RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 ZNF93P35789 620 aaPredicted RBP0.59□□□□□ -2.31
USP8-218ENST00000561330 GRK1Q15835 563 aa0.59□□□□□ -2.31
USP8-218ENST00000561330 CLVS2Q5SYC1 327 aa0.59□□□□□ -2.31
USP8-218ENST00000561330 LRRN1Q6UXK5 716 aa0.59□□□□□ -2.31
USP8-218ENST00000561330 OR4D11Q8NGI4 311 aa0.59□□□□□ -2.31
USP8-218ENST00000561330 PIGXQ8TBF5 258 aa0.59□□□□□ -2.31
USP8-218ENST00000561330 SLC50A1Q9BRV3 221 aa0.59□□□□□ -2.31
USP8-218ENST00000561330 CISHQ9NSE2 258 aa0.59□□□□□ -2.31
USP8-218ENST00000561330 ZFP30Q9Y2G7 519 aa0.59□□□□□ -2.31
USP8-218ENST00000561330 LAMB4A4D0S4 1761 aa0.59□□□□□ -2.32
USP8-218ENST00000561330 EVPLLA8MZ36 301 aa0.58□□□□□ -2.32
USP8-218ENST00000561330 CXCR6O00574 342 aa0.58□□□□□ -2.32
USP8-218ENST00000561330 HTR1AP08908 422 aa0.58□□□□□ -2.32
USP8-218ENST00000561330 FKBP2P26885 142 aaKnown RBP0.58□□□□□ -2.32
USP8-218ENST00000561330 IFITM2Q01629 132 aa0.58□□□□□ -2.32
USP8-218ENST00000561330 TMED1Q13445 227 aa0.58□□□□□ -2.32
USP8-218ENST00000561330 GUK1Q16774 197 aa0.58□□□□□ -2.32
USP8-218ENST00000561330 AADACL3Q5VUY0 350 aa0.58□□□□□ -2.32
USP8-218ENST00000561330 DEFB128Q7Z7B8 93 aa0.58□□□□□ -2.32
USP8-218ENST00000561330 OR2T4Q8NH00 348 aa0.58□□□□□ -2.32
USP8-218ENST00000561330 IGKV1D-42A0A075B6H8 117 aa0.57□□□□□ -2.32
USP8-218ENST00000561330 HYPMO75409 117 aa0.57□□□□□ -2.32
USP8-218ENST00000561330 ASAH2BP0C7U1 165 aa0.57□□□□□ -2.32
USP8-218ENST00000561330 NAA20P61599 178 aa0.57□□□□□ -2.32
USP8-218ENST00000561330 Q6ZQT0 140 aa0.57□□□□□ -2.32
USP8-218ENST00000561330 IQCF2Q8IXL9 164 aa0.57□□□□□ -2.32
USP8-218ENST00000561330 C1orf158Q8N1D5 194 aa0.57□□□□□ -2.32
USP8-218ENST00000561330 SCGB3A1Q96QR1 104 aa0.57□□□□□ -2.32
USP8-218ENST00000561330 DERL1Q9BUN8 251 aa0.57□□□□□ -2.32
USP8-218ENST00000561330 FGFR1OP2Q9NVK5 253 aa0.57□□□□□ -2.32
USP8-218ENST00000561330 RP1P56715 2156 aa0.57□□□□□ -2.32
USP8-218ENST00000561330 A0A0A6YYH2 397 aa0.56□□□□□ -2.32
USP8-218ENST00000561330 A0A1B0GV50 99 aa0.56□□□□□ -2.32
USP8-218ENST00000561330 A6NJ64 397 aa0.56□□□□□ -2.32
USP8-218ENST00000561330 INMT-MINDY4F8WBC2 141 aa0.56□□□□□ -2.32
USP8-218ENST00000561330 M0QX08 132 aa0.56□□□□□ -2.32
USP8-218ENST00000561330 M0QZ92 97 aa0.56□□□□□ -2.32
USP8-218ENST00000561330 ACOX3O15254 700 aa0.56□□□□□ -2.32
USP8-218ENST00000561330 OCM2P0CE71 109 aa0.56□□□□□ -2.32
USP8-218ENST00000561330 OGFRL1Q5TC84 451 aaPredicted RBP0.56□□□□□ -2.32
USP8-218ENST00000561330 PHF13Q86YI8 300 aaPredicted RBP0.56□□□□□ -2.32
USP8-218ENST00000561330 LINC00311Q8N616 119 aa0.56□□□□□ -2.32
USP8-218ENST00000561330 Q8N814 137 aa0.56□□□□□ -2.32
USP8-218ENST00000561330 PFN4Q8NHR9 129 aa0.56□□□□□ -2.32
USP8-218ENST00000561330 WDR61Q9GZS3 305 aaKnown RBP0.56□□□□□ -2.32
USP8-218ENST00000561330 MED12LQ86YW9 2145 aa0.56□□□□□ -2.32
USP8-218ENST00000561330 C2orf70A6NJV1 201 aa0.55□□□□□ -2.32
USP8-218ENST00000561330 GOLGA6L19H0YKK7 550 aa0.55□□□□□ -2.32
USP8-218ENST00000561330 OR2T1O43869 369 aa0.55□□□□□ -2.32
USP8-218ENST00000561330 OR1I1O60431 355 aa0.55□□□□□ -2.32
USP8-218ENST00000561330 CTSDP07339 412 aaPredicted RBP0.55□□□□□ -2.32
USP8-218ENST00000561330 SPI1P17947 270 aa0.55□□□□□ -2.32
USP8-218ENST00000561330 HIST1H2BOP23527 126 aa0.55□□□□□ -2.32
USP8-218ENST00000561330 RPS12P25398 132 aaKnown RBP0.55□□□□□ -2.32
USP8-218ENST00000561330 HIST1H2BBP33778 126 aa0.55□□□□□ -2.32
USP8-218ENST00000561330 HIST1H2BDP58876 126 aa0.55□□□□□ -2.32
USP8-218ENST00000561330 RAB4BP61018 213 aa0.55□□□□□ -2.32
USP8-218ENST00000561330 HIST1H2BCP62807 126 aa0.55□□□□□ -2.32
USP8-218ENST00000561330 KCNJ8Q15842 424 aa0.55□□□□□ -2.32
USP8-218ENST00000561330 HIST2H2BEQ16778 126 aa0.55□□□□□ -2.32
USP8-218ENST00000561330 SPANXN5Q5MJ07 72 aa0.55□□□□□ -2.32
USP8-218ENST00000561330 SPANXN3Q5MJ09 141 aa0.55□□□□□ -2.32
USP8-218ENST00000561330 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.55□□□□□ -2.32
USP8-218ENST00000561330 Q6ZS49 121 aa0.55□□□□□ -2.32
USP8-218ENST00000561330 OOSP2Q86WS3 158 aa0.55□□□□□ -2.32
USP8-218ENST00000561330 TMEM156Q8N614 296 aa0.55□□□□□ -2.32
USP8-218ENST00000561330 ZNF418Q8TF45 676 aaPredicted RBP0.55□□□□□ -2.32
USP8-218ENST00000561330 RAB8BQ92930 207 aa0.55□□□□□ -2.32
USP8-218ENST00000561330 HIST1H2BHQ93079 126 aa0.55□□□□□ -2.32
USP8-218ENST00000561330 HIST1H2BNQ99877 126 aa0.55□□□□□ -2.32
USP8-218ENST00000561330 HIST1H2BMQ99879 126 aa0.55□□□□□ -2.32
USP8-218ENST00000561330 GINS4Q9BRT9 223 aa0.55□□□□□ -2.32
USP8-218ENST00000561330 H0Y980 276 aa0.54□□□□□ -2.32
USP8-218ENST00000561330 PDE6HQ13956 83 aa0.54□□□□□ -2.32
USP8-218ENST00000561330 RPL22L1Q6P5R6 122 aaKnown RBP0.54□□□□□ -2.32
USP8-218ENST00000561330 DPPA3Q6W0C5 159 aa0.54□□□□□ -2.32
USP8-218ENST00000561330 BPIFA4PQ86YQ2 179 aa0.54□□□□□ -2.32
USP8-218ENST00000561330 OR4E2Q8NGC2 313 aa0.54□□□□□ -2.32
USP8-218ENST00000561330 DRC3Q9H069 523 aa0.54□□□□□ -2.32
USP8-218ENST00000561330 LRRN3E7EW58 273 aa0.53□□□□□ -2.32
USP8-218ENST00000561330 SLC16A4O15374 487 aa0.53□□□□□ -2.32
USP8-218ENST00000561330 CRYGAP11844 174 aa0.53□□□□□ -2.32
USP8-218ENST00000561330 CASQ1P31415 396 aa0.53□□□□□ -2.32
USP8-218ENST00000561330 GDF5OSQ5U4N7 250 aa0.53□□□□□ -2.32
USP8-218ENST00000561330 FAM151BQ6UXP7 276 aa0.53□□□□□ -2.32
USP8-218ENST00000561330 MRPL30Q8TCC3 161 aaKnown RBP0.53□□□□□ -2.32
USP8-218ENST00000561330 COL4A5P29400 1685 aa0.53□□□□□ -2.33
USP8-218ENST00000561330 A0A0D9SG52 128 aa0.52□□□□□ -2.33
USP8-218ENST00000561330 IGKV1-5P01602 117 aa0.52□□□□□ -2.33
USP8-218ENST00000561330 RAB5BP61020 215 aa0.52□□□□□ -2.33
USP8-218ENST00000561330 PDPK2PQ6A1A2 396 aa0.52□□□□□ -2.33
USP8-218ENST00000561330 KLK6Q92876 244 aa0.52□□□□□ -2.33
USP8-218ENST00000561330 ULBP3Q9BZM4 244 aa0.52□□□□□ -2.33
USP8-218ENST00000561330 OR51I1Q9H343 314 aa0.52□□□□□ -2.33
USP8-218ENST00000561330 EVC2Q86UK5 1308 aa0.52□□□□□ -2.33
USP8-218ENST00000561330 TRAV1-1A0A0B4J248 108 aa0.51□□□□□ -2.33
USP8-218ENST00000561330 LINC00854A0A1B0GVQ3 168 aa0.51□□□□□ -2.33
USP8-218ENST00000561330 CLDN25C9JDP6 229 aa0.51□□□□□ -2.33
USP8-218ENST00000561330 M0R2N4 97 aa0.51□□□□□ -2.33
USP8-218ENST00000561330 MIFP14174 115 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms