RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 TMEM140Q9NV12 185 aa12.01□□□□□ -0.49
RNF40-205ENST00000563909 TCRBP04435 133 aa12□□□□□ -0.49
RNF40-205ENST00000563909 MAS1LP35410 378 aa12□□□□□ -0.49
RNF40-205ENST00000563909 G6PCP35575 357 aa12□□□□□ -0.49
RNF40-205ENST00000563909 CRIP2P52943 208 aaPredicted RBP12□□□□□ -0.49
RNF40-205ENST00000563909 NDPQ00604 133 aa12□□□□□ -0.49
RNF40-205ENST00000563909 EWSR1Q01844 656 aaKnown RBP eCLIP12□□□□□ -0.49
RNF40-205ENST00000563909 TMEM267Q0VDI3 215 aaPredicted RBP12□□□□□ -0.49
RNF40-205ENST00000563909 PJVKQ0ZLH3 352 aa12□□□□□ -0.49
RNF40-205ENST00000563909 TNXAQ16473 311 aa12□□□□□ -0.49
RNF40-205ENST00000563909 IL34Q6ZMJ4 242 aa12□□□□□ -0.49
RNF40-205ENST00000563909 DEFB125Q8N687 156 aa12□□□□□ -0.49
RNF40-205ENST00000563909 ABHD5Q8WTS1 349 aa12□□□□□ -0.49
RNF40-205ENST00000563909 GLYATL2Q8WU03 294 aa12□□□□□ -0.49
RNF40-205ENST00000563909 ZNF430Q9H8G1 570 aaPredicted RBP12□□□□□ -0.49
RNF40-205ENST00000563909 PIGBOS1A0A0B4J2F0 54 aa11.99□□□□□ -0.49
RNF40-205ENST00000563909 UPK2O00526 184 aa11.99□□□□□ -0.49
RNF40-205ENST00000563909 CDS2O95674 445 aa11.99□□□□□ -0.49
RNF40-205ENST00000563909 IGKV1-39P01597 117 aa11.99□□□□□ -0.49
RNF40-205ENST00000563909 IGKV1D-39P04432 117 aa11.99□□□□□ -0.49
RNF40-205ENST00000563909 IL6RP08887 468 aaPredicted RBP11.99□□□□□ -0.49
RNF40-205ENST00000563909 FGF2P09038 288 aa11.99□□□□□ -0.49
RNF40-205ENST00000563909 RPL8P62917 257 aaKnown RBP11.99□□□□□ -0.49
RNF40-205ENST00000563909 TMEM187Q14656 261 aa11.99□□□□□ -0.49
RNF40-205ENST00000563909 MRGPRG-AS1Q2M3A8 158 aa11.99□□□□□ -0.49
RNF40-205ENST00000563909 H2BFWTQ7Z2G1 175 aa11.99□□□□□ -0.49
RNF40-205ENST00000563909 SEC22AQ96IW7 307 aa11.99□□□□□ -0.49
RNF40-205ENST00000563909 NEURL2Q9BR09 285 aa11.99□□□□□ -0.49
RNF40-205ENST00000563909 FLVCR2Q9UPI3 526 aa11.99□□□□□ -0.49
RNF40-205ENST00000563909 FAT2Q9NYQ8 4349 aa11.99□□□□□ -0.49
RNF40-205ENST00000563909 A0A0J9YWU9 116 aa11.98□□□□□ -0.49
RNF40-205ENST00000563909 SNAPC5O75971 98 aa11.98□□□□□ -0.49
RNF40-205ENST00000563909 SFT2D2O95562 160 aa11.98□□□□□ -0.49
RNF40-205ENST00000563909 VAMP1P23763 118 aa11.98□□□□□ -0.49
RNF40-205ENST00000563909 SUPT4H1P63272 117 aaKnown RBP11.98□□□□□ -0.49
RNF40-205ENST00000563909 SRPXP78539 464 aa11.98□□□□□ -0.49
RNF40-205ENST00000563909 OR9G4Q8NGQ1 327 aa11.98□□□□□ -0.49
RNF40-205ENST00000563909 GRPEL2Q8TAA5 225 aa11.98□□□□□ -0.49
RNF40-205ENST00000563909 ENKURQ8TC29 256 aa11.98□□□□□ -0.49
RNF40-205ENST00000563909 RBPMSQ93062 196 aaKnown RBP11.98□□□□□ -0.49
RNF40-205ENST00000563909 IL22RA2Q969J5 263 aa11.98□□□□□ -0.49
RNF40-205ENST00000563909 TMEM68Q96MH6 324 aa11.98□□□□□ -0.49
RNF40-205ENST00000563909 TMEM56Q96MV1 263 aa11.98□□□□□ -0.49
RNF40-205ENST00000563909 MS4A10Q96PG2 267 aa11.98□□□□□ -0.49
RNF40-205ENST00000563909 OVOL2Q9BRP0 275 aa11.98□□□□□ -0.49
RNF40-205ENST00000563909 C20orf85Q9H1P6 137 aa11.98□□□□□ -0.49
RNF40-205ENST00000563909 SRD5A3Q9H8P0 318 aa11.98□□□□□ -0.49
RNF40-205ENST00000563909 NUBP2Q9Y5Y2 271 aa11.98□□□□□ -0.49
RNF40-205ENST00000563909 TMEM56-RWDD3S4R434 201 aa11.98□□□□□ -0.49
RNF40-205ENST00000563909 EGR2P11161 476 aaPredicted RBP11.97□□□□□ -0.49
RNF40-205ENST00000563909 HLA-GP17693 338 aa11.97□□□□□ -0.49
RNF40-205ENST00000563909 ZP3P21754 424 aa11.97□□□□□ -0.49
RNF40-205ENST00000563909 AKR1C2P52895 323 aa11.97□□□□□ -0.49
RNF40-205ENST00000563909 TPPP2P59282 170 aa11.97□□□□□ -0.49
RNF40-205ENST00000563909 SSBP2P81877 361 aaPredicted RBP11.97□□□□□ -0.49
RNF40-205ENST00000563909 PRR20EP86478 221 aa11.97□□□□□ -0.49
RNF40-205ENST00000563909 PRR20CP86479 221 aa11.97□□□□□ -0.49
RNF40-205ENST00000563909 PRR20DP86480 221 aa11.97□□□□□ -0.49
RNF40-205ENST00000563909 PRR20BP86481 221 aa11.97□□□□□ -0.49
RNF40-205ENST00000563909 PRR20AP86496 221 aa11.97□□□□□ -0.49
RNF40-205ENST00000563909 AKIRIN2Q53H80 203 aa11.97□□□□□ -0.49
RNF40-205ENST00000563909 TMEM268Q5VZI3 342 aa11.97□□□□□ -0.49
RNF40-205ENST00000563909 SELENOHQ8IZQ5 122 aaKnown RBP11.97□□□□□ -0.49
RNF40-205ENST00000563909 LGI3Q8N145 548 aa11.97□□□□□ -0.49
RNF40-205ENST00000563909 RNASE11Q8TAA1 199 aaKnown RBP11.97□□□□□ -0.49
RNF40-205ENST00000563909 SRSF12Q8WXF0 261 aaKnown RBP11.97□□□□□ -0.49
RNF40-205ENST00000563909 RRNAD1Q96FB5 475 aaKnown RBP11.97□□□□□ -0.49
RNF40-205ENST00000563909 PHB2Q99623 299 aa11.97□□□□□ -0.49
RNF40-205ENST00000563909 FAM103A1Q9BTL3 118 aaKnown RBP11.97□□□□□ -0.49
RNF40-205ENST00000563909 WFDC10AQ9H1F0 79 aa11.97□□□□□ -0.49
RNF40-205ENST00000563909 RANGRFQ9HD47 186 aaPredicted RBP11.97□□□□□ -0.49
RNF40-205ENST00000563909 FKBP11Q9NYL4 201 aa11.97□□□□□ -0.49
RNF40-205ENST00000563909 PLA2G2EQ9NZK7 142 aa11.97□□□□□ -0.49
RNF40-205ENST00000563909 PRNDQ9UKY0 176 aa11.97□□□□□ -0.49
RNF40-205ENST00000563909 DNAH2Q9P225 4427 aa11.97□□□□□ -0.49
RNF40-205ENST00000563909 TRAV3A0A0B4J244 114 aa11.96□□□□□ -0.49
RNF40-205ENST00000563909 MSGN1A6NI15 193 aa11.96□□□□□ -0.49
RNF40-205ENST00000563909 IGKV1-5P01602 117 aa11.96□□□□□ -0.49
RNF40-205ENST00000563909 H2AFB2P0C5Z0 115 aa11.96□□□□□ -0.49
RNF40-205ENST00000563909 OR4E1P0C645 316 aa11.96□□□□□ -0.49
RNF40-205ENST00000563909 OR9G9P0C7N8 305 aa11.96□□□□□ -0.49
RNF40-205ENST00000563909 RPL27AP46776 148 aaKnown RBP11.96□□□□□ -0.49
RNF40-205ENST00000563909 PPP1R1AQ13522 171 aa11.96□□□□□ -0.49
RNF40-205ENST00000563909 KLF5Q13887 457 aaPredicted RBP11.96□□□□□ -0.49
RNF40-205ENST00000563909 UNQ5815/PRO19632Q6UWF5 114 aa11.96□□□□□ -0.49
RNF40-205ENST00000563909 FAM219AQ8IW50 185 aa11.96□□□□□ -0.49
RNF40-205ENST00000563909 DUSP18Q8NEJ0 188 aa11.96□□□□□ -0.49
RNF40-205ENST00000563909 LFNGQ8NES3 379 aa11.96□□□□□ -0.49
RNF40-205ENST00000563909 OR4A16Q8NH70 328 aa11.96□□□□□ -0.49
RNF40-205ENST00000563909 LHFPL5Q8TAF8 219 aa11.96□□□□□ -0.49
RNF40-205ENST00000563909 SPIN2AQ99865 258 aa11.96□□□□□ -0.49
RNF40-205ENST00000563909 SPIN2BQ9BPZ2 258 aa11.96□□□□□ -0.49
RNF40-205ENST00000563909 COMMD5Q9GZQ3 224 aa11.96□□□□□ -0.49
RNF40-205ENST00000563909 SLA2Q9H6Q3 261 aa11.96□□□□□ -0.49
RNF40-205ENST00000563909 NUDT15Q9NV35 164 aa11.96□□□□□ -0.49
RNF40-205ENST00000563909 DYNC1H1Q14204 4646 aaKnown RBP11.96□□□□□ -0.5
RNF40-205ENST00000563909 TRAV6A0A075B6T7 132 aa11.95□□□□□ -0.5
RNF40-205ENST00000563909 OR11H12B2RN74 326 aa11.95□□□□□ -0.5
RNF40-205ENST00000563909 HLA-AP01891 365 aaKnown RBP11.95□□□□□ -0.5
RNF40-205ENST00000563909 CD7P09564 240 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms