RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 IGLC7A0M8Q6 106 aa10.32□□□□□ -0.76
SNX1-211ENST00000560829 NBR2O15453 112 aa10.32□□□□□ -0.76
SNX1-211ENST00000560829 APOC3P02656 99 aa10.32□□□□□ -0.76
SNX1-211ENST00000560829 M6PRP20645 277 aa10.32□□□□□ -0.76
SNX1-211ENST00000560829 GPX4P36969 197 aaPredicted RBP10.32□□□□□ -0.76
SNX1-211ENST00000560829 SUB1P53999 127 aaKnown RBP eCLIP10.32□□□□□ -0.76
SNX1-211ENST00000560829 SSBP2P81877 361 aaPredicted RBP10.32□□□□□ -0.76
SNX1-211ENST00000560829 CD69Q07108 199 aa10.32□□□□□ -0.76
SNX1-211ENST00000560829 PMS2P11Q13670 270 aa10.32□□□□□ -0.76
SNX1-211ENST00000560829 SSX2Q16385 188 aa10.32□□□□□ -0.76
SNX1-211ENST00000560829 TNXAQ16473 311 aa10.32□□□□□ -0.76
SNX1-211ENST00000560829 FFAR4Q5NUL3 377 aa10.32□□□□□ -0.76
SNX1-211ENST00000560829 SSX7Q7RTT5 188 aa10.32□□□□□ -0.76
SNX1-211ENST00000560829 TMEM144Q7Z5S9 345 aa10.32□□□□□ -0.76
SNX1-211ENST00000560829 Q8N6K4 173 aa10.32□□□□□ -0.76
SNX1-211ENST00000560829 PERPQ96FX8 193 aa10.32□□□□□ -0.76
SNX1-211ENST00000560829 AJUBAQ96IF1 538 aa10.32□□□□□ -0.76
SNX1-211ENST00000560829 EAF1Q96JC9 268 aaPredicted RBP10.32□□□□□ -0.76
SNX1-211ENST00000560829 P2RX4Q99571 388 aa10.32□□□□□ -0.76
SNX1-211ENST00000560829 SRSF8Q9BRL6 282 aaKnown RBP10.32□□□□□ -0.76
SNX1-211ENST00000560829 SPTAN1Q13813 2472 aaKnown RBP10.32□□□□□ -0.76
SNX1-211ENST00000560829 OR13C7P0DN81 318 aa10.32□□□□□ -0.76
SNX1-211ENST00000560829 HNF4GQ14541 408 aa10.32□□□□□ -0.76
SNX1-211ENST00000560829 MMDQ15546 238 aa10.32□□□□□ -0.76
SNX1-211ENST00000560829 ACOT6Q3I5F7 207 aaPredicted RBP10.32□□□□□ -0.76
SNX1-211ENST00000560829 OR10G4Q8NGN3 311 aa10.32□□□□□ -0.76
SNX1-211ENST00000560829 OR10G9Q8NGN4 311 aa10.32□□□□□ -0.76
SNX1-211ENST00000560829 OR10G7Q8NGN6 311 aa10.32□□□□□ -0.76
SNX1-211ENST00000560829 OR2T10Q8NGZ9 312 aa10.32□□□□□ -0.76
SNX1-211ENST00000560829 NRGNQ92686 78 aa10.32□□□□□ -0.76
SNX1-211ENST00000560829 EIF5A2Q9GZV4 153 aaKnown RBP10.32□□□□□ -0.76
SNX1-211ENST00000560829 TET2Q6N021 2002 aaPredicted RBP10.31□□□□□ -0.76
SNX1-211ENST00000560829 CTXND1A0A1B0GTU2 59 aa10.31□□□□□ -0.76
SNX1-211ENST00000560829 A0A1B0GV50 99 aa10.31□□□□□ -0.76
SNX1-211ENST00000560829 RBFOX3A6NFN3 312 aa10.31□□□□□ -0.76
SNX1-211ENST00000560829 SEC14L6B5MCN3 397 aa10.31□□□□□ -0.76
SNX1-211ENST00000560829 TEX22C9J3V5 150 aa10.31□□□□□ -0.76
SNX1-211ENST00000560829 F8W036 122 aa10.31□□□□□ -0.76
SNX1-211ENST00000560829 SNRNP70P08621 437 aaKnown RBP10.31□□□□□ -0.76
SNX1-211ENST00000560829 SFTA3P0C7M3 94 aa10.31□□□□□ -0.76
SNX1-211ENST00000560829 RAB31Q13636 194 aa10.31□□□□□ -0.76
SNX1-211ENST00000560829 ZNF787Q6DD87 383 aa10.31□□□□□ -0.76
SNX1-211ENST00000560829 MAP1LC3B2A6NCE7 125 aa10.3□□□□□ -0.76
SNX1-211ENST00000560829 CYB5BO43169 146 aa10.3□□□□□ -0.76
SNX1-211ENST00000560829 RPL29P47914 159 aaKnown RBP10.3□□□□□ -0.76
SNX1-211ENST00000560829 GAMTQ14353 236 aa10.3□□□□□ -0.76
SNX1-211ENST00000560829 LCN15Q6UWW0 184 aa10.3□□□□□ -0.76
SNX1-211ENST00000560829 C17orf50Q8WW18 174 aa10.3□□□□□ -0.76
SNX1-211ENST00000560829 ACTR3CQ9C0K3 210 aaPredicted RBP10.3□□□□□ -0.76
SNX1-211ENST00000560829 MAP1LC3BQ9GZQ8 125 aa10.3□□□□□ -0.76
SNX1-211ENST00000560829 SLC39A9Q9NUM3 307 aa10.3□□□□□ -0.76
SNX1-211ENST00000560829 PXMP4Q9Y6I8 212 aa10.3□□□□□ -0.76
SNX1-211ENST00000560829 FCN1O00602 326 aa10.3□□□□□ -0.76
SNX1-211ENST00000560829 YIF1AO95070 293 aa10.3□□□□□ -0.76
SNX1-211ENST00000560829 SLC25A16P16260 332 aa10.3□□□□□ -0.76
SNX1-211ENST00000560829 PRR20EP86478 221 aa10.3□□□□□ -0.76
SNX1-211ENST00000560829 PRR20CP86479 221 aa10.3□□□□□ -0.76
SNX1-211ENST00000560829 PRR20DP86480 221 aa10.3□□□□□ -0.76
SNX1-211ENST00000560829 PRR20BP86481 221 aa10.3□□□□□ -0.76
SNX1-211ENST00000560829 PRR20AP86496 221 aa10.3□□□□□ -0.76
SNX1-211ENST00000560829 ZNF506Q5JVG8 444 aa10.3□□□□□ -0.76
SNX1-211ENST00000560829 SLC16A13Q7RTY0 426 aa10.3□□□□□ -0.76
SNX1-211ENST00000560829 SVBPQ8N300 66 aa10.3□□□□□ -0.76
SNX1-211ENST00000560829 SRSF12Q8WXF0 261 aaKnown RBP10.3□□□□□ -0.76
SNX1-211ENST00000560829 CENPVL3A0A0U1RRI6 287 aa10.29□□□□□ -0.76
SNX1-211ENST00000560829 NPFFO15130 113 aa10.29□□□□□ -0.76
SNX1-211ENST00000560829 SCO1O75880 301 aa10.29□□□□□ -0.76
SNX1-211ENST00000560829 PAX6P26367 422 aa10.29□□□□□ -0.76
SNX1-211ENST00000560829 SAA4P35542 130 aa10.29□□□□□ -0.76
SNX1-211ENST00000560829 PLGLAQ15195 96 aa10.29□□□□□ -0.76
SNX1-211ENST00000560829 C5orf64Q2M2E5 130 aa10.29□□□□□ -0.76
SNX1-211ENST00000560829 TMEM249Q2WGJ8 235 aa10.29□□□□□ -0.76
SNX1-211ENST00000560829 KHDC3LQ587J8 217 aa10.29□□□□□ -0.76
SNX1-211ENST00000560829 OR1P1Q8NH06 330 aa10.29□□□□□ -0.76
SNX1-211ENST00000560829 RAB24Q969Q5 203 aa10.29□□□□□ -0.76
SNX1-211ENST00000560829 SLC35B3Q9H1N7 401 aa10.29□□□□□ -0.76
SNX1-211ENST00000560829 IGKV1OR2-108A0A075B7D4 117 aa10.28□□□□□ -0.76
SNX1-211ENST00000560829 HSPB1P04792 205 aaKnown RBP10.28□□□□□ -0.76
SNX1-211ENST00000560829 AREGP15514 252 aa10.28□□□□□ -0.76
SNX1-211ENST00000560829 CD24P25063 80 aa10.28□□□□□ -0.76
SNX1-211ENST00000560829 CDC34P49427 236 aaPredicted RBP10.28□□□□□ -0.76
SNX1-211ENST00000560829 PPT1P50897 306 aa10.28□□□□□ -0.76
SNX1-211ENST00000560829 B2MP61769 119 aa10.28□□□□□ -0.76
SNX1-211ENST00000560829 GNB1P62873 340 aa10.28□□□□□ -0.76
SNX1-211ENST00000560829 DEFA5Q01523 94 aa10.28□□□□□ -0.76
SNX1-211ENST00000560829 HES1Q14469 280 aa10.28□□□□□ -0.76
SNX1-211ENST00000560829 ICAM4Q14773 271 aa10.28□□□□□ -0.76
SNX1-211ENST00000560829 CLEC12BQ2HXU8 276 aa10.28□□□□□ -0.76
SNX1-211ENST00000560829 FBLN7Q53RD9 439 aa10.28□□□□□ -0.76
SNX1-211ENST00000560829 MIC13Q5XKP0 118 aa10.28□□□□□ -0.76
SNX1-211ENST00000560829 PIP4P2Q8N4L2 257 aa10.28□□□□□ -0.76
SNX1-211ENST00000560829 SLC35E1Q96K37 410 aa10.28□□□□□ -0.76
SNX1-211ENST00000560829 RARRES2Q99969 163 aa10.28□□□□□ -0.76
SNX1-211ENST00000560829 FNDC4Q9H6D8 234 aaPredicted RBP10.28□□□□□ -0.76
SNX1-211ENST00000560829 SLC25A22Q9H936 323 aa10.28□□□□□ -0.76
SNX1-211ENST00000560829 SLC45A2Q9UMX9 530 aa10.28□□□□□ -0.76
SNX1-211ENST00000560829 VPS13CQ709C8 3753 aa10.28□□□□□ -0.76
SNX1-211ENST00000560829 LOC102723971A0A1B0GUV8 181 aa10.27□□□□□ -0.76
SNX1-211ENST00000560829 CORTO00230 105 aa10.27□□□□□ -0.76
SNX1-211ENST00000560829 CRYGCP07315 174 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms