RNA–Protein interactions for RNA: ENST00000560754.1

RNF31-223, Transcript of ring finger protein 31, human

TSL 3

Gene RNF31, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-223	ENST00000560754	MAP6D1	Q9H9H5	199 aa		10.08	□□□□□ -0.8
RNF31-223	ENST00000560754	FAM212B	Q9NTI7	297 aa	Predicted RBP	10.08	□□□□□ -0.8
RNF31-223	ENST00000560754	TMEM14B	Q9NUH8	114 aa		10.08	□□□□□ -0.8
RNF31-223	ENST00000560754	ALMS1	Q8TCU4	4167 aa		10.07	□□□□□ -0.8
RNF31-223	ENST00000560754	OR4C46	A6NHA9	309 aa		10.07	□□□□□ -0.8
RNF31-223	ENST00000560754	SNAPC5	O75971	98 aa		10.07	□□□□□ -0.8
RNF31-223	ENST00000560754	ATP6V1G2	O95670	118 aa		10.07	□□□□□ -0.8
RNF31-223	ENST00000560754	PMP2	P02689	132 aa		10.07	□□□□□ -0.8
RNF31-223	ENST00000560754	RLN1	P04808	185 aa		10.07	□□□□□ -0.8
RNF31-223	ENST00000560754	CTSD	P07339	412 aa	Predicted RBP	10.07	□□□□□ -0.8
RNF31-223	ENST00000560754	G6PC	P35575	357 aa		10.07	□□□□□ -0.8
RNF31-223	ENST00000560754	RPS19	P39019	145 aa	Known RBP	10.07	□□□□□ -0.8
RNF31-223	ENST00000560754	CMC4	P56277	68 aa	Predicted RBP	10.07	□□□□□ -0.8
RNF31-223	ENST00000560754	CMTM1	Q8IZ96	169 aa		10.07	□□□□□ -0.8
RNF31-223	ENST00000560754	OR6F1	Q8NGZ6	308 aa		10.07	□□□□□ -0.8
RNF31-223	ENST00000560754	OR1P1	Q8NH06	330 aa		10.07	□□□□□ -0.8
RNF31-223	ENST00000560754	TMEM56	Q96MV1	263 aa		10.07	□□□□□ -0.8
RNF31-223	ENST00000560754	TXN2	Q99757	166 aa		10.07	□□□□□ -0.8
RNF31-223	ENST00000560754	IFT46	Q9NQC8	304 aa		10.07	□□□□□ -0.8
RNF31-223	ENST00000560754	PRND	Q9UKY0	176 aa		10.07	□□□□□ -0.8
RNF31-223	ENST00000560754	NSG2	Q9Y328	171 aa		10.07	□□□□□ -0.8
RNF31-223	ENST00000560754	IGHV3-21	A0A0B4J1V1	117 aa		10.06	□□□□□ -0.8
RNF31-223	ENST00000560754	DBX1	A6NMT0	343 aa		10.06	□□□□□ -0.8
RNF31-223	ENST00000560754		I3L2K1	104 aa		10.06	□□□□□ -0.8
RNF31-223	ENST00000560754	GPR31	O00270	319 aa		10.06	□□□□□ -0.8
RNF31-223	ENST00000560754	CHEK1	O14757	476 aa		10.06	□□□□□ -0.8
RNF31-223	ENST00000560754	PRSS3	P35030	304 aa		10.06	□□□□□ -0.8
RNF31-223	ENST00000560754	PMS2P11	Q13670	270 aa		10.06	□□□□□ -0.8
RNF31-223	ENST00000560754	UBE2NL	Q5JXB2	153 aa		10.06	□□□□□ -0.8
RNF31-223	ENST00000560754	FAM90A2P	Q658T7	463 aa		10.06	□□□□□ -0.8
RNF31-223	ENST00000560754	RNF2	Q99496	336 aa		10.06	□□□□□ -0.8
RNF31-223	ENST00000560754	C20orf24	Q9BUV8	137 aa		10.06	□□□□□ -0.8
RNF31-223	ENST00000560754	HINT2	Q9BX68	163 aa		10.06	□□□□□ -0.8
RNF31-223	ENST00000560754	IGHV3OR16-8	A0A075B7F1	116 aa		10.05	□□□□□ -0.8
RNF31-223	ENST00000560754	IGHV7-4-1	A0A0J9YVY3	117 aa		10.05	□□□□□ -0.8
RNF31-223	ENST00000560754	TAS2R46	P59540	309 aa		10.05	□□□□□ -0.8
RNF31-223	ENST00000560754	TAS2R20	P59543	309 aa		10.05	□□□□□ -0.8
RNF31-223	ENST00000560754	LPCAT3	Q6P1A2	487 aa		10.05	□□□□□ -0.8
RNF31-223	ENST00000560754	OR5H2	Q8NGV7	314 aa		10.05	□□□□□ -0.8
RNF31-223	ENST00000560754	SEC22A	Q96IW7	307 aa		10.05	□□□□□ -0.8
RNF31-223	ENST00000560754	TSC22D3	Q99576	134 aa		10.05	□□□□□ -0.8
RNF31-223	ENST00000560754	RHPN1-AS1	Q9BWJ2	59 aa		10.05	□□□□□ -0.8
RNF31-223	ENST00000560754	NXF2	Q9GZY0	626 aa	Known RBP	10.05	□□□□□ -0.8
RNF31-223	ENST00000560754	CSTL1	Q9H114	145 aa		10.05	□□□□□ -0.8
RNF31-223	ENST00000560754	KLK5	Q9Y337	293 aa	Predicted RBP	10.05	□□□□□ -0.8
RNF31-223	ENST00000560754	FRAS1	Q86XX4	4008 aa		10.04	□□□□□ -0.8
RNF31-223	ENST00000560754	C15orf61	A6NNL5	157 aa		10.04	□□□□□ -0.8
RNF31-223	ENST00000560754	ZNF207	O43670	478 aa	Known RBP	10.04	□□□□□ -0.8
RNF31-223	ENST00000560754	RPL35A	P18077	110 aa	Known RBP	10.04	□□□□□ -0.8
RNF31-223	ENST00000560754	TGFBR1	P36897	503 aa		10.04	□□□□□ -0.8
RNF31-223	ENST00000560754	MFAP4	P55083	255 aa		10.04	□□□□□ -0.8
RNF31-223	ENST00000560754	REL	Q04864	619 aa	Predicted RBP	10.04	□□□□□ -0.8
RNF31-223	ENST00000560754	NEDD8	Q15843	81 aa		10.04	□□□□□ -0.8
RNF31-223	ENST00000560754	KCTD21	Q4G0X4	260 aa		10.04	□□□□□ -0.8
RNF31-223	ENST00000560754		Q56UQ5	140 aa		10.04	□□□□□ -0.8
RNF31-223	ENST00000560754	TMEM69	Q5SWH9	247 aa		10.04	□□□□□ -0.8
RNF31-223	ENST00000560754	APRG1	Q8IVJ8	170 aa		10.04	□□□□□ -0.8
RNF31-223	ENST00000560754	TMEM217	Q8N7C4	229 aa		10.04	□□□□□ -0.8
RNF31-223	ENST00000560754	SAMD12	Q8N8I0	201 aa		10.04	□□□□□ -0.8
RNF31-223	ENST00000560754	UBAC2	Q8NBM4	344 aa		10.04	□□□□□ -0.8
RNF31-223	ENST00000560754	ZNF114	Q8NC26	417 aa		10.04	□□□□□ -0.8
RNF31-223	ENST00000560754	TMEM116	Q8NCL8	245 aa		10.04	□□□□□ -0.8
RNF31-223	ENST00000560754	TSPAN14	Q8NG11	270 aa		10.04	□□□□□ -0.8
RNF31-223	ENST00000560754	GPX8	Q8TED1	209 aa		10.04	□□□□□ -0.8
RNF31-223	ENST00000560754	TRAV14DV4	A0A0A6YYC5	116 aa		10.03	□□□□□ -0.8
RNF31-223	ENST00000560754	NUPL2	O15504	423 aa	Known RBP	10.03	□□□□□ -0.8
RNF31-223	ENST00000560754	IGKV1-39	P01597	117 aa		10.03	□□□□□ -0.8
RNF31-223	ENST00000560754	IGKV1D-39	P04432	117 aa		10.03	□□□□□ -0.8
RNF31-223	ENST00000560754	HRH1	P35367	487 aa		10.03	□□□□□ -0.8
RNF31-223	ENST00000560754	UCP3	P55916	312 aa		10.03	□□□□□ -0.8
RNF31-223	ENST00000560754	GATAD1	Q8WUU5	269 aa		10.03	□□□□□ -0.8
RNF31-223	ENST00000560754	SLC25A46	Q96AG3	418 aa		10.03	□□□□□ -0.8
RNF31-223	ENST00000560754	FXYD6	Q9H0Q3	95 aa		10.03	□□□□□ -0.8
RNF31-223	ENST00000560754	AGRN	O00468	2067 aa		10.02	□□□□□ -0.81
RNF31-223	ENST00000560754	MPTX1	A8MV57	137 aa		10.02	□□□□□ -0.81
RNF31-223	ENST00000560754	CD5	P06127	495 aa		10.02	□□□□□ -0.81
RNF31-223	ENST00000560754	HLA-DMA	P28067	261 aa		10.02	□□□□□ -0.81
RNF31-223	ENST00000560754	HSPE1	P61604	102 aa	Known RBP	10.02	□□□□□ -0.81
RNF31-223	ENST00000560754	PRCD	Q00LT1	54 aa		10.02	□□□□□ -0.81
RNF31-223	ENST00000560754	ZNF124	Q15973	351 aa		10.02	□□□□□ -0.81
RNF31-223	ENST00000560754	LGALS9C	Q6DKI2	356 aa		10.02	□□□□□ -0.81
RNF31-223	ENST00000560754	PHLDA1	Q8WV24	401 aa	Predicted RBP	10.02	□□□□□ -0.81
RNF31-223	ENST00000560754	YIPF6	Q96EC8	236 aa		10.02	□□□□□ -0.81
RNF31-223	ENST00000560754	CMTM3	Q96MX0	182 aa		10.02	□□□□□ -0.81
RNF31-223	ENST00000560754	RARRES2	Q99969	163 aa		10.02	□□□□□ -0.81
RNF31-223	ENST00000560754	C6orf62	Q9GZU0	229 aa	Predicted RBP	10.02	□□□□□ -0.81
RNF31-223	ENST00000560754	MT-CO2	P00403	227 aa		10.01	□□□□□ -0.81
RNF31-223	ENST00000560754	TSPAN5	P62079	268 aa		10.01	□□□□□ -0.81
RNF31-223	ENST00000560754	PHLDA2	Q53GA4	152 aa		10.01	□□□□□ -0.81
RNF31-223	ENST00000560754	PVRIG	Q6DKI7	326 aa		10.01	□□□□□ -0.81
RNF31-223	ENST00000560754	H2BFWT	Q7Z2G1	175 aa		10.01	□□□□□ -0.81
RNF31-223	ENST00000560754	TBC1D26	Q86UD7	250 aa		10.01	□□□□□ -0.81
RNF31-223	ENST00000560754	LILRB2	Q8N423	598 aa		10.01	□□□□□ -0.81
RNF31-223	ENST00000560754	OR4A16	Q8NH70	328 aa		10.01	□□□□□ -0.81
RNF31-223	ENST00000560754	VSIR	Q9H7M9	311 aa		10.01	□□□□□ -0.81
RNF31-223	ENST00000560754	SCPEP1	Q9HB40	452 aa		10.01	□□□□□ -0.81
RNF31-223	ENST00000560754	KMT2A	Q03164	3969 aa		10	□□□□□ -0.81
RNF31-223	ENST00000560754	IGHV3-49	A0A0A0MS15	119 aa		10	□□□□□ -0.81
RNF31-223	ENST00000560754	INS-IGF2	F8WCM5	200 aa		10	□□□□□ -0.81
RNF31-223	ENST00000560754	YIF1A	O95070	293 aa		10	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 142.1 ms