RNA–Protein interactions for RNA: ENST00000560311.1

IRF9-208, Transcript of interferon regulatory factor 9, human

TSL 2

Gene IRF9, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF9-208	ENST00000560311	LSM10	Q969L4	123 aa	Known RBP	4.95	□□□□□ -1.62
IRF9-208	ENST00000560311	EEF1AKMT3	Q96AZ1	226 aa		4.95	□□□□□ -1.62
IRF9-208	ENST00000560311	BCL7B	Q9BQE9	202 aa		4.95	□□□□□ -1.62
IRF9-208	ENST00000560311	SRSF8	Q9BRL6	282 aa	Known RBP	4.95	□□□□□ -1.62
IRF9-208	ENST00000560311	PEMT	Q9UBM1	199 aa		4.95	□□□□□ -1.62
IRF9-208	ENST00000560311	KLK11	Q9UBX7	282 aa		4.95	□□□□□ -1.62
IRF9-208	ENST00000560311	MTFP1	Q9UDX5	166 aa		4.95	□□□□□ -1.62
IRF9-208	ENST00000560311	FBXL7	Q9UJT9	491 aa		4.95	□□□□□ -1.62
IRF9-208	ENST00000560311	DMRT1	Q9Y5R6	373 aa		4.95	□□□□□ -1.62
IRF9-208	ENST00000560311	SMAD5-AS1	Q9Y6J3	95 aa		4.95	□□□□□ -1.62
IRF9-208	ENST00000560311		S4R3C0	116 aa		4.95	□□□□□ -1.62
IRF9-208	ENST00000560311	DNAH1	Q9P2D7	4330 aa		4.95	□□□□□ -1.62
IRF9-208	ENST00000560311	ALMS1	Q8TCU4	4167 aa		4.94	□□□□□ -1.62
IRF9-208	ENST00000560311		H0Y980	276 aa		4.94	□□□□□ -1.62
IRF9-208	ENST00000560311	KRAS	P01116	189 aa		4.94	□□□□□ -1.62
IRF9-208	ENST00000560311	IGKV1-39	P01597	117 aa		4.94	□□□□□ -1.62
IRF9-208	ENST00000560311	HLA-A	P01891	365 aa	Known RBP	4.94	□□□□□ -1.62
IRF9-208	ENST00000560311	IGKV1D-39	P04432	117 aa		4.94	□□□□□ -1.62
IRF9-208	ENST00000560311	IFNA6	P05013	189 aa		4.94	□□□□□ -1.62
IRF9-208	ENST00000560311	CSN3	P07498	182 aa		4.94	□□□□□ -1.62
IRF9-208	ENST00000560311	TRAPPC2	P0DI81	140 aa		4.94	□□□□□ -1.62
IRF9-208	ENST00000560311	TRAPPC2B	P0DI82	140 aa		4.94	□□□□□ -1.62
IRF9-208	ENST00000560311	PGAM2	P15259	253 aa		4.94	□□□□□ -1.62
IRF9-208	ENST00000560311	HIST1H1B	P16401	226 aa	Known RBP	4.94	□□□□□ -1.62
IRF9-208	ENST00000560311	EDN2	P20800	178 aa		4.94	□□□□□ -1.62
IRF9-208	ENST00000560311	GPR183	P32249	361 aa		4.94	□□□□□ -1.62
IRF9-208	ENST00000560311	ARL3	P36405	182 aa		4.94	□□□□□ -1.62
IRF9-208	ENST00000560311	RPL5	P46777	297 aa	Known RBP	4.94	□□□□□ -1.62
IRF9-208	ENST00000560311	TMBIM6	P55061	237 aa		4.94	□□□□□ -1.62
IRF9-208	ENST00000560311	UCP3	P55916	312 aa		4.94	□□□□□ -1.62
IRF9-208	ENST00000560311	TAS2R19	P59542	299 aa		4.94	□□□□□ -1.62
IRF9-208	ENST00000560311	RND3	P61587	244 aa		4.94	□□□□□ -1.62
IRF9-208	ENST00000560311	MRPS10	P82664	201 aa	Known RBP	4.94	□□□□□ -1.62
IRF9-208	ENST00000560311	WT1-AS	Q06250	92 aa		4.94	□□□□□ -1.62
IRF9-208	ENST00000560311	KLK9	Q2XQG4	91 aa		4.94	□□□□□ -1.62
IRF9-208	ENST00000560311	ZNF585B	Q52M93	769 aa		4.94	□□□□□ -1.62
IRF9-208	ENST00000560311	LCN12	Q6JVE5	192 aa		4.94	□□□□□ -1.62
IRF9-208	ENST00000560311	FAAP20	Q6NZ36	180 aa		4.94	□□□□□ -1.62
IRF9-208	ENST00000560311	LPCAT3	Q6P1A2	487 aa		4.94	□□□□□ -1.62
IRF9-208	ENST00000560311	CLEC19A	Q6UXS0	136 aa		4.94	□□□□□ -1.62
IRF9-208	ENST00000560311	LHFPL1	Q86WI0	220 aa		4.94	□□□□□ -1.62
IRF9-208	ENST00000560311		Q8N402	240 aa		4.94	□□□□□ -1.62
IRF9-208	ENST00000560311	OR10W1	Q8NGF6	305 aa		4.94	□□□□□ -1.62
IRF9-208	ENST00000560311	OR4D10	Q8NGI6	311 aa		4.94	□□□□□ -1.62
IRF9-208	ENST00000560311	C15orf40	Q8WUR7	153 aa		4.94	□□□□□ -1.62
IRF9-208	ENST00000560311	SMIM4	Q8WVI0	70 aa		4.94	□□□□□ -1.62
IRF9-208	ENST00000560311	MRGPRF	Q96AM1	343 aa		4.94	□□□□□ -1.62
IRF9-208	ENST00000560311	ISOC1	Q96CN7	298 aa		4.94	□□□□□ -1.62
IRF9-208	ENST00000560311	ZNF486	Q96H40	463 aa	Predicted RBP	4.94	□□□□□ -1.62
IRF9-208	ENST00000560311	ABHD1	Q96SE0	405 aa		4.94	□□□□□ -1.62
IRF9-208	ENST00000560311	ASCL2	Q99929	193 aa		4.94	□□□□□ -1.62
IRF9-208	ENST00000560311	HINT2	Q9BX68	163 aa		4.94	□□□□□ -1.62
IRF9-208	ENST00000560311	C6orf62	Q9GZU0	229 aa	Predicted RBP	4.94	□□□□□ -1.62
IRF9-208	ENST00000560311	FAM212B	Q9NTI7	297 aa	Predicted RBP	4.94	□□□□□ -1.62
IRF9-208	ENST00000560311	KLK9	Q9UKQ9	250 aa		4.94	□□□□□ -1.62
IRF9-208	ENST00000560311	PRND	Q9UKY0	176 aa		4.94	□□□□□ -1.62
IRF9-208	ENST00000560311	NSG2	Q9Y328	171 aa		4.94	□□□□□ -1.62
IRF9-208	ENST00000560311	OR51B2	Q9Y5P1	312 aa		4.94	□□□□□ -1.62
IRF9-208	ENST00000560311	TEX50	A0A1B0GTY4	177 aa		4.93	□□□□□ -1.62
IRF9-208	ENST00000560311		A8MWP6	167 aa		4.93	□□□□□ -1.62
IRF9-208	ENST00000560311	GABARAP	H6UMI1	98 aa		4.93	□□□□□ -1.62
IRF9-208	ENST00000560311	CTDSP2	O14595	271 aa		4.93	□□□□□ -1.62
IRF9-208	ENST00000560311	GGCT	O75223	188 aa	Known RBP	4.93	□□□□□ -1.62
IRF9-208	ENST00000560311	SNAPC5	O75971	98 aa		4.93	□□□□□ -1.62
IRF9-208	ENST00000560311	RAB3D	O95716	219 aa		4.93	□□□□□ -1.62
IRF9-208	ENST00000560311	CD74	P04233	296 aa		4.93	□□□□□ -1.62
IRF9-208	ENST00000560311	SERPINE2	P07093	398 aa		4.93	□□□□□ -1.62
IRF9-208	ENST00000560311	FRMD6-AS1	P0C7T7	363 aa		4.93	□□□□□ -1.62
IRF9-208	ENST00000560311	OR13C7	P0DN81	318 aa		4.93	□□□□□ -1.62
IRF9-208	ENST00000560311	PTBP1	P26599	531 aa	Known RBP eCLIP	4.93	□□□□□ -1.62
IRF9-208	ENST00000560311	MECP2	P51608	486 aa	Known RBP	4.93	□□□□□ -1.62
IRF9-208	ENST00000560311	PIGP	P57054	158 aa		4.93	□□□□□ -1.62
IRF9-208	ENST00000560311	SSBP1	Q04837	148 aa	Known RBP	4.93	□□□□□ -1.62
IRF9-208	ENST00000560311	IL18	Q14116	193 aa		4.93	□□□□□ -1.62
IRF9-208	ENST00000560311	MEF2D	Q14814	521 aa		4.93	□□□□□ -1.62
IRF9-208	ENST00000560311	TATDN3	Q17R31	274 aa		4.93	□□□□□ -1.62
IRF9-208	ENST00000560311	SCGB2B2	Q4G0G5	96 aa		4.93	□□□□□ -1.62
IRF9-208	ENST00000560311	STEAP1B	Q6NZ63	245 aa		4.93	□□□□□ -1.62
IRF9-208	ENST00000560311	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	4.93	□□□□□ -1.62
IRF9-208	ENST00000560311	SGPP2	Q8IWX5	399 aa		4.93	□□□□□ -1.62
IRF9-208	ENST00000560311	TMEM229B	Q8NBD8	167 aa		4.93	□□□□□ -1.62
IRF9-208	ENST00000560311	OR1L8	Q8NGR8	309 aa		4.93	□□□□□ -1.62
IRF9-208	ENST00000560311	OR13C8	Q8NGS7	320 aa		4.93	□□□□□ -1.62
IRF9-208	ENST00000560311	OR5B3	Q8NH48	314 aa		4.93	□□□□□ -1.62
IRF9-208	ENST00000560311	ZNF502	Q8TBZ5	544 aa		4.93	□□□□□ -1.62
IRF9-208	ENST00000560311	DYNLRB2	Q8TF09	96 aa		4.93	□□□□□ -1.62
IRF9-208	ENST00000560311	CACNG8	Q8WXS5	425 aa		4.93	□□□□□ -1.62
IRF9-208	ENST00000560311	CXorf58	Q96LI9	332 aa		4.93	□□□□□ -1.62
IRF9-208	ENST00000560311	TSC22D3	Q99576	134 aa		4.93	□□□□□ -1.62
IRF9-208	ENST00000560311	THAP7	Q9BT49	309 aa	Predicted RBP	4.93	□□□□□ -1.62
IRF9-208	ENST00000560311	SLIRP	Q9GZT3	109 aa	Known RBP	4.93	□□□□□ -1.62
IRF9-208	ENST00000560311	ZC4H2	Q9NQZ6	224 aa		4.93	□□□□□ -1.62
IRF9-208	ENST00000560311	NDUFA4L2	Q9NRX3	87 aa		4.93	□□□□□ -1.62
IRF9-208	ENST00000560311	TMEM14B	Q9NUH8	114 aa		4.93	□□□□□ -1.62
IRF9-208	ENST00000560311	SIGLEC8	Q9NYZ4	499 aa		4.93	□□□□□ -1.62
IRF9-208	ENST00000560311	F11R	Q9Y624	299 aa	Known RBP	4.93	□□□□□ -1.62
IRF9-208	ENST00000560311		U3KQK5	164 aa		4.93	□□□□□ -1.62
IRF9-208	ENST00000560311	PLEC	Q15149	4684 aa	Known RBP	4.93	□□□□□ -1.62
IRF9-208	ENST00000560311	TRBV7-1	A0A0A6YYK4	115 aa		4.92	□□□□□ -1.62
IRF9-208	ENST00000560311	IGHV3-21	A0A0B4J1V1	117 aa		4.92	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 53 ms