RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 NPBWR1P48145 328 aa8.37□□□□□ -1.07
TPM1-229ENST00000561242 ATP5IP56385 69 aaPredicted RBP8.37□□□□□ -1.07
TPM1-229ENST00000561242 NDPQ00604 133 aa8.37□□□□□ -1.07
TPM1-229ENST00000561242 DHRS2Q13268 280 aa8.37□□□□□ -1.07
TPM1-229ENST00000561242 EXOSC2Q13868 293 aaKnown RBP8.37□□□□□ -1.07
TPM1-229ENST00000561242 C15orf32Q32M92 178 aa8.37□□□□□ -1.07
TPM1-229ENST00000561242 C10orf99Q6UWK7 81 aa8.37□□□□□ -1.07
TPM1-229ENST00000561242 C12orf45Q8N5I9 185 aaPredicted RBP8.37□□□□□ -1.07
TPM1-229ENST00000561242 UBAC2Q8NBM4 344 aa8.37□□□□□ -1.07
TPM1-229ENST00000561242 DUSP18Q8NEJ0 188 aa8.37□□□□□ -1.07
TPM1-229ENST00000561242 ZNF431Q8TF32 576 aaPredicted RBP8.37□□□□□ -1.07
TPM1-229ENST00000561242 DCUN1D4Q92564 292 aa8.37□□□□□ -1.07
TPM1-229ENST00000561242 P2RX4Q99571 388 aa8.37□□□□□ -1.07
TPM1-229ENST00000561242 KLK15Q9H2R5 256 aa8.37□□□□□ -1.07
TPM1-229ENST00000561242 PEMTQ9UBM1 199 aa8.37□□□□□ -1.07
TPM1-229ENST00000561242 FBXO7Q9Y3I1 522 aa8.37□□□□□ -1.07
TPM1-229ENST00000561242 U3KQ87 197 aa8.37□□□□□ -1.07
TPM1-229ENST00000561242 DSCAML1Q8TD84 2053 aa8.37□□□□□ -1.07
TPM1-229ENST00000561242 NUPL2O15504 423 aaKnown RBP8.36□□□□□ -1.07
TPM1-229ENST00000561242 NXPH3O95157 252 aa8.36□□□□□ -1.07
TPM1-229ENST00000561242 BRI3O95415 125 aa8.36□□□□□ -1.07
TPM1-229ENST00000561242 IGKV1-5P01602 117 aa8.36□□□□□ -1.07
TPM1-229ENST00000561242 CRYGCP07315 174 aa8.36□□□□□ -1.07
TPM1-229ENST00000561242 SLC25A6P12236 298 aa8.36□□□□□ -1.07
TPM1-229ENST00000561242 AREGP15514 252 aa8.36□□□□□ -1.07
TPM1-229ENST00000561242 OPRK1P41145 380 aa8.36□□□□□ -1.07
TPM1-229ENST00000561242 MFAP4P55083 255 aa8.36□□□□□ -1.07
TPM1-229ENST00000561242 KRTAP10-3P60369 221 aa8.36□□□□□ -1.07
TPM1-229ENST00000561242 CYCSP99999 105 aaKnown RBP8.36□□□□□ -1.07
TPM1-229ENST00000561242 RGS21Q2M5E4 152 aa8.36□□□□□ -1.07
TPM1-229ENST00000561242 SPINK9Q5DT21 86 aa8.36□□□□□ -1.07
TPM1-229ENST00000561242 ACSM6Q6P461 480 aa8.36□□□□□ -1.07
TPM1-229ENST00000561242 RNF152Q8N8N0 203 aa8.36□□□□□ -1.07
TPM1-229ENST00000561242 LRTM2Q8N967 370 aa8.36□□□□□ -1.07
TPM1-229ENST00000561242 OR1P1Q8NH06 330 aa8.36□□□□□ -1.07
TPM1-229ENST00000561242 DTD1Q8TEA8 209 aa8.36□□□□□ -1.07
TPM1-229ENST00000561242 TMEM230Q96A57 120 aa8.36□□□□□ -1.07
TPM1-229ENST00000561242 RCC1LQ96I51 464 aaKnown RBP8.36□□□□□ -1.07
TPM1-229ENST00000561242 NARS2Q96I59 477 aaKnown RBP8.36□□□□□ -1.07
TPM1-229ENST00000561242 F11RQ9Y624 299 aaKnown RBP8.36□□□□□ -1.07
TPM1-229ENST00000561242 NSD1Q96L73 2696 aaPredicted RBP8.35□□□□□ -1.07
TPM1-229ENST00000561242 A0A0B4J293 547 aa8.35□□□□□ -1.07
TPM1-229ENST00000561242 ZNF320A2RRD8 509 aa8.35□□□□□ -1.07
TPM1-229ENST00000561242 TEX22C9J3V5 150 aa8.35□□□□□ -1.07
TPM1-229ENST00000561242 FAM90A26D6RGX4 464 aa8.35□□□□□ -1.07
TPM1-229ENST00000561242 GNG7O60262 68 aa8.35□□□□□ -1.07
TPM1-229ENST00000561242 GGCTO75223 188 aaKnown RBP8.35□□□□□ -1.07
TPM1-229ENST00000561242 IGKV1-39P01597 117 aa8.35□□□□□ -1.07
TPM1-229ENST00000561242 PRH1P02810 166 aa8.35□□□□□ -1.07
TPM1-229ENST00000561242 IGKV1D-39P04432 117 aa8.35□□□□□ -1.07
TPM1-229ENST00000561242 IL5P05113 134 aa8.35□□□□□ -1.07
TPM1-229ENST00000561242 FABP1P07148 127 aa8.35□□□□□ -1.07
TPM1-229ENST00000561242 CTRB1P17538 263 aa8.35□□□□□ -1.07
TPM1-229ENST00000561242 BMI1P35226 326 aa8.35□□□□□ -1.07
TPM1-229ENST00000561242 ARL3P36405 182 aa8.35□□□□□ -1.07
TPM1-229ENST00000561242 NKX2-1P43699 371 aaPredicted RBP8.35□□□□□ -1.07
TPM1-229ENST00000561242 CFHR3Q02985 330 aa8.35□□□□□ -1.07
TPM1-229ENST00000561242 RELQ04864 619 aaPredicted RBP8.35□□□□□ -1.07
TPM1-229ENST00000561242 IZUMO4Q1ZYL8 232 aa8.35□□□□□ -1.07
TPM1-229ENST00000561242 IAH1Q2TAA2 248 aaPredicted RBP8.35□□□□□ -1.07
TPM1-229ENST00000561242 GGNBP1Q5YKI7 109 aa8.35□□□□□ -1.07
TPM1-229ENST00000561242 CTRB2Q6GPI1 263 aa8.35□□□□□ -1.07
TPM1-229ENST00000561242 OR2C3Q8N628 320 aa8.35□□□□□ -1.07
TPM1-229ENST00000561242 OR10W1Q8NGF6 305 aa8.35□□□□□ -1.07
TPM1-229ENST00000561242 VN1R17PQ8TDU5 208 aa8.35□□□□□ -1.07
TPM1-229ENST00000561242 C21orf62Q9NYP8 219 aa8.35□□□□□ -1.07
TPM1-229ENST00000561242 PRR13Q9NZ81 148 aa8.35□□□□□ -1.07
TPM1-229ENST00000561242 PFDN2Q9UHV9 154 aa8.35□□□□□ -1.07
TPM1-229ENST00000561242 ZANQ9Y493 2812 aa8.34□□□□□ -1.07
TPM1-229ENST00000561242 OVOL1O14753 267 aa8.34□□□□□ -1.07
TPM1-229ENST00000561242 YIF1AO95070 293 aa8.34□□□□□ -1.07
TPM1-229ENST00000561242 PTTG1O95997 202 aa8.34□□□□□ -1.07
TPM1-229ENST00000561242 MYOD1P15172 320 aa8.34□□□□□ -1.07
TPM1-229ENST00000561242 S100A7P31151 101 aa8.34□□□□□ -1.07
TPM1-229ENST00000561242 BCAP31P51572 246 aa8.34□□□□□ -1.07
TPM1-229ENST00000561242 SUPT4H1P63272 117 aaKnown RBP8.34□□□□□ -1.07
TPM1-229ENST00000561242 TNFRSF9Q07011 255 aa8.34□□□□□ -1.07
TPM1-229ENST00000561242 ANKRD55Q3KP44 614 aa8.34□□□□□ -1.07
TPM1-229ENST00000561242 C9orf66Q5T8R8 295 aa8.34□□□□□ -1.07
TPM1-229ENST00000561242 SPSB3Q6PJ21 355 aa8.34□□□□□ -1.07
TPM1-229ENST00000561242 CLEC19AQ6UXS0 136 aa8.34□□□□□ -1.07
TPM1-229ENST00000561242 ETV3LQ6ZN32 361 aa8.34□□□□□ -1.07
TPM1-229ENST00000561242 NRARPQ7Z6K4 114 aa8.34□□□□□ -1.07
TPM1-229ENST00000561242 SLC24A4Q8NFF2 622 aa8.34□□□□□ -1.07
TPM1-229ENST00000561242 MITD1Q8WV92 249 aa8.34□□□□□ -1.07
TPM1-229ENST00000561242 TRAV30A0A087WSZ9 112 aa8.33□□□□□ -1.08
TPM1-229ENST00000561242 IGLC7A0M8Q6 106 aa8.33□□□□□ -1.08
TPM1-229ENST00000561242 SNRPGP15A8MWD9 76 aa8.33□□□□□ -1.08
TPM1-229ENST00000561242 SCAF4O95104 1147 aaKnown RBP8.33□□□□□ -1.08
TPM1-229ENST00000561242 TSPAN15O95858 294 aa8.33□□□□□ -1.08
TPM1-229ENST00000561242 CLEC3BP05452 202 aa8.33□□□□□ -1.08
TPM1-229ENST00000561242 SLC25A4P12235 298 aa8.33□□□□□ -1.08
TPM1-229ENST00000561242 NPY1RP25929 384 aa8.33□□□□□ -1.08
TPM1-229ENST00000561242 INSL3P51460 131 aa8.33□□□□□ -1.08
TPM1-229ENST00000561242 RUNX1Q01196 453 aa8.33□□□□□ -1.08
TPM1-229ENST00000561242 TCTEX1D4Q5JR98 221 aa8.33□□□□□ -1.08
TPM1-229ENST00000561242 ZNF343Q6P1L6 599 aa8.33□□□□□ -1.08
TPM1-229ENST00000561242 RNASEH2CQ8TDP1 164 aaKnown RBP8.33□□□□□ -1.08
TPM1-229ENST00000561242 DYNLRB2Q8TF09 96 aa8.33□□□□□ -1.08
TPM1-229ENST00000561242 SLC35E1Q96K37 410 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms