RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 SLC24A4Q8NFF2 622 aa9.64□□□□□ -0.87
HERC1-205ENST00000559886 BSCL2Q96G97 398 aaPredicted RBP9.64□□□□□ -0.87
HERC1-205ENST00000559886 PMS2P5A8MQ11 134 aa9.64□□□□□ -0.87
HERC1-205ENST00000559886 SCGB2A2Q13296 93 aa9.64□□□□□ -0.87
HERC1-205ENST00000559886 OPCMLQ14982 345 aa9.64□□□□□ -0.87
HERC1-205ENST00000559886 CDC42EP3Q9UKI2 254 aa9.64□□□□□ -0.87
HERC1-205ENST00000559886 BCL2L11O43521 198 aa9.63□□□□□ -0.87
HERC1-205ENST00000559886 RNASE2P10153 161 aaKnown RBP9.63□□□□□ -0.87
HERC1-205ENST00000559886 EGR2P11161 476 aaPredicted RBP9.63□□□□□ -0.87
HERC1-205ENST00000559886 AREGP15514 252 aa9.63□□□□□ -0.87
HERC1-205ENST00000559886 NPY1RP25929 384 aa9.63□□□□□ -0.87
HERC1-205ENST00000559886 SNCAP37840 140 aa9.63□□□□□ -0.87
HERC1-205ENST00000559886 C2orf83Q53S99 150 aa9.63□□□□□ -0.87
HERC1-205ENST00000559886 HAPLN4Q86UW8 402 aa9.63□□□□□ -0.87
HERC1-205ENST00000559886 STPG2Q8N412 459 aa9.63□□□□□ -0.87
HERC1-205ENST00000559886 FAM103A1Q9BTL3 118 aaKnown RBP9.63□□□□□ -0.87
HERC1-205ENST00000559886 PAIP2BQ9ULR5 123 aaKnown RBP9.63□□□□□ -0.87
HERC1-205ENST00000559886 KANTRA0A1W2PQU2 76 aa9.63□□□□□ -0.87
HERC1-205ENST00000559886 SH2D7A6NKC9 451 aaPredicted RBP9.63□□□□□ -0.87
HERC1-205ENST00000559886 TAAR5O14804 337 aa9.63□□□□□ -0.87
HERC1-205ENST00000559886 APELAP0DMC3 54 aa9.63□□□□□ -0.87
HERC1-205ENST00000559886 ARL16Q0P5N6 197 aa9.63□□□□□ -0.87
HERC1-205ENST00000559886 TMEM86BQ8N661 226 aa9.63□□□□□ -0.87
HERC1-205ENST00000559886 TMEM217Q8N7C4 229 aa9.63□□□□□ -0.87
HERC1-205ENST00000559886 ZNF114Q8NC26 417 aa9.63□□□□□ -0.87
HERC1-205ENST00000559886 ARPC5LQ9BPX5 153 aa9.63□□□□□ -0.87
HERC1-205ENST00000559886 FBXL17Q9UF56 701 aa9.63□□□□□ -0.87
HERC1-205ENST00000559886 FBXO7Q9Y3I1 522 aa9.63□□□□□ -0.87
HERC1-205ENST00000559886 SCAF4O95104 1147 aaKnown RBP9.62□□□□□ -0.87
HERC1-205ENST00000559886 REG1AP05451 166 aa9.62□□□□□ -0.87
HERC1-205ENST00000559886 OR8U8P0C7N1 319 aa9.62□□□□□ -0.87
HERC1-205ENST00000559886 RAB11AP62491 216 aa9.62□□□□□ -0.87
HERC1-205ENST00000559886 OR5C1Q8NGR4 320 aa9.62□□□□□ -0.87
HERC1-205ENST00000559886 SGMS2Q8NHU3 365 aa9.62□□□□□ -0.87
HERC1-205ENST00000559886 P2RX4Q99571 388 aa9.62□□□□□ -0.87
HERC1-205ENST00000559886 TNFRSF19Q9NS68 423 aa9.62□□□□□ -0.87
HERC1-205ENST00000559886 SRD5A1P18405 259 aa9.62□□□□□ -0.87
HERC1-205ENST00000559886 BLCAPP62952 87 aa9.62□□□□□ -0.87
HERC1-205ENST00000559886 HBG1P69891 147 aa9.62□□□□□ -0.87
HERC1-205ENST00000559886 HBG2P69892 147 aa9.62□□□□□ -0.87
HERC1-205ENST00000559886 OR8G2PQ6IF36 304 aa9.62□□□□□ -0.87
HERC1-205ENST00000559886 RBMS3Q6XE24 437 aaKnown RBP9.62□□□□□ -0.87
HERC1-205ENST00000559886 OR10P1Q8NGE3 313 aa9.62□□□□□ -0.87
HERC1-205ENST00000559886 OR1S2Q8NGQ3 325 aa9.62□□□□□ -0.87
HERC1-205ENST00000559886 ABHD5Q8WTS1 349 aa9.62□□□□□ -0.87
HERC1-205ENST00000559886 SMIM3Q9BZL3 60 aa9.62□□□□□ -0.87
HERC1-205ENST00000559886 GSX1Q9H4S2 264 aaPredicted RBP9.62□□□□□ -0.87
HERC1-205ENST00000559886 CYTL1Q9NRR1 136 aa9.62□□□□□ -0.87
HERC1-205ENST00000559886 LINC01548A6NM66 108 aa9.61□□□□□ -0.87
HERC1-205ENST00000559886 PRSS46E5RG02 174 aa9.61□□□□□ -0.87
HERC1-205ENST00000559886 IGHG2P01859 326 aa9.61□□□□□ -0.87
HERC1-205ENST00000559886 IFNA4P05014 189 aa9.61□□□□□ -0.87
HERC1-205ENST00000559886 SUB1P53999 127 aaKnown RBP eCLIP9.61□□□□□ -0.87
HERC1-205ENST00000559886 ASPHD1Q5U4P2 390 aa9.61□□□□□ -0.87
HERC1-205ENST00000559886 ETV3LQ6ZN32 361 aa9.61□□□□□ -0.87
HERC1-205ENST00000559886 WFDC1Q9HC57 220 aa9.61□□□□□ -0.87
HERC1-205ENST00000559886 PARP11Q9NR21 331 aa9.61□□□□□ -0.87
HERC1-205ENST00000559886 F8P00451 2351 aa9.61□□□□□ -0.87
HERC1-205ENST00000559886 NSD1Q96L73 2696 aaPredicted RBP9.61□□□□□ -0.87
HERC1-205ENST00000559886 ATP6V0E1O15342 81 aa9.61□□□□□ -0.87
HERC1-205ENST00000559886 CTRB1P17538 263 aa9.61□□□□□ -0.87
HERC1-205ENST00000559886 SLC38A11Q08AI6 406 aa9.61□□□□□ -0.87
HERC1-205ENST00000559886 PVRIGQ6DKI7 326 aa9.61□□□□□ -0.87
HERC1-205ENST00000559886 CTRB2Q6GPI1 263 aa9.61□□□□□ -0.87
HERC1-205ENST00000559886 Q71RC1 249 aaPredicted RBP9.61□□□□□ -0.87
HERC1-205ENST00000559886 LFNGQ8NES3 379 aa9.61□□□□□ -0.87
HERC1-205ENST00000559886 OR1P1Q8NH06 330 aa9.61□□□□□ -0.87
HERC1-205ENST00000559886 PINX1Q96BK5 328 aaKnown RBP9.61□□□□□ -0.87
HERC1-205ENST00000559886 F11RQ9Y624 299 aaKnown RBP9.61□□□□□ -0.87
HERC1-205ENST00000559886 NPIPB5A8MRT5 1133 aa9.6□□□□□ -0.87
HERC1-205ENST00000559886 CRYGCP07315 174 aa9.6□□□□□ -0.87
HERC1-205ENST00000559886 CLINT1Q14677 625 aa9.6□□□□□ -0.87
HERC1-205ENST00000559886 SLC51BQ86UW2 128 aa9.6□□□□□ -0.87
HERC1-205ENST00000559886 TTC9CQ8N5M4 171 aa9.6□□□□□ -0.87
HERC1-205ENST00000559886 CRIP2P52943 208 aaPredicted RBP9.6□□□□□ -0.87
HERC1-205ENST00000559886 MFAP2P55001 183 aa9.6□□□□□ -0.87
HERC1-205ENST00000559886 AKIRIN2Q53H80 203 aa9.6□□□□□ -0.87
HERC1-205ENST00000559886 C9orf152Q5JTZ5 239 aa9.6□□□□□ -0.87
HERC1-205ENST00000559886 Q6ZS46 218 aa9.6□□□□□ -0.87
HERC1-205ENST00000559886 TMEM68Q96MH6 324 aa9.6□□□□□ -0.87
HERC1-205ENST00000559886 ATP5SQ99766 215 aa9.6□□□□□ -0.87
HERC1-205ENST00000559886 ZNF471Q9BX82 626 aaPredicted RBP9.6□□□□□ -0.87
HERC1-205ENST00000559886 DNAJC9-AS1A6NH13 148 aa9.59□□□□□ -0.87
HERC1-205ENST00000559886 INAFM1C9JVW0 142 aa9.59□□□□□ -0.87
HERC1-205ENST00000559886 FBXO24O75426 580 aa9.59□□□□□ -0.87
HERC1-205ENST00000559886 JTBO76095 146 aa9.59□□□□□ -0.87
HERC1-205ENST00000559886 IGF1P05019 195 aa9.59□□□□□ -0.87
HERC1-205ENST00000559886 ATP6V1FQ16864 119 aa9.59□□□□□ -0.87
HERC1-205ENST00000559886 RPL7L1Q6DKI1 246 aaKnown RBP9.59□□□□□ -0.87
HERC1-205ENST00000559886 C19orf35Q6ZS72 473 aa9.59□□□□□ -0.87
HERC1-205ENST00000559886 SLC35E3Q7Z769 313 aa9.59□□□□□ -0.87
HERC1-205ENST00000559886 LILRB2Q8N423 598 aa9.59□□□□□ -0.87
HERC1-205ENST00000559886 RNASEH2CQ8TDP1 164 aaKnown RBP9.59□□□□□ -0.87
HERC1-205ENST00000559886 DUX5Q96PT3 197 aa9.59□□□□□ -0.87
HERC1-205ENST00000559886 GON7Q9BXV9 100 aa9.59□□□□□ -0.87
HERC1-205ENST00000559886 WNT10AQ9GZT5 417 aa9.59□□□□□ -0.87
HERC1-205ENST00000559886 DMRT1Q9Y5R6 373 aa9.59□□□□□ -0.87
HERC1-205ENST00000559886 DFFBO76075 338 aa9.59□□□□□ -0.87
HERC1-205ENST00000559886 UBAC2Q8NBM4 344 aa9.59□□□□□ -0.87
HERC1-205ENST00000559886 STOML3Q8TAV4 291 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms