RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 CGB1A6NKQ9 187 aa9.43□□□□□ -0.9
SNX1-209ENST00000559961 K7EMT4 169 aa9.43□□□□□ -0.9
SNX1-209ENST00000559961 UBE2CO00762 179 aa9.43□□□□□ -0.9
SNX1-209ENST00000559961 SCGB2A1O75556 95 aa9.43□□□□□ -0.9
SNX1-209ENST00000559961 PGAM2P15259 253 aa9.43□□□□□ -0.9
SNX1-209ENST00000559961 EDN2P20800 178 aa9.43□□□□□ -0.9
SNX1-209ENST00000559961 RORCP51449 518 aa9.43□□□□□ -0.9
SNX1-209ENST00000559961 MFAP4P55083 255 aa9.43□□□□□ -0.9
SNX1-209ENST00000559961 PAFAH1B2P68402 229 aa9.43□□□□□ -0.9
SNX1-209ENST00000559961 WT1-ASQ06250 92 aa9.43□□□□□ -0.9
SNX1-209ENST00000559961 UNQ9165/PRO28630Q6UXU0 137 aa9.43□□□□□ -0.9
SNX1-209ENST00000559961 STPG3Q8N7X2 389 aa9.43□□□□□ -0.9
SNX1-209ENST00000559961 OR1P1Q8NH06 330 aa9.43□□□□□ -0.9
SNX1-209ENST00000559961 SCARB1Q8WTV0 552 aa9.43□□□□□ -0.9
SNX1-209ENST00000559961 C15orf40Q8WUR7 153 aa9.43□□□□□ -0.9
SNX1-209ENST00000559961 TMEM190Q8WZ59 177 aa9.43□□□□□ -0.9
SNX1-209ENST00000559961 YIPF6Q96EC8 236 aa9.43□□□□□ -0.9
SNX1-209ENST00000559961 MISP3Q96FF7 219 aa9.43□□□□□ -0.9
SNX1-209ENST00000559961 PDCD10Q9BUL8 212 aa9.43□□□□□ -0.9
SNX1-209ENST00000559961 STAB2Q8WWQ8 2551 aa9.43□□□□□ -0.9
SNX1-209ENST00000559961 HUWE1Q7Z6Z7 4374 aaKnown RBP9.42□□□□□ -0.9
SNX1-209ENST00000559961 TSPAN4O14817 238 aa9.42□□□□□ -0.9
SNX1-209ENST00000559961 CD5P06127 495 aa9.42□□□□□ -0.9
SNX1-209ENST00000559961 TGFBR1P36897 503 aa9.42□□□□□ -0.9
SNX1-209ENST00000559961 SNCAP37840 140 aa9.42□□□□□ -0.9
SNX1-209ENST00000559961 SUB1P53999 127 aaKnown RBP eCLIP9.42□□□□□ -0.9
SNX1-209ENST00000559961 TBC1D26Q86UD7 250 aa9.42□□□□□ -0.9
SNX1-209ENST00000559961 TMEM217Q8N7C4 229 aa9.42□□□□□ -0.9
SNX1-209ENST00000559961 GPX8Q8TED1 209 aa9.42□□□□□ -0.9
SNX1-209ENST00000559961 TXN2Q99757 166 aa9.42□□□□□ -0.9
SNX1-209ENST00000559961 ENY2Q9NPA8 101 aa9.42□□□□□ -0.9
SNX1-209ENST00000559961 ANAPC10Q9UM13 185 aa9.42□□□□□ -0.9
SNX1-209ENST00000559961 RYR3Q15413 4870 aa9.42□□□□□ -0.9
SNX1-209ENST00000559961 TNCP24821 2201 aa9.41□□□□□ -0.9
SNX1-209ENST00000559961 CXorf65A6NEN9 183 aa9.41□□□□□ -0.9
SNX1-209ENST00000559961 C15orf61A6NNL5 157 aa9.41□□□□□ -0.9
SNX1-209ENST00000559961 C15orf62A8K5M9 175 aa9.41□□□□□ -0.9
SNX1-209ENST00000559961 SPRY2O43597 315 aa9.41□□□□□ -0.9
SNX1-209ENST00000559961 GNG7O60262 68 aa9.41□□□□□ -0.9
SNX1-209ENST00000559961 UCP3P55916 312 aa9.41□□□□□ -0.9
SNX1-209ENST00000559961 RNASE10Q5GAN6 216 aaKnown RBP9.41□□□□□ -0.9
SNX1-209ENST00000559961 LYSMD2Q8IV50 215 aa9.41□□□□□ -0.9
SNX1-209ENST00000559961 RNASE11Q8TAA1 199 aaKnown RBP9.41□□□□□ -0.9
SNX1-209ENST00000559961 PINX1Q96BK5 328 aaKnown RBP9.41□□□□□ -0.9
SNX1-209ENST00000559961 GINS3Q9BRX5 216 aa9.41□□□□□ -0.9
SNX1-209ENST00000559961 FXYD6Q9H0Q3 95 aa9.41□□□□□ -0.9
SNX1-209ENST00000559961 TMEM14BQ9NUH8 114 aa9.41□□□□□ -0.9
SNX1-209ENST00000559961 TRAV14DV4A0A0A6YYC5 116 aa9.4□□□□□ -0.9
SNX1-209ENST00000559961 IFNA17P01571 189 aa9.4□□□□□ -0.9
SNX1-209ENST00000559961 NPBWR1P48145 328 aa9.4□□□□□ -0.9
SNX1-209ENST00000559961 AKR1C2P52895 323 aa9.4□□□□□ -0.9
SNX1-209ENST00000559961 HSPE1P61604 102 aaKnown RBP9.4□□□□□ -0.9
SNX1-209ENST00000559961 VBP1P61758 197 aa9.4□□□□□ -0.9
SNX1-209ENST00000559961 Q6ZWC4 215 aa9.4□□□□□ -0.9
SNX1-209ENST00000559961 SLC35G3Q8N808 338 aa9.4□□□□□ -0.9
SNX1-209ENST00000559961 TMEM116Q8NCL8 245 aa9.4□□□□□ -0.9
SNX1-209ENST00000559961 DUSP18Q8NEJ0 188 aa9.4□□□□□ -0.9
SNX1-209ENST00000559961 ZFAND1Q8TCF1 268 aa9.4□□□□□ -0.9
SNX1-209ENST00000559961 GALNT14Q96FL9 552 aa9.4□□□□□ -0.9
SNX1-209ENST00000559961 ZNF486Q96H40 463 aaPredicted RBP9.4□□□□□ -0.9
SNX1-209ENST00000559961 FUNDC2Q9BWH2 189 aa9.4□□□□□ -0.9
SNX1-209ENST00000559961 COPZ2Q9P299 210 aa9.4□□□□□ -0.9
SNX1-209ENST00000559961 UBQLN2Q9UHD9 624 aa9.4□□□□□ -0.9
SNX1-209ENST00000559961 TP53TG1Q9Y2A0 90 aa9.4□□□□□ -0.9
SNX1-209ENST00000559961 BOLA1Q9Y3E2 137 aa9.4□□□□□ -0.9
SNX1-209ENST00000559961 KIR2DL5BA0A0G2JN68 375 aa9.39□□□□□ -0.91
SNX1-209ENST00000559961 KIR2DL5BA0A0G2JPC4 375 aa9.39□□□□□ -0.91
SNX1-209ENST00000559961 ZNF207O43670 478 aaKnown RBP9.39□□□□□ -0.91
SNX1-209ENST00000559961 HPGDSO60760 199 aa9.39□□□□□ -0.91
SNX1-209ENST00000559961 NCS1P62166 190 aa9.39□□□□□ -0.91
SNX1-209ENST00000559961 KIR2DL5AQ8N109 375 aa9.39□□□□□ -0.91
SNX1-209ENST00000559961 CCDC71LQ8N9Z2 235 aa9.39□□□□□ -0.91
SNX1-209ENST00000559961 KIR2DL5BQ8NHK3 375 aa9.39□□□□□ -0.91
SNX1-209ENST00000559961 RRNAD1Q96FB5 475 aaKnown RBP9.39□□□□□ -0.91
SNX1-209ENST00000559961 OVOL2Q9BRP0 275 aa9.39□□□□□ -0.91
SNX1-209ENST00000559961 CHRDL1Q9BU40 450 aa9.39□□□□□ -0.91
SNX1-209ENST00000559961 RHPN1-AS1Q9BWJ2 59 aa9.39□□□□□ -0.91
SNX1-209ENST00000559961 TMEM231Q9H6L2 316 aa9.39□□□□□ -0.91
SNX1-209ENST00000559961 SMPXQ9UHP9 88 aa9.39□□□□□ -0.91
SNX1-209ENST00000559961 IGHV3OR16-8A0A075B7F1 116 aa9.38□□□□□ -0.91
SNX1-209ENST00000559961 IGHV7-4-1A0A0J9YVY3 117 aa9.38□□□□□ -0.91
SNX1-209ENST00000559961 K7EIM0 57 aa9.38□□□□□ -0.91
SNX1-209ENST00000559961 DNASE2O00115 360 aaPredicted RBP9.38□□□□□ -0.91
SNX1-209ENST00000559961 CORTO00230 105 aa9.38□□□□□ -0.91
SNX1-209ENST00000559961 CTSDP07339 412 aaPredicted RBP9.38□□□□□ -0.91
SNX1-209ENST00000559961 CTSGP08311 255 aa9.38□□□□□ -0.91
SNX1-209ENST00000559961 ELK1P19419 428 aa9.38□□□□□ -0.91
SNX1-209ENST00000559961 TBPP20226 339 aa9.38□□□□□ -0.91
SNX1-209ENST00000559961 RPL11P62913 178 aaKnown RBP9.38□□□□□ -0.91
SNX1-209ENST00000559961 PRCDQ00LT1 54 aa9.38□□□□□ -0.91
SNX1-209ENST00000559961 TRIM16LQ309B1 348 aa9.38□□□□□ -0.91
SNX1-209ENST00000559961 ARRDC1Q8N5I2 433 aa9.38□□□□□ -0.91
SNX1-209ENST00000559961 MRGPRFQ96AM1 343 aa9.38□□□□□ -0.91
SNX1-209ENST00000559961 NARS2Q96I59 477 aaKnown RBP9.38□□□□□ -0.91
SNX1-209ENST00000559961 SEC22AQ96IW7 307 aa9.38□□□□□ -0.91
SNX1-209ENST00000559961 KLK5Q9Y337 293 aaPredicted RBP9.38□□□□□ -0.91
SNX1-209ENST00000559961 NUPR2A6NF83 97 aa9.37□□□□□ -0.91
SNX1-209ENST00000559961 M0QYG6 137 aa9.37□□□□□ -0.91
SNX1-209ENST00000559961 B3GALNT1O75752 331 aa9.37□□□□□ -0.91
SNX1-209ENST00000559961 MT-CO2P00403 227 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms