RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 ST3GAL4Q11206 333 aa7.04□□□□□ -1.28
HDGFL3-204ENST00000563790 ARHGAP5-AS1Q96IT6 56 aa7.04□□□□□ -1.28
HDGFL3-204ENST00000563790 C9orf16Q9BUW7 83 aa7.04□□□□□ -1.28
HDGFL3-204ENST00000563790 PECRQ9BY49 303 aa7.04□□□□□ -1.28
HDGFL3-204ENST00000563790 KRTAP4-2Q9BYR5 136 aa7.04□□□□□ -1.28
HDGFL3-204ENST00000563790 MGAT4AQ9UM21 535 aa7.04□□□□□ -1.28
HDGFL3-204ENST00000563790 YTHDF2Q9Y5A9 579 aaKnown RBP7.04□□□□□ -1.28
HDGFL3-204ENST00000563790 S4R3C0 116 aa7.04□□□□□ -1.28
HDGFL3-204ENST00000563790 IGKV3-7A0A075B6H7 116 aa7.03□□□□□ -1.28
HDGFL3-204ENST00000563790 IGHV3OR16-8A0A075B7F1 116 aa7.03□□□□□ -1.28
HDGFL3-204ENST00000563790 IGKV1D-8A0A087WSZ0 117 aa7.03□□□□□ -1.28
HDGFL3-204ENST00000563790 A0A0J9YXV3 536 aa7.03□□□□□ -1.28
HDGFL3-204ENST00000563790 EFCAB10A6NFE3 127 aa7.03□□□□□ -1.28
HDGFL3-204ENST00000563790 NPIPB5A8MRT5 1133 aa7.03□□□□□ -1.28
HDGFL3-204ENST00000563790 FABP7O15540 132 aa7.03□□□□□ -1.28
HDGFL3-204ENST00000563790 DIRAS3O95661 229 aa7.03□□□□□ -1.28
HDGFL3-204ENST00000563790 CRYZL1O95825 349 aa7.03□□□□□ -1.28
HDGFL3-204ENST00000563790 IGLV2-14P01704 120 aa7.03□□□□□ -1.28
HDGFL3-204ENST00000563790 CLEC3BP05452 202 aa7.03□□□□□ -1.28
HDGFL3-204ENST00000563790 UCHL1P09936 223 aa7.03□□□□□ -1.28
HDGFL3-204ENST00000563790 EIF4EBP1Q13541 118 aaPredicted RBP7.03□□□□□ -1.28
HDGFL3-204ENST00000563790 CDK10Q15131 360 aa7.03□□□□□ -1.28
HDGFL3-204ENST00000563790 ACSM3Q53FZ2 586 aa7.03□□□□□ -1.28
HDGFL3-204ENST00000563790 FAM90A2PQ658T7 463 aa7.03□□□□□ -1.28
HDGFL3-204ENST00000563790 ZFP1Q6P2D0 407 aa7.03□□□□□ -1.28
HDGFL3-204ENST00000563790 OR4A4PQ8NGN8 299 aa7.03□□□□□ -1.28
HDGFL3-204ENST00000563790 FKBP14Q9NWM8 211 aa7.03□□□□□ -1.28
HDGFL3-204ENST00000563790 ZNF257Q9Y2Q1 563 aa7.03□□□□□ -1.28
HDGFL3-204ENST00000563790 MACF1Q9UPN3 7388 aaKnown RBP7.02□□□□□ -1.29
HDGFL3-204ENST00000563790 IGLV11-55A0A075B6I3 123 aa7.02□□□□□ -1.29
HDGFL3-204ENST00000563790 IRGMA1A4Y4 181 aa7.02□□□□□ -1.29
HDGFL3-204ENST00000563790 MFSD2BA6NFX1 497 aa7.02□□□□□ -1.29
HDGFL3-204ENST00000563790 MPPED1O15442 326 aa7.02□□□□□ -1.29
HDGFL3-204ENST00000563790 FCGR3AP08637 254 aa7.02□□□□□ -1.29
HDGFL3-204ENST00000563790 ZNF735P0CB33 412 aa7.02□□□□□ -1.29
HDGFL3-204ENST00000563790 RRASP10301 218 aa7.02□□□□□ -1.29
HDGFL3-204ENST00000563790 AREGP15514 252 aa7.02□□□□□ -1.29
HDGFL3-204ENST00000563790 RPA2P15927 270 aa7.02□□□□□ -1.29
HDGFL3-204ENST00000563790 MAPK3P27361 379 aaPredicted RBP7.02□□□□□ -1.29
HDGFL3-204ENST00000563790 SERPINB10P48595 397 aa7.02□□□□□ -1.29
HDGFL3-204ENST00000563790 WNT4P56705 351 aa7.02□□□□□ -1.29
HDGFL3-204ENST00000563790 RPL30P62888 115 aaKnown RBP7.02□□□□□ -1.29
HDGFL3-204ENST00000563790 P2RY14Q15391 338 aa7.02□□□□□ -1.29
HDGFL3-204ENST00000563790 RTL8BQ17RB0 113 aa7.02□□□□□ -1.29
HDGFL3-204ENST00000563790 VMA21Q3ZAQ7 101 aa7.02□□□□□ -1.29
HDGFL3-204ENST00000563790 SSX9Q7RTT3 188 aa7.02□□□□□ -1.29
HDGFL3-204ENST00000563790 H1FOOQ8IZA3 346 aaPredicted RBP7.02□□□□□ -1.29
HDGFL3-204ENST00000563790 PUSL1Q8N0Z8 303 aaKnown RBP7.02□□□□□ -1.29
HDGFL3-204ENST00000563790 NANOGP1Q8N7R0 232 aa7.02□□□□□ -1.29
HDGFL3-204ENST00000563790 OR6M1Q8NGM8 313 aa7.02□□□□□ -1.29
HDGFL3-204ENST00000563790 OSR1Q8TAX0 266 aaPredicted RBP7.02□□□□□ -1.29
HDGFL3-204ENST00000563790 RBPMSQ93062 196 aaKnown RBP7.02□□□□□ -1.29
HDGFL3-204ENST00000563790 EEF1AKMT3Q96AZ1 226 aa7.02□□□□□ -1.29
HDGFL3-204ENST00000563790 SPIN2AQ99865 258 aa7.02□□□□□ -1.29
HDGFL3-204ENST00000563790 SPIN2BQ9BPZ2 258 aa7.02□□□□□ -1.29
HDGFL3-204ENST00000563790 XCL2Q9UBD3 114 aa7.02□□□□□ -1.29
HDGFL3-204ENST00000563790 PSORS1C1Q9UIG5 152 aa7.02□□□□□ -1.29
HDGFL3-204ENST00000563790 LSM2Q9Y333 95 aaKnown RBP7.02□□□□□ -1.29
HDGFL3-204ENST00000563790 K7EMT4 169 aa7.01□□□□□ -1.29
HDGFL3-204ENST00000563790 SLC17A2O00624 439 aa7.01□□□□□ -1.29
HDGFL3-204ENST00000563790 BET1O15155 118 aa7.01□□□□□ -1.29
HDGFL3-204ENST00000563790 CDK1P06493 297 aa7.01□□□□□ -1.29
HDGFL3-204ENST00000563790 GNAO1P09471 354 aa7.01□□□□□ -1.29
HDGFL3-204ENST00000563790 RASSF2P50749 326 aa7.01□□□□□ -1.29
HDGFL3-204ENST00000563790 PAFAH1B2P68402 229 aa7.01□□□□□ -1.29
HDGFL3-204ENST00000563790 TTC23Q5W5X9 447 aa7.01□□□□□ -1.29
HDGFL3-204ENST00000563790 TMEM91Q6ZNR0 172 aa7.01□□□□□ -1.29
HDGFL3-204ENST00000563790 MMD2Q8IY49 270 aa7.01□□□□□ -1.29
HDGFL3-204ENST00000563790 VKORC1L1Q8N0U8 176 aa7.01□□□□□ -1.29
HDGFL3-204ENST00000563790 PQLC1Q8N2U9 271 aa7.01□□□□□ -1.29
HDGFL3-204ENST00000563790 FAM24BQ8N5W8 94 aa7.01□□□□□ -1.29
HDGFL3-204ENST00000563790 ACOT12Q8WYK0 555 aa7.01□□□□□ -1.29
HDGFL3-204ENST00000563790 MAFIPQ8WZ33 124 aa7.01□□□□□ -1.29
HDGFL3-204ENST00000563790 CMSS1Q9BQ75 279 aaKnown RBP7.01□□□□□ -1.29
HDGFL3-204ENST00000563790 SMPXQ9UHP9 88 aa7.01□□□□□ -1.29
HDGFL3-204ENST00000563790 TRBV7-1A0A0A6YYK4 115 aa7□□□□□ -1.29
HDGFL3-204ENST00000563790 MFNGO00587 321 aa7□□□□□ -1.29
HDGFL3-204ENST00000563790 CIB2O75838 187 aa7□□□□□ -1.29
HDGFL3-204ENST00000563790 ATP5HO75947 161 aa7□□□□□ -1.29
HDGFL3-204ENST00000563790 H2AFB1P0C5Y9 115 aa7□□□□□ -1.29
HDGFL3-204ENST00000563790 H2AFB2P0C5Z0 115 aa7□□□□□ -1.29
HDGFL3-204ENST00000563790 FGF9P31371 208 aaPredicted RBP7□□□□□ -1.29
HDGFL3-204ENST00000563790 IRF3Q14653 427 aa7□□□□□ -1.29
HDGFL3-204ENST00000563790 RBM48Q5RL73 367 aaKnown RBP7□□□□□ -1.29
HDGFL3-204ENST00000563790 Q6ZS49 121 aa7□□□□□ -1.29
HDGFL3-204ENST00000563790 TMEM167AQ8TBQ9 72 aa7□□□□□ -1.29
HDGFL3-204ENST00000563790 ZNF502Q8TBZ5 544 aa7□□□□□ -1.29
HDGFL3-204ENST00000563790 ADTRPQ96IZ2 230 aa7□□□□□ -1.29
HDGFL3-204ENST00000563790 CMTM3Q96MX0 182 aa7□□□□□ -1.29
HDGFL3-204ENST00000563790 S100A14Q9HCY8 104 aa7□□□□□ -1.29
HDGFL3-204ENST00000563790 PLCXD1Q9NUJ7 323 aa7□□□□□ -1.29
HDGFL3-204ENST00000563790 MSRB1Q9NZV6 116 aa7□□□□□ -1.29
HDGFL3-204ENST00000563790 IGKV1D-13A0A0B4J2D9 117 aa6.99□□□□□ -1.29
HDGFL3-204ENST00000563790 KNCNA6PVL3 124 aa6.99□□□□□ -1.29
HDGFL3-204ENST00000563790 RAB27BO00194 218 aa6.99□□□□□ -1.29
HDGFL3-204ENST00000563790 CHEK1O14757 476 aa6.99□□□□□ -1.29
HDGFL3-204ENST00000563790 KBTBD11O94819 623 aa6.99□□□□□ -1.29
HDGFL3-204ENST00000563790 IGKV1-13P0DP09 117 aa6.99□□□□□ -1.29
HDGFL3-204ENST00000563790 CLDN12P56749 244 aa6.99□□□□□ -1.29
HDGFL3-204ENST00000563790 PLET1Q6UQ28 207 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms