RNA–Protein interactions for RNA: ENST00000562670.5

CLK3-209, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-209ENST00000562670 OPN1MW2P0DN77 364 aa11.04□□□□□ -0.64
CLK3-209ENST00000562670 OPN1MW3P0DN78 364 aa11.04□□□□□ -0.64
CLK3-209ENST00000562670 RNASE2P10153 161 aaKnown RBP11.04□□□□□ -0.64
CLK3-209ENST00000562670 SNCAP37840 140 aa11.04□□□□□ -0.64
CLK3-209ENST00000562670 CRIP2P52943 208 aaPredicted RBP11.04□□□□□ -0.64
CLK3-209ENST00000562670 SUB1P53999 127 aaKnown RBP eCLIP11.04□□□□□ -0.64
CLK3-209ENST00000562670 FXYD3Q14802 87 aa11.04□□□□□ -0.64
CLK3-209ENST00000562670 VWC2Q2TAL6 325 aa11.04□□□□□ -0.64
CLK3-209ENST00000562670 HAPLN4Q86UW8 402 aa11.04□□□□□ -0.64
CLK3-209ENST00000562670 OR10P1Q8NGE3 313 aa11.04□□□□□ -0.64
CLK3-209ENST00000562670 OR10W1Q8NGF6 305 aa11.04□□□□□ -0.64
CLK3-209ENST00000562670 OR5C1Q8NGR4 320 aa11.04□□□□□ -0.64
CLK3-209ENST00000562670 PHYHIPLQ96FC7 376 aa11.04□□□□□ -0.64
CLK3-209ENST00000562670 TMEM68Q96MH6 324 aa11.04□□□□□ -0.64
CLK3-209ENST00000562670 ZNF48Q96MX3 618 aaPredicted RBP11.04□□□□□ -0.64
CLK3-209ENST00000562670 ATP5SQ99766 215 aa11.04□□□□□ -0.64
CLK3-209ENST00000562670 ARV1Q9H2C2 271 aa11.04□□□□□ -0.64
CLK3-209ENST00000562670 ZNF580Q9UK33 172 aa11.04□□□□□ -0.64
CLK3-209ENST00000562670 VPREB3Q9UKI3 123 aa11.04□□□□□ -0.64
CLK3-209ENST00000562670 NAV3Q8IVL0 2385 aa11.04□□□□□ -0.64
CLK3-209ENST00000562670 BORCS7-ASMTA0A0B4J1R7 106 aa11.03□□□□□ -0.64
CLK3-209ENST00000562670 NPIPB5A8MRT5 1133 aa11.03□□□□□ -0.64
CLK3-209ENST00000562670 CNIH1O95406 144 aa11.03□□□□□ -0.64
CLK3-209ENST00000562670 AMY1AP04745 511 aa11.03□□□□□ -0.64
CLK3-209ENST00000562670 TPT1P13693 172 aaKnown RBP11.03□□□□□ -0.64
CLK3-209ENST00000562670 GNB1P62873 340 aa11.03□□□□□ -0.64
CLK3-209ENST00000562670 DLK1P80370 383 aa11.03□□□□□ -0.64
CLK3-209ENST00000562670 NDPQ00604 133 aa11.03□□□□□ -0.64
CLK3-209ENST00000562670 SLC38A11Q08AI6 406 aa11.03□□□□□ -0.64
CLK3-209ENST00000562670 ARL16Q0P5N6 197 aa11.03□□□□□ -0.64
CLK3-209ENST00000562670 OR1L6Q8NGR2 347 aa11.03□□□□□ -0.64
CLK3-209ENST00000562670 OR1P1Q8NH06 330 aa11.03□□□□□ -0.64
CLK3-209ENST00000562670 RNASEH2CQ8TDP1 164 aaKnown RBP11.03□□□□□ -0.64
CLK3-209ENST00000562670 BSCL2Q96G97 398 aaPredicted RBP11.03□□□□□ -0.64
CLK3-209ENST00000562670 ZNF471Q9BX82 626 aaPredicted RBP11.03□□□□□ -0.64
CLK3-209ENST00000562670 YAE1D1Q9NRH1 226 aa11.03□□□□□ -0.64
CLK3-209ENST00000562670 BAHCC1Q9P281 2608 aa11.03□□□□□ -0.64
CLK3-209ENST00000562670 CORTO00230 105 aa11.02□□□□□ -0.65
CLK3-209ENST00000562670 IGHV4-59P01825 116 aa11.02□□□□□ -0.65
CLK3-209ENST00000562670 CRYGCP07315 174 aa11.02□□□□□ -0.65
CLK3-209ENST00000562670 OR13C7P0DN81 318 aa11.02□□□□□ -0.65
CLK3-209ENST00000562670 CTRB1P17538 263 aa11.02□□□□□ -0.65
CLK3-209ENST00000562670 SRP14P37108 136 aaKnown RBP11.02□□□□□ -0.65
CLK3-209ENST00000562670 IFITM2Q01629 132 aa11.02□□□□□ -0.65
CLK3-209ENST00000562670 KLK9Q2XQG4 91 aa11.02□□□□□ -0.65
CLK3-209ENST00000562670 CTRB2Q6GPI1 263 aa11.02□□□□□ -0.65
CLK3-209ENST00000562670 TEX261Q6UWH6 196 aa11.02□□□□□ -0.65
CLK3-209ENST00000562670 ETV3LQ6ZN32 361 aa11.02□□□□□ -0.65
CLK3-209ENST00000562670 ZNF767PQ75MW2 155 aa11.02□□□□□ -0.65
CLK3-209ENST00000562670 TMEM219Q86XT9 240 aa11.02□□□□□ -0.65
CLK3-209ENST00000562670 LILRB2Q8N423 598 aa11.02□□□□□ -0.65
CLK3-209ENST00000562670 TMEM217Q8N7C4 229 aa11.02□□□□□ -0.65
CLK3-209ENST00000562670 SGMS2Q8NHU3 365 aa11.02□□□□□ -0.65
CLK3-209ENST00000562670 ST8SIA2Q92186 375 aa11.02□□□□□ -0.65
CLK3-209ENST00000562670 P2RX4Q99571 388 aa11.02□□□□□ -0.65
CLK3-209ENST00000562670 TMEM147Q9BVK8 224 aa11.02□□□□□ -0.65
CLK3-209ENST00000562670 WFDC1Q9HC57 220 aa11.02□□□□□ -0.65
CLK3-209ENST00000562670 KLK9Q9UKQ9 250 aa11.02□□□□□ -0.65
CLK3-209ENST00000562670 F11RQ9Y624 299 aaKnown RBP11.02□□□□□ -0.65
CLK3-209ENST00000562670 FLNBO75369 2602 aaKnown RBP11.02□□□□□ -0.65
CLK3-209ENST00000562670 AREGP15514 252 aa11.01□□□□□ -0.65
CLK3-209ENST00000562670 RPL7L1Q6DKI1 246 aaKnown RBP11.01□□□□□ -0.65
CLK3-209ENST00000562670 OR8G2PQ6IF36 304 aa11.01□□□□□ -0.65
CLK3-209ENST00000562670 BAP18Q8IXM2 172 aa11.01□□□□□ -0.65
CLK3-209ENST00000562670 CACNG8Q8WXS5 425 aa11.01□□□□□ -0.65
CLK3-209ENST00000562670 HSPB9Q9BQS6 159 aa11.01□□□□□ -0.65
CLK3-209ENST00000562670 GINS3Q9BRX5 216 aa11.01□□□□□ -0.65
CLK3-209ENST00000562670 CDC42EP3Q9UKI2 254 aa11.01□□□□□ -0.65
CLK3-209ENST00000562670 IFNA7P01567 189 aa11□□□□□ -0.65
CLK3-209ENST00000562670 IGHG2P01859 326 aa11□□□□□ -0.65
CLK3-209ENST00000562670 IFNA4P05014 189 aa11□□□□□ -0.65
CLK3-209ENST00000562670 IGF1P05019 195 aa11□□□□□ -0.65
CLK3-209ENST00000562670 EGR2P11161 476 aaPredicted RBP11□□□□□ -0.65
CLK3-209ENST00000562670 GPX4P36969 197 aaPredicted RBP11□□□□□ -0.65
CLK3-209ENST00000562670 EXOSC2Q13868 293 aaKnown RBP11□□□□□ -0.65
CLK3-209ENST00000562670 CLINT1Q14677 625 aa11□□□□□ -0.65
CLK3-209ENST00000562670 LY6EQ16553 131 aa11□□□□□ -0.65
CLK3-209ENST00000562670 EIF5AL1Q6IS14 154 aaKnown RBP11□□□□□ -0.65
CLK3-209ENST00000562670 CLEC9AQ6UXN8 241 aa11□□□□□ -0.65
CLK3-209ENST00000562670 TTC9CQ8N5M4 171 aa11□□□□□ -0.65
CLK3-209ENST00000562670 ABHD5Q8WTS1 349 aa11□□□□□ -0.65
CLK3-209ENST00000562670 C22orf15Q8WYQ4 148 aa11□□□□□ -0.65
CLK3-209ENST00000562670 SMIM3Q9BZL3 60 aa11□□□□□ -0.65
CLK3-209ENST00000562670 UQCC1Q9NVA1 299 aa11□□□□□ -0.65
CLK3-209ENST00000562670 ANK3Q12955 4377 aaKnown RBP11□□□□□ -0.65
CLK3-209ENST00000562670 TLN2Q9Y4G6 2542 aa11□□□□□ -0.65
CLK3-209ENST00000562670 CYB5BO43169 146 aa10.99□□□□□ -0.65
CLK3-209ENST00000562670 FBXO24O75426 580 aa10.99□□□□□ -0.65
CLK3-209ENST00000562670 LY6G6DO95868 133 aa10.99□□□□□ -0.65
CLK3-209ENST00000562670 IFNA5P01569 189 aa10.99□□□□□ -0.65
CLK3-209ENST00000562670 CD99P14209 185 aa10.99□□□□□ -0.65
CLK3-209ENST00000562670 MDKP21741 143 aaPredicted RBP10.99□□□□□ -0.65
CLK3-209ENST00000562670 AKIRIN2Q53H80 203 aa10.99□□□□□ -0.65
CLK3-209ENST00000562670 C19orf54Q5BKX5 351 aa10.99□□□□□ -0.65
CLK3-209ENST00000562670 ASPHD1Q5U4P2 390 aa10.99□□□□□ -0.65
CLK3-209ENST00000562670 ZNF680Q8NEM1 530 aa10.99□□□□□ -0.65
CLK3-209ENST00000562670 PAIP2BQ9ULR5 123 aaKnown RBP10.99□□□□□ -0.65
CLK3-209ENST00000562670 FBXO7Q9Y3I1 522 aa10.99□□□□□ -0.65
CLK3-209ENST00000562670 CLDN34H7C241 214 aa10.98□□□□□ -0.65
CLK3-209ENST00000562670 ATP6V0E1O15342 81 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms