RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 ZZEF1O43149 2961 aa15.47■□□□□ 0.07
RAB40C-206ENST00000561781 CHD8Q9HCK8 2581 aa15.47■□□□□ 0.07
RAB40C-206ENST00000561781 ANKRD30BLA7E2S9 258 aa15.47■□□□□ 0.07
RAB40C-206ENST00000561781 COX8AP10176 69 aa15.47■□□□□ 0.07
RAB40C-206ENST00000561781 CCNOP22674 350 aa15.47■□□□□ 0.07
RAB40C-206ENST00000561781 GNG4P50150 75 aa15.47■□□□□ 0.07
RAB40C-206ENST00000561781 TCL1AP56279 114 aa15.47■□□□□ 0.07
RAB40C-206ENST00000561781 C2orf91Q6ZV80 131 aa15.47■□□□□ 0.07
RAB40C-206ENST00000561781 LIN7CQ9NUP9 197 aaKnown RBP15.47■□□□□ 0.07
RAB40C-206ENST00000561781 KLRF1Q9NZS2 232 aa15.47■□□□□ 0.07
RAB40C-206ENST00000561781 CLCF1Q9UBD9 225 aa15.47■□□□□ 0.07
RAB40C-206ENST00000561781 CRYGSP22914 178 aa15.46■□□□□ 0.07
RAB40C-206ENST00000561781 FABP6P51161 128 aa15.46■□□□□ 0.07
RAB40C-206ENST00000561781 GCSAMLQ5JQS6 135 aa15.46■□□□□ 0.07
RAB40C-206ENST00000561781 C10orf128Q5T292 105 aa15.46■□□□□ 0.07
RAB40C-206ENST00000561781 TMEM251Q8N6I4 163 aa15.46■□□□□ 0.07
RAB40C-206ENST00000561781 PIGCQ92535 297 aa15.46■□□□□ 0.07
RAB40C-206ENST00000561781 YTHDF2Q9Y5A9 579 aaKnown RBP15.46■□□□□ 0.07
RAB40C-206ENST00000561781 SELENOKQ9Y6D0 94 aa15.46■□□□□ 0.07
RAB40C-206ENST00000561781 A0A1W2PPM0 123 aa15.46■□□□□ 0.07
RAB40C-206ENST00000561781 ISLRO14498 428 aa15.46■□□□□ 0.07
RAB40C-206ENST00000561781 CCL4P13236 92 aa15.46■□□□□ 0.07
RAB40C-206ENST00000561781 SLC35E4Q6ICL7 350 aa15.46■□□□□ 0.07
RAB40C-206ENST00000561781 RHBDD2Q6NTF9 364 aa15.46■□□□□ 0.07
RAB40C-206ENST00000561781 SHISA6Q6ZSJ9 500 aa15.46■□□□□ 0.07
RAB40C-206ENST00000561781 HS3ST6Q96QI5 342 aa15.46■□□□□ 0.07
RAB40C-206ENST00000561781 EXPH5Q8NEV8 1989 aa15.45■□□□□ 0.06
RAB40C-206ENST00000561781 CYC1P08574 325 aa15.45■□□□□ 0.06
RAB40C-206ENST00000561781 ZNF16P17020 682 aaPredicted RBP15.45■□□□□ 0.06
RAB40C-206ENST00000561781 RPS16P62249 146 aaKnown RBP15.45■□□□□ 0.06
RAB40C-206ENST00000561781 MEF2CQ06413 473 aaPredicted RBP15.45■□□□□ 0.06
RAB40C-206ENST00000561781 COLCA1Q6ZS62 124 aa15.45■□□□□ 0.06
RAB40C-206ENST00000561781 PLXDC1Q8IUK5 500 aa15.45■□□□□ 0.06
RAB40C-206ENST00000561781 Q8N7P7 452 aa15.45■□□□□ 0.06
RAB40C-206ENST00000561781 OCIAD1Q9NX40 245 aa15.45■□□□□ 0.06
RAB40C-206ENST00000561781 TNFSF11O14788 317 aa15.45■□□□□ 0.06
RAB40C-206ENST00000561781 ADH4P08319 380 aa15.45■□□□□ 0.06
RAB40C-206ENST00000561781 BCL3P20749 454 aa15.45■□□□□ 0.06
RAB40C-206ENST00000561781 ZNF585BQ52M93 769 aa15.45■□□□□ 0.06
RAB40C-206ENST00000561781 SLC25A53Q5H9E4 307 aa15.45■□□□□ 0.06
RAB40C-206ENST00000561781 FAM120AOSQ5T036 256 aa15.45■□□□□ 0.06
RAB40C-206ENST00000561781 WDR74Q6RFH5 385 aaPredicted RBP15.45■□□□□ 0.06
RAB40C-206ENST00000561781 C1orf122Q6ZSJ8 110 aa15.45■□□□□ 0.06
RAB40C-206ENST00000561781 SPSB4Q96A44 273 aa15.45■□□□□ 0.06
RAB40C-206ENST00000561781 LINC00470Q9BZP3 86 aa15.45■□□□□ 0.06
RAB40C-206ENST00000561781 RNASE7Q9H1E1 156 aaKnown RBP15.45■□□□□ 0.06
RAB40C-206ENST00000561781 TSPAN13O95857 204 aa15.44■□□□□ 0.06
RAB40C-206ENST00000561781 MT-CO3P00414 261 aa15.44■□□□□ 0.06
RAB40C-206ENST00000561781 UQCRFS1P47985 274 aa15.44■□□□□ 0.06
RAB40C-206ENST00000561781 FOXC1Q12948 553 aa15.44■□□□□ 0.06
RAB40C-206ENST00000561781 CENPWQ5EE01 88 aa15.44■□□□□ 0.06
RAB40C-206ENST00000561781 C20orf204Q6ZNR8 217 aa15.44■□□□□ 0.06
RAB40C-206ENST00000561781 FOXI2Q6ZQN5 318 aa15.44■□□□□ 0.06
RAB40C-206ENST00000561781 MBD6Q96DN6 1003 aa15.44■□□□□ 0.06
RAB40C-206ENST00000561781 ZNF837Q96EG3 531 aaPredicted RBP15.44■□□□□ 0.06
RAB40C-206ENST00000561781 PGPEP1Q9NXJ5 209 aa15.44■□□□□ 0.06
RAB40C-206ENST00000561781 IL36RNQ9UBH0 155 aa15.44■□□□□ 0.06
RAB40C-206ENST00000561781 CACNA1AO00555 2505 aa15.44■□□□□ 0.06
RAB40C-206ENST00000561781 KIAA1549Q9HCM3 1950 aa15.44■□□□□ 0.06
RAB40C-206ENST00000561781 DHHO43323 396 aa15.44■□□□□ 0.06
RAB40C-206ENST00000561781 IGLV2-14P01704 120 aa15.44■□□□□ 0.06
RAB40C-206ENST00000561781 FABP2P12104 132 aa15.44■□□□□ 0.06
RAB40C-206ENST00000561781 PPOXP50336 477 aa15.44■□□□□ 0.06
RAB40C-206ENST00000561781 EDDM3BP56851 147 aa15.44■□□□□ 0.06
RAB40C-206ENST00000561781 LTC4SQ16873 150 aa15.44■□□□□ 0.06
RAB40C-206ENST00000561781 WDR83OSQ9Y284 106 aa15.44■□□□□ 0.06
RAB40C-206ENST00000561781 AHCTF1Q8WYP5 2266 aa15.43■□□□□ 0.06
RAB40C-206ENST00000561781 DKK1O94907 266 aa15.43■□□□□ 0.06
RAB40C-206ENST00000561781 LEPROTL1O95214 131 aa15.43■□□□□ 0.06
RAB40C-206ENST00000561781 FXYD3Q14802 87 aa15.43■□□□□ 0.06
RAB40C-206ENST00000561781 KIR3DS1Q14943 382 aa15.43■□□□□ 0.06
RAB40C-206ENST00000561781 TIGITQ495A1 244 aa15.43■□□□□ 0.06
RAB40C-206ENST00000561781 BLNKQ8WV28 456 aa15.43■□□□□ 0.06
RAB40C-206ENST00000561781 TMEM54Q969K7 222 aa15.43■□□□□ 0.06
RAB40C-206ENST00000561781 HELTA6NFD8 242 aa15.43■□□□□ 0.06
RAB40C-206ENST00000561781 OR11H12B2RN74 326 aa15.43■□□□□ 0.06
RAB40C-206ENST00000561781 SYNGR3O43761 229 aa15.43■□□□□ 0.06
RAB40C-206ENST00000561781 MGST1P10620 155 aaKnown RBP15.43■□□□□ 0.06
RAB40C-206ENST00000561781 AREGP15514 252 aa15.43■□□□□ 0.06
RAB40C-206ENST00000561781 FGFRL1Q8N441 504 aa15.43■□□□□ 0.06
RAB40C-206ENST00000561781 OR11H1Q8NG94 326 aa15.43■□□□□ 0.06
RAB40C-206ENST00000561781 OR11H2Q8NH07 326 aa15.43■□□□□ 0.06
RAB40C-206ENST00000561781 MTCH1Q9NZJ7 389 aa15.43■□□□□ 0.06
RAB40C-206ENST00000561781 IGF2RP11717 2491 aa15.42■□□□□ 0.06
RAB40C-206ENST00000561781 MPDU1O75352 247 aa15.42■□□□□ 0.06
RAB40C-206ENST00000561781 OR2J3O76001 311 aa15.42■□□□□ 0.06
RAB40C-206ENST00000561781 RPL8P62917 257 aaKnown RBP15.42■□□□□ 0.06
RAB40C-206ENST00000561781 PRAMEF5Q5TYX0 476 aa15.42■□□□□ 0.06
RAB40C-206ENST00000561781 PRAMEF6Q5VXH4 476 aa15.42■□□□□ 0.06
RAB40C-206ENST00000561781 DOLPP1Q86YN1 238 aa15.42■□□□□ 0.06
RAB40C-206ENST00000561781 TPRX1Q8N7U7 411 aa15.42■□□□□ 0.06
RAB40C-206ENST00000561781 C5orf30Q96GV9 206 aa15.42■□□□□ 0.06
RAB40C-206ENST00000561781 ZNF257Q9Y2Q1 563 aa15.42■□□□□ 0.06
RAB40C-206ENST00000561781 hCG_38984A0A1B0GV85 526 aa15.42■□□□□ 0.06
RAB40C-206ENST00000561781 RRHO14718 337 aa15.42■□□□□ 0.06
RAB40C-206ENST00000561781 AGFG2O95081 481 aa15.42■□□□□ 0.06
RAB40C-206ENST00000561781 OPRK1P41145 380 aa15.42■□□□□ 0.06
RAB40C-206ENST00000561781 IBA57Q5T440 356 aaKnown RBP15.42■□□□□ 0.06
RAB40C-206ENST00000561781 IL1F10Q8WWZ1 152 aa15.42■□□□□ 0.06
RAB40C-206ENST00000561781 SLC25A17O43808 307 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms