RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 OR1L1Q8NH94 360 aa1.91□□□□□ -2.1
LRRC28-218ENST00000560236 AGR3Q8TD06 166 aa1.91□□□□□ -2.1
LRRC28-218ENST00000560236 CASTOR1Q8WTX7 329 aa1.91□□□□□ -2.1
LRRC28-218ENST00000560236 TRUB1Q8WWH5 349 aaKnown RBP1.91□□□□□ -2.1
LRRC28-218ENST00000560236 GTF2H4Q92759 462 aa1.91□□□□□ -2.1
LRRC28-218ENST00000560236 GHSRQ92847 366 aa1.91□□□□□ -2.1
LRRC28-218ENST00000560236 CENPNQ96H22 339 aaPredicted RBP1.91□□□□□ -2.1
LRRC28-218ENST00000560236 CNBD2Q96M20 576 aa1.91□□□□□ -2.1
LRRC28-218ENST00000560236 PRRC1Q96M27 445 aa1.91□□□□□ -2.1
LRRC28-218ENST00000560236 CNN2Q99439 309 aaKnown RBP1.91□□□□□ -2.1
LRRC28-218ENST00000560236 RNF5Q99942 180 aa1.91□□□□□ -2.1
LRRC28-218ENST00000560236 HOPXQ9BPY8 73 aaPredicted RBP1.91□□□□□ -2.1
LRRC28-218ENST00000560236 EXOSC4Q9NPD3 245 aaKnown RBP1.91□□□□□ -2.1
LRRC28-218ENST00000560236 RPRD1BQ9NQG5 326 aaKnown RBP1.91□□□□□ -2.1
LRRC28-218ENST00000560236 CMTM6Q9NX76 183 aa1.91□□□□□ -2.1
LRRC28-218ENST00000560236 SMPD3Q9NY59 655 aaPredicted RBP1.91□□□□□ -2.1
LRRC28-218ENST00000560236 CALYQ9NYX4 217 aa1.91□□□□□ -2.1
LRRC28-218ENST00000560236 MTCH1Q9NZJ7 389 aa1.91□□□□□ -2.1
LRRC28-218ENST00000560236 IER3IP1Q9Y5U9 82 aa1.91□□□□□ -2.1
LRRC28-218ENST00000560236 U3KQV3 271 aa1.91□□□□□ -2.1
LRRC28-218ENST00000560236 LPAP08519 4548 aa1.91□□□□□ -2.1
LRRC28-218ENST00000560236 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.9□□□□□ -2.11
LRRC28-218ENST00000560236 A0A1B0GW64 132 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 DHRS12A0PJE2 317 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 TMEM189A5PLL7 270 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 FAM223BA6NKX1 122 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 DHRS7CA6NNS2 312 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 ZNF736B4DX44 427 aaPredicted RBP1.9□□□□□ -2.11
LRRC28-218ENST00000560236 ZNF593O00488 134 aaPredicted RBP1.9□□□□□ -2.11
LRRC28-218ENST00000560236 MRASO14807 208 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 UBDO15205 165 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 RS1O15537 224 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 LANCL1O43813 399 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 PFDN1O60925 122 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 RBBP9O75884 186 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 GABARAPO95166 117 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 CA1P00915 261 aaPredicted RBP1.9□□□□□ -2.11
LRRC28-218ENST00000560236 NPPAP01160 153 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 TRBV12-3P01733 135 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 SEMG1P04279 462 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 H2BFMP0C1H6 154 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 SPART-AS1P0CW21 52 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 GALP22466 123 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 CRHBPP24387 322 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 FMO3P31513 532 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 KCNJ3P48549 501 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 PSMD7P51665 324 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 POLR2JP52435 117 aaKnown RBP1.9□□□□□ -2.11
LRRC28-218ENST00000560236 PLGLAQ15195 96 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 USF2Q15853 346 aaPredicted RBP1.9□□□□□ -2.11
LRRC28-218ENST00000560236 PRR4Q16378 134 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 RBM48Q5RL73 367 aaKnown RBP1.9□□□□□ -2.11
LRRC28-218ENST00000560236 TMEM42Q69YG0 159 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 TBPL2Q6SJ96 375 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 SLC25A48Q6ZT89 311 aaKnown RBP1.9□□□□□ -2.11
LRRC28-218ENST00000560236 MBOAT2Q6ZWT7 520 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 DHFR2Q86XF0 187 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 CLVS1Q8IUQ0 354 aaPredicted RBP1.9□□□□□ -2.11
LRRC28-218ENST00000560236 FAM223AQ8IWN6 122 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 MICU2Q8IYU8 434 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 OFCC1Q8IZS5 231 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 FAM58AQ8N1B3 248 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 CBR4Q8N4T8 237 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 NECAP1Q8NC96 275 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 PROKR2Q8NFJ6 384 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 OR51T1Q8NGJ9 327 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 OR5B3Q8NH48 314 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 GIPC3Q8TF64 312 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 RAB2BQ8WUD1 216 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 CANT1Q8WVQ1 401 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 RNF133Q8WVZ7 376 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 YIPF6Q96EC8 236 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 ERMAPQ96PL5 475 aaPredicted RBP1.9□□□□□ -2.11
LRRC28-218ENST00000560236 NMNAT3Q96T66 252 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 CGREF1Q99674 301 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 CIB1Q99828 191 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 SULT4A1Q9BR01 284 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 CHRDL1Q9BU40 450 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 C9orf16Q9BUW7 83 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 NXF2Q9GZY0 626 aaKnown RBP1.9□□□□□ -2.11
LRRC28-218ENST00000560236 COMMD4Q9H0A8 199 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 GABARAPL1Q9H0R8 117 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 Q9H3A6 140 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 ANKRD19PQ9H560 264 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 DUSP21Q9H596 190 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 GORASP2Q9H8Y8 452 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 TMEM14BQ9NUH8 114 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 PAK1IP1Q9NWT1 392 aaPredicted RBP1.9□□□□□ -2.11
LRRC28-218ENST00000560236 ZNF221Q9UK13 617 aa1.9□□□□□ -2.11
LRRC28-218ENST00000560236 FAM32AQ9Y421 112 aaKnown RBP1.9□□□□□ -2.11
LRRC28-218ENST00000560236 PUS1Q9Y606 427 aaKnown RBP eCLIP1.9□□□□□ -2.11
LRRC28-218ENST00000560236 MEIKINA0A087WXM9 373 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 TRBV2A0A0J9YWF9 115 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 A0A1W2PPE3 182 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 TMEM213A2RRL7 107 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 SIRPB1O00241 398 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 CDC42EP2O14613 210 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 ORC5O43913 435 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 ENTPD6O75354 484 aa1.89□□□□□ -2.11
LRRC28-218ENST00000560236 DHRS3O75911 302 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms