RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 NUTF2P61970 127 aaKnown RBP2□□□□□ -2.09
SPG11-223ENST00000560858 GNB1P62873 340 aa2□□□□□ -2.09
SPG11-223ENST00000560858 HTD2P86397 168 aa2□□□□□ -2.09
SPG11-223ENST00000560858 PLGLB1Q02325 96 aa2□□□□□ -2.09
SPG11-223ENST00000560858 POU2AF1Q16633 256 aa2□□□□□ -2.09
SPG11-223ENST00000560858 C14orf177Q52M58 125 aa2□□□□□ -2.09
SPG11-223ENST00000560858 C1orf194Q5T5A4 169 aa2□□□□□ -2.09
SPG11-223ENST00000560858 C9orf135Q5VTT2 229 aa2□□□□□ -2.09
SPG11-223ENST00000560858 FBXW9Q5XUX1 488 aa2□□□□□ -2.09
SPG11-223ENST00000560858 OR8G2PQ6IF36 304 aa2□□□□□ -2.09
SPG11-223ENST00000560858 TEX38Q6PEX7 206 aa2□□□□□ -2.09
SPG11-223ENST00000560858 INO80CQ6PI98 192 aaPredicted RBP2□□□□□ -2.09
SPG11-223ENST00000560858 ZNF474Q6S9Z5 364 aaPredicted RBP2□□□□□ -2.09
SPG11-223ENST00000560858 FIP1L1Q6UN15 594 aaKnown RBP2□□□□□ -2.09
SPG11-223ENST00000560858 ACP7Q6ZNF0 438 aa2□□□□□ -2.09
SPG11-223ENST00000560858 TEX43Q6ZNM6 134 aa2□□□□□ -2.09
SPG11-223ENST00000560858 MCEMP1Q8IX19 187 aa2□□□□□ -2.09
SPG11-223ENST00000560858 UBALD2Q8IYN6 164 aa2□□□□□ -2.09
SPG11-223ENST00000560858 LYG1Q8N1E2 194 aa2□□□□□ -2.09
SPG11-223ENST00000560858 ZNF114Q8NC26 417 aa2□□□□□ -2.09
SPG11-223ENST00000560858 ZNF436-AS1Q8NC38 126 aaPredicted RBP2□□□□□ -2.09
SPG11-223ENST00000560858 NECAP1Q8NC96 275 aa2□□□□□ -2.09
SPG11-223ENST00000560858 OR10P1Q8NGE3 313 aa2□□□□□ -2.09
SPG11-223ENST00000560858 OR10G8Q8NGN5 311 aa2□□□□□ -2.09
SPG11-223ENST00000560858 OR4F5Q8NH21 305 aa2□□□□□ -2.09
SPG11-223ENST00000560858 OR52E5Q8NH55 327 aa2□□□□□ -2.09
SPG11-223ENST00000560858 OR1L1Q8NH94 360 aa2□□□□□ -2.09
SPG11-223ENST00000560858 GATAD1Q8WUU5 269 aa2□□□□□ -2.09
SPG11-223ENST00000560858 IL1F10Q8WWZ1 152 aa2□□□□□ -2.09
SPG11-223ENST00000560858 GALMQ96C23 342 aa2□□□□□ -2.09
SPG11-223ENST00000560858 LURAP1Q96LR2 239 aa2□□□□□ -2.09
SPG11-223ENST00000560858 YPEL2Q96QA6 119 aa2□□□□□ -2.09
SPG11-223ENST00000560858 OR4F4Q96R69 305 aa2□□□□□ -2.09
SPG11-223ENST00000560858 C20orf144Q9BQM9 153 aa2□□□□□ -2.09
SPG11-223ENST00000560858 PCGF1Q9BSM1 259 aa2□□□□□ -2.09
SPG11-223ENST00000560858 DERL1Q9BUN8 251 aa2□□□□□ -2.09
SPG11-223ENST00000560858 SFXN3Q9BWM7 321 aa2□□□□□ -2.09
SPG11-223ENST00000560858 GGTLC1Q9BX51 225 aa2□□□□□ -2.09
SPG11-223ENST00000560858 HES7Q9BYE0 225 aa2□□□□□ -2.09
SPG11-223ENST00000560858 PRO1933Q9H354 126 aa2□□□□□ -2.09
SPG11-223ENST00000560858 NCOR1P1Q9H4R4 102 aa2□□□□□ -2.09
SPG11-223ENST00000560858 ZDHHC11Q9H8X9 412 aa2□□□□□ -2.09
SPG11-223ENST00000560858 SCRT2Q9NQ03 307 aa2□□□□□ -2.09
SPG11-223ENST00000560858 TUBG2Q9NRH3 451 aa2□□□□□ -2.09
SPG11-223ENST00000560858 PPP1R14DQ9NXH3 145 aa2□□□□□ -2.09
SPG11-223ENST00000560858 SPRR3Q9UBC9 169 aa2□□□□□ -2.09
SPG11-223ENST00000560858 CLN8Q9UBY8 286 aa2□□□□□ -2.09
SPG11-223ENST00000560858 JPT1Q9UK76 154 aa2□□□□□ -2.09
SPG11-223ENST00000560858 TP53TG3Q9ULZ0 132 aa2□□□□□ -2.09
SPG11-223ENST00000560858 FUT9Q9Y231 359 aa2□□□□□ -2.09
SPG11-223ENST00000560858 FOXA2Q9Y261 457 aaPredicted RBP2□□□□□ -2.09
SPG11-223ENST00000560858 LSM4Q9Y4Z0 139 aaKnown RBP2□□□□□ -2.09
SPG11-223ENST00000560858 RBM7Q9Y580 266 aaKnown RBP2□□□□□ -2.09
SPG11-223ENST00000560858 PXMP4Q9Y6I8 212 aa2□□□□□ -2.09
SPG11-223ENST00000560858 HEATR1Q9H583 2144 aaKnown RBP2□□□□□ -2.09
SPG11-223ENST00000560858 CUL9Q8IWT3 2517 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 PCNX2A6NKB5 2137 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 SPTBN5Q9NRC6 3674 aaKnown RBP1.99□□□□□ -2.09
SPG11-223ENST00000560858 SAA2-SAA4A0A096LPE2 208 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 TRGV10A0A0A0MS01 117 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 TRAV38-1A0A0B4J264 116 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 A0A1B0GUS0 222 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 A0A1W2PNU3 283 aaPredicted RBP1.99□□□□□ -2.09
SPG11-223ENST00000560858 MBD3L4A6NDZ8 208 aaPredicted RBP1.99□□□□□ -2.09
SPG11-223ENST00000560858 MBD3L3A6NE82 208 aaPredicted RBP1.99□□□□□ -2.09
SPG11-223ENST00000560858 C15orf61A6NNL5 157 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 SRRM5B3KS81 715 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 K7EN84 100 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 WNT9BO14905 357 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 HMGB3O15347 200 aaKnown RBP1.99□□□□□ -2.09
SPG11-223ENST00000560858 SPINT2O43291 252 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 MMP23AO75900 390 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 CXorf1O96002 111 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 HPRT1P00492 218 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 KRASP01116 189 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 IGLV1-44P01699 117 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 IGHG3P01860 377 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 MT-ND6P03923 174 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 OR4A8P0C604 315 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 OR5G3P0C626 314 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 ARL14EPLP0DKL9 152 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 DEFA4P12838 97 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 BTF3P20290 206 aaKnown RBP1.99□□□□□ -2.09
SPG11-223ENST00000560858 IGHV1-2P23083 117 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 GCHFRP30047 84 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 SSTR5P35346 364 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 TIMP3P35625 211 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 CHRNA7P36544 502 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 MPV17P39210 176 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 GABRA2P47869 451 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 RPL29P47914 159 aaKnown RBP1.99□□□□□ -2.09
SPG11-223ENST00000560858 TNFSF10P50591 281 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 TDGF1P3P51864 188 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 RPP30P78346 268 aaKnown RBP1.99□□□□□ -2.09
SPG11-223ENST00000560858 PMP22Q01453 160 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 TGFBR3Q03167 851 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 SRYQ05066 204 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 ZNF816Q0VGE8 651 aaPredicted RBP1.99□□□□□ -2.09
SPG11-223ENST00000560858 PSG7Q13046 419 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 C3AR1Q16581 482 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms