CBLN1P23435 193 aa23.26■■□□□ 1.31
CMTM4-204ENST00000563952 UNQ9165/PRO28630Q6UXU0 137 aa23.26■■□□□ 1.31
CMTM4-204ENST00000563952 SLC2A8Q9NY64 477 aa23.26■■□□□ 1.31
CMTM4-204ENST00000563952 TMEM213A2RRL7 107 aa23.25■■□□□ 1.31
CMTM4-204ENST00000563952 A8MWP6 167 aa23.25■■□□□ 1.31
CMTM4-204ENST00000563952 ST8SIA3O43173 380 aa23.25■■□□□ 1.31
CMTM4-204ENST00000563952 IFNA17P01571 189 aa23.25■■□□□ 1.31
CMTM4-204ENST00000563952 ERHP84090 104 aaKnown RBP23.25■■□□□ 1.31
CMTM4-204ENST00000563952 Q56UQ5 140 aa23.25■■□□□ 1.31
CMTM4-204ENST00000563952 SLC35G3Q8N808 338 aa23.25■■□□□ 1.31
CMTM4-204ENST00000563952 PDCD10Q9BUL8 212 aa23.25■■□□□ 1.31
CMTM4-204ENST00000563952 A0A0G2JRQ6 117 aa23.24■■□□□ 1.31
CMTM4-204ENST00000563952 TM4SF20Q53R12 229 aa23.24■■□□□ 1.31
CMTM4-204ENST00000563952 GLYATL2Q8WU03 294 aa23.24■■□□□ 1.31
CMTM4-204ENST00000563952 BSCL2Q96G97 398 aaPredicted RBP23.24■■□□□ 1.31
CMTM4-204ENST00000563952 PALMDQ9NP74 551 aa23.24■■□□□ 1.31
CMTM4-204ENST00000563952 TECRQ9NZ01 308 aaKnown RBP23.24■■□□□ 1.31
CMTM4-204ENST00000563952 V9GYH0 126 aa23.24■■□□□ 1.31
CMTM4-204ENST00000563952 CRYM-AS1A6NIL9 109 aa23.23■■□□□ 1.31
CMTM4-204ENST00000563952 GUCA2BQ16661 112 aa23.23■■□□□ 1.31
CMTM4-204ENST00000563952 UXS1Q8NBZ7 420 aa23.23■■□□□ 1.31
CMTM4-204ENST00000563952 ZNF114Q8NC26 417 aa23.23■■□□□ 1.31
CMTM4-204ENST00000563952 ZNF701M0R085 212 aaPredicted RBP23.22■■□□□ 1.31
CMTM4-204ENST00000563952 CDS2O95674 445 aa23.22■■□□□ 1.31
CMTM4-204ENST00000563952 DHODHQ02127 395 aa23.22■■□□□ 1.31
CMTM4-204ENST00000563952 LHFPL5Q8TAF8 219 aa23.22■■□□□ 1.31
CMTM4-204ENST00000563952 ZNF436Q9C0F3 470 aaPredicted RBP23.22■■□□□ 1.31
CMTM4-204ENST00000563952 ETV6P41212 452 aa23.21■■□□□ 1.31
CMTM4-204ENST00000563952 SPSB3Q6PJ21 355 aa23.21■■□□□ 1.31
CMTM4-204ENST00000563952 RBPMSQ93062 196 aaKnown RBP23.21■■□□□ 1.31
CMTM4-204ENST00000563952 TRIM63Q969Q1 353 aa23.21■■□□□ 1.31
CMTM4-204ENST00000563952 PINX1Q96BK5 328 aaKnown RBP23.21■■□□□ 1.31
CMTM4-204ENST00000563952 SCGB3A2Q96PL1 93 aa23.21■■□□□ 1.31
CMTM4-204ENST00000563952 CHRDL1Q9BU40 450 aa23.21■■□□□ 1.31
CMTM4-204ENST00000563952 MLXQ9UH92 298 aa23.21■■□□□ 1.31
CMTM4-204ENST00000563952 UFC1Q9Y3C8 167 aa23.21■■□□□ 1.31
CMTM4-204ENST00000563952 ZNF785A8K8V0 405 aa23.2■■□□□ 1.3
CMTM4-204ENST00000563952 F8W735 103 aaPredicted RBP23.2■■□□□ 1.3
CMTM4-204ENST00000563952 SNCAP37840 140 aa23.2■■□□□ 1.3
CMTM4-204ENST00000563952 HOXA1P49639 335 aaPredicted RBP23.2■■□□□ 1.3
CMTM4-204ENST00000563952 CD81P60033 236 aa23.2■■□□□ 1.3
CMTM4-204ENST00000563952 ZNF79Q15937 498 aa23.2■■□□□ 1.3
CMTM4-204ENST00000563952 TMEM268Q5VZI3 342 aa23.2■■□□□ 1.3
CMTM4-204ENST00000563952 SELENOHQ8IZQ5 122 aaKnown RBP23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms