RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 TSC22D3Q99576 134 aa12.08□□□□□ -0.48
SNX1-213ENST00000561026 CHRDL1Q9BU40 450 aa12.08□□□□□ -0.48
SNX1-213ENST00000561026 FAM212BQ9NTI7 297 aaPredicted RBP12.08□□□□□ -0.48
SNX1-213ENST00000561026 COMMD3Q9UBI1 195 aa12.08□□□□□ -0.48
SNX1-213ENST00000561026 SMIM31A0A1B0GVY4 71 aa12.07□□□□□ -0.48
SNX1-213ENST00000561026 TNFAIP8O95379 198 aa12.07□□□□□ -0.48
SNX1-213ENST00000561026 APOA1P02647 267 aa12.07□□□□□ -0.48
SNX1-213ENST00000561026 S100GP29377 79 aa12.07□□□□□ -0.48
SNX1-213ENST00000561026 ADMP35318 185 aa12.07□□□□□ -0.48
SNX1-213ENST00000561026 CMTM3Q96MX0 182 aa12.07□□□□□ -0.48
SNX1-213ENST00000561026 C20orf24Q9BUV8 137 aa12.07□□□□□ -0.48
SNX1-213ENST00000561026 SCPEP1Q9HB40 452 aa12.07□□□□□ -0.48
SNX1-213ENST00000561026 HYDINQ4G0P3 5121 aa12.06□□□□□ -0.48
SNX1-213ENST00000561026 C15orf61A6NNL5 157 aa12.06□□□□□ -0.48
SNX1-213ENST00000561026 K7EMT4 169 aa12.06□□□□□ -0.48
SNX1-213ENST00000561026 LAMTOR1Q6IAA8 161 aa12.06□□□□□ -0.48
SNX1-213ENST00000561026 TBC1D26Q86UD7 250 aa12.06□□□□□ -0.48
SNX1-213ENST00000561026 SNX29P2Q8IUI4 249 aa12.06□□□□□ -0.48
SNX1-213ENST00000561026 UBAC2Q8NBM4 344 aa12.06□□□□□ -0.48
SNX1-213ENST00000561026 OR1P1Q8NH06 330 aa12.06□□□□□ -0.48
SNX1-213ENST00000561026 IGHV3OR16-8A0A075B7F1 116 aa12.05□□□□□ -0.48
SNX1-213ENST00000561026 CTSGP08311 255 aa12.05□□□□□ -0.48
SNX1-213ENST00000561026 UCP3P55916 312 aa12.05□□□□□ -0.48
SNX1-213ENST00000561026 NCS1P62166 190 aa12.05□□□□□ -0.48
SNX1-213ENST00000561026 Q56UQ5 140 aa12.05□□□□□ -0.48
SNX1-213ENST00000561026 SEC22AQ96IW7 307 aa12.05□□□□□ -0.48
SNX1-213ENST00000561026 FUNDC2Q9BWH2 189 aa12.05□□□□□ -0.48
SNX1-213ENST00000561026 UBQLN2Q9UHD9 624 aa12.05□□□□□ -0.48
SNX1-213ENST00000561026 C15orf62A8K5M9 175 aa12.05□□□□□ -0.48
SNX1-213ENST00000561026 ELK1P19419 428 aa12.05□□□□□ -0.48
SNX1-213ENST00000561026 RCVRNP35243 200 aa12.05□□□□□ -0.48
SNX1-213ENST00000561026 APOC4P55056 127 aa12.05□□□□□ -0.48
SNX1-213ENST00000561026 VBP1P61758 197 aa12.05□□□□□ -0.48
SNX1-213ENST00000561026 Q6ZWC4 215 aa12.05□□□□□ -0.48
SNX1-213ENST00000561026 H2BFWTQ7Z2G1 175 aa12.05□□□□□ -0.48
SNX1-213ENST00000561026 ZNF207O43670 478 aaKnown RBP12.04□□□□□ -0.48
SNX1-213ENST00000561026 IGKV1-39P01597 117 aa12.04□□□□□ -0.48
SNX1-213ENST00000561026 IGKV1D-39P04432 117 aa12.04□□□□□ -0.48
SNX1-213ENST00000561026 ODF3L2Q3SX64 289 aa12.04□□□□□ -0.48
SNX1-213ENST00000561026 WFDC3Q8IUB2 231 aa12.04□□□□□ -0.48
SNX1-213ENST00000561026 OR4A16Q8NH70 328 aa12.04□□□□□ -0.48
SNX1-213ENST00000561026 ZNF414Q96IQ9 312 aa12.04□□□□□ -0.48
SNX1-213ENST00000561026 SMPXQ9UHP9 88 aa12.04□□□□□ -0.48
SNX1-213ENST00000561026 TP53TG1Q9Y2A0 90 aa12.04□□□□□ -0.48
SNX1-213ENST00000561026 OR4C46A6NHA9 309 aa12.03□□□□□ -0.48
SNX1-213ENST00000561026 I3L2K1 104 aa12.03□□□□□ -0.48
SNX1-213ENST00000561026 UBE2CO00762 179 aa12.03□□□□□ -0.48
SNX1-213ENST00000561026 NUPL2O15504 423 aaKnown RBP12.03□□□□□ -0.48
SNX1-213ENST00000561026 HPGDSO60760 199 aa12.03□□□□□ -0.48
SNX1-213ENST00000561026 FCGR2BP31994 310 aaPredicted RBP12.03□□□□□ -0.48
SNX1-213ENST00000561026 MFAP4P55083 255 aa12.03□□□□□ -0.48
SNX1-213ENST00000561026 PRCDQ00LT1 54 aa12.03□□□□□ -0.48
SNX1-213ENST00000561026 RELQ04864 619 aaPredicted RBP12.03□□□□□ -0.48
SNX1-213ENST00000561026 ZNF114Q8NC26 417 aa12.03□□□□□ -0.48
SNX1-213ENST00000561026 MRGPRFQ96AM1 343 aa12.03□□□□□ -0.48
SNX1-213ENST00000561026 MISP3Q96FF7 219 aa12.03□□□□□ -0.48
SNX1-213ENST00000561026 TXN2Q99757 166 aa12.03□□□□□ -0.48
SNX1-213ENST00000561026 KIR2DL5BA0A0G2JN68 375 aa12.02□□□□□ -0.49
SNX1-213ENST00000561026 KIR2DL5BA0A0G2JPC4 375 aa12.02□□□□□ -0.49
SNX1-213ENST00000561026 SPRY2O43597 315 aa12.02□□□□□ -0.49
SNX1-213ENST00000561026 CTSDP07339 412 aaPredicted RBP12.02□□□□□ -0.49
SNX1-213ENST00000561026 BMI1P35226 326 aa12.02□□□□□ -0.49
SNX1-213ENST00000561026 RORCP51449 518 aa12.02□□□□□ -0.49
SNX1-213ENST00000561026 HSPE1P61604 102 aaKnown RBP12.02□□□□□ -0.49
SNX1-213ENST00000561026 KIR2DL5AQ8N109 375 aa12.02□□□□□ -0.49
SNX1-213ENST00000561026 KIR2DL5BQ8NHK3 375 aa12.02□□□□□ -0.49
SNX1-213ENST00000561026 OR10C1Q96KK4 312 aa12.02□□□□□ -0.49
SNX1-213ENST00000561026 RNF2Q99496 336 aa12.02□□□□□ -0.49
SNX1-213ENST00000561026 PLECQ15149 4684 aaKnown RBP12.01□□□□□ -0.49
SNX1-213ENST00000561026 M0QYG6 137 aa12.01□□□□□ -0.49
SNX1-213ENST00000561026 CHEK1O14757 476 aa12.01□□□□□ -0.49
SNX1-213ENST00000561026 YIF1AO95070 293 aa12.01□□□□□ -0.49
SNX1-213ENST00000561026 MT-CO2P00403 227 aa12.01□□□□□ -0.49
SNX1-213ENST00000561026 TNFRSF9Q07011 255 aa12.01□□□□□ -0.49
SNX1-213ENST00000561026 DEFB135Q30KP9 77 aa12.01□□□□□ -0.49
SNX1-213ENST00000561026 TMEM116Q8NCL8 245 aa12.01□□□□□ -0.49
SNX1-213ENST00000561026 RHPN1-AS1Q9BWJ2 59 aa12.01□□□□□ -0.49
SNX1-213ENST00000561026 NXF2Q9GZY0 626 aaKnown RBP12.01□□□□□ -0.49
SNX1-213ENST00000561026 BIRC6Q9NR09 4857 aa12.01□□□□□ -0.49
SNX1-213ENST00000561026 IGHV7-4-1A0A0J9YVY3 117 aa12□□□□□ -0.49
SNX1-213ENST00000561026 A0A0J9YWU9 116 aa12□□□□□ -0.49
SNX1-213ENST00000561026 IGHV3-48P01763 117 aa12□□□□□ -0.49
SNX1-213ENST00000561026 RND3P61587 244 aa12□□□□□ -0.49
SNX1-213ENST00000561026 ERHP84090 104 aaKnown RBP12□□□□□ -0.49
SNX1-213ENST00000561026 LYG2Q86SG7 212 aa12□□□□□ -0.49
SNX1-213ENST00000561026 STPG3Q8N7X2 389 aa12□□□□□ -0.49
SNX1-213ENST00000561026 RNF183Q96D59 192 aa12□□□□□ -0.49
SNX1-213ENST00000561026 KLK11Q9UBX7 282 aa12□□□□□ -0.49
SNX1-213ENST00000561026 TRAV14DV4A0A0A6YYC5 116 aa11.99□□□□□ -0.49
SNX1-213ENST00000561026 PGAM2P15259 253 aa11.99□□□□□ -0.49
SNX1-213ENST00000561026 RPL35AP18077 110 aaKnown RBP11.99□□□□□ -0.49
SNX1-213ENST00000561026 PI3P19957 117 aa11.99□□□□□ -0.49
SNX1-213ENST00000561026 EWSR1Q01844 656 aaKnown RBP eCLIP11.99□□□□□ -0.49
SNX1-213ENST00000561026 IZUMO4Q1ZYL8 232 aa11.99□□□□□ -0.49
SNX1-213ENST00000561026 MZT2AQ6P582 158 aa11.99□□□□□ -0.49
SNX1-213ENST00000561026 LHFPL1Q86WI0 220 aa11.99□□□□□ -0.49
SNX1-213ENST00000561026 PINX1Q96BK5 328 aaKnown RBP11.99□□□□□ -0.49
SNX1-213ENST00000561026 GALNT14Q96FL9 552 aa11.99□□□□□ -0.49
SNX1-213ENST00000561026 ZNF486Q96H40 463 aaPredicted RBP11.99□□□□□ -0.49
SNX1-213ENST00000561026 MAP6D1Q9H9H5 199 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms