RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 OR2A7Q96R45 310 aa6.41□□□□□ -1.38
SNRPA1-208ENST00000559686 RHPN1-AS1Q9BWJ2 59 aa6.41□□□□□ -1.38
SNRPA1-208ENST00000559686 TM2D1Q9BX74 207 aa6.41□□□□□ -1.38
SNRPA1-208ENST00000559686 BABAM2Q9NXR7 383 aa6.41□□□□□ -1.38
SNRPA1-208ENST00000559686 GHRLQ9UBU3 117 aa6.41□□□□□ -1.38
SNRPA1-208ENST00000559686 CLEC2DQ9UHP7 191 aa6.41□□□□□ -1.38
SNRPA1-208ENST00000559686 MGAT4AQ9UM21 535 aa6.41□□□□□ -1.38
SNRPA1-208ENST00000559686 AP4S1Q9Y587 144 aa6.41□□□□□ -1.38
SNRPA1-208ENST00000559686 ETV7Q9Y603 341 aa6.41□□□□□ -1.38
SNRPA1-208ENST00000559686 IGHV3-66A0A0C4DH42 116 aa6.4□□□□□ -1.38
SNRPA1-208ENST00000559686 IGHV7-4-1A0A0J9YVY3 117 aa6.4□□□□□ -1.38
SNRPA1-208ENST00000559686 KNCNA6PVL3 124 aa6.4□□□□□ -1.38
SNRPA1-208ENST00000559686 DNASE2O00115 360 aaPredicted RBP6.4□□□□□ -1.38
SNRPA1-208ENST00000559686 EI24O14681 340 aa6.4□□□□□ -1.38
SNRPA1-208ENST00000559686 CHEK1O14757 476 aa6.4□□□□□ -1.38
SNRPA1-208ENST00000559686 YIF1AO95070 293 aa6.4□□□□□ -1.38
SNRPA1-208ENST00000559686 ATP6V1G2O95670 118 aa6.4□□□□□ -1.38
SNRPA1-208ENST00000559686 UBBP0CG47 229 aa6.4□□□□□ -1.38
SNRPA1-208ENST00000559686 GABRB1P18505 474 aa6.4□□□□□ -1.38
SNRPA1-208ENST00000559686 RAB6AP20340 208 aa6.4□□□□□ -1.38
SNRPA1-208ENST00000559686 SERPINB10P48595 397 aa6.4□□□□□ -1.38
SNRPA1-208ENST00000559686 EMP1P54849 157 aa6.4□□□□□ -1.38
SNRPA1-208ENST00000559686 RPL30P62888 115 aaKnown RBP6.4□□□□□ -1.38
SNRPA1-208ENST00000559686 INSL4Q14641 139 aa6.4□□□□□ -1.38
SNRPA1-208ENST00000559686 P2RY14Q15391 338 aa6.4□□□□□ -1.38
SNRPA1-208ENST00000559686 SMN1Q16637 294 aaKnown RBP6.4□□□□□ -1.38
SNRPA1-208ENST00000559686 KCTD9Q7L273 389 aa6.4□□□□□ -1.38
SNRPA1-208ENST00000559686 TCF24Q7RTU0 167 aa6.4□□□□□ -1.38
SNRPA1-208ENST00000559686 TMEM116Q8NCL8 245 aa6.4□□□□□ -1.38
SNRPA1-208ENST00000559686 ZNF680Q8NEM1 530 aa6.4□□□□□ -1.38
SNRPA1-208ENST00000559686 OR4A4PQ8NGN8 299 aa6.4□□□□□ -1.38
SNRPA1-208ENST00000559686 PGLYRP3Q96LB9 341 aa6.4□□□□□ -1.38
SNRPA1-208ENST00000559686 Q96MT0 163 aa6.4□□□□□ -1.38
SNRPA1-208ENST00000559686 GINS4Q9BRT9 223 aa6.4□□□□□ -1.38
SNRPA1-208ENST00000559686 LPAR5Q9H1C0 372 aa6.4□□□□□ -1.38
SNRPA1-208ENST00000559686 TBC1D24Q9ULP9 559 aa6.4□□□□□ -1.38
SNRPA1-208ENST00000559686 AGRNO00468 2067 aa6.4□□□□□ -1.39
SNRPA1-208ENST00000559686 CGB1A6NKQ9 187 aa6.39□□□□□ -1.39
SNRPA1-208ENST00000559686 ZNF705EA8MWA4 302 aaPredicted RBP6.39□□□□□ -1.39
SNRPA1-208ENST00000559686 K7EMT4 169 aa6.39□□□□□ -1.39
SNRPA1-208ENST00000559686 NDUFA4O00483 81 aa6.39□□□□□ -1.39
SNRPA1-208ENST00000559686 GATCO43716 136 aaKnown RBP6.39□□□□□ -1.39
SNRPA1-208ENST00000559686 PTBP1P26599 531 aaKnown RBP eCLIP6.39□□□□□ -1.39
SNRPA1-208ENST00000559686 PAFAH1B2P68402 229 aa6.39□□□□□ -1.39
SNRPA1-208ENST00000559686 ARFRP1Q13795 201 aa6.39□□□□□ -1.39
SNRPA1-208ENST00000559686 Q56UQ5 140 aa6.39□□□□□ -1.39
SNRPA1-208ENST00000559686 ZNF367Q7RTV3 350 aa6.39□□□□□ -1.39
SNRPA1-208ENST00000559686 C6orf223Q8N319 242 aa6.39□□□□□ -1.39
SNRPA1-208ENST00000559686 TMEM167AQ8TBQ9 72 aa6.39□□□□□ -1.39
SNRPA1-208ENST00000559686 TCTEX1D2Q8WW35 142 aa6.39□□□□□ -1.39
SNRPA1-208ENST00000559686 BSCL2Q96G97 398 aaPredicted RBP6.39□□□□□ -1.39
SNRPA1-208ENST00000559686 GPHA2Q96T91 129 aa6.39□□□□□ -1.39
SNRPA1-208ENST00000559686 PECRQ9BY49 303 aa6.39□□□□□ -1.39
SNRPA1-208ENST00000559686 FGF20Q9NP95 211 aaPredicted RBP6.39□□□□□ -1.39
SNRPA1-208ENST00000559686 MRPS7Q9Y2R9 242 aaKnown RBP6.39□□□□□ -1.39
SNRPA1-208ENST00000559686 TRBV6-7A0A0A0MS04 114 aa6.38□□□□□ -1.39
SNRPA1-208ENST00000559686 TMEM14DPA8MWL7 114 aa6.38□□□□□ -1.39
SNRPA1-208ENST00000559686 NUPL2O15504 423 aaKnown RBP6.38□□□□□ -1.39
SNRPA1-208ENST00000559686 ALPLP05186 524 aa6.38□□□□□ -1.39
SNRPA1-208ENST00000559686 HLA-GP17693 338 aa6.38□□□□□ -1.39
SNRPA1-208ENST00000559686 MYL12AP19105 171 aa6.38□□□□□ -1.39
SNRPA1-208ENST00000559686 MAS1LP35410 378 aa6.38□□□□□ -1.39
SNRPA1-208ENST00000559686 TMEM50BP56557 158 aa6.38□□□□□ -1.39
SNRPA1-208ENST00000559686 KRTAP10-2P60368 255 aa6.38□□□□□ -1.39
SNRPA1-208ENST00000559686 RAB14P61106 215 aa6.38□□□□□ -1.39
SNRPA1-208ENST00000559686 RPL8P62917 257 aaKnown RBP6.38□□□□□ -1.39
SNRPA1-208ENST00000559686 COTL1Q14019 142 aa6.38□□□□□ -1.39
SNRPA1-208ENST00000559686 RNF212Q495C1 297 aa6.38□□□□□ -1.39
SNRPA1-208ENST00000559686 DNAL1Q4LDG9 190 aa6.38□□□□□ -1.39
SNRPA1-208ENST00000559686 RBM48Q5RL73 367 aaKnown RBP6.38□□□□□ -1.39
SNRPA1-208ENST00000559686 PUSL1Q8N0Z8 303 aaKnown RBP6.38□□□□□ -1.39
SNRPA1-208ENST00000559686 OR10W1Q8NGF6 305 aa6.38□□□□□ -1.39
SNRPA1-208ENST00000559686 RHOXF1Q8NHV9 184 aa6.38□□□□□ -1.39
SNRPA1-208ENST00000559686 VSTM2AQ8TAG5 236 aa6.38□□□□□ -1.39
SNRPA1-208ENST00000559686 APH1BQ8WW43 257 aa6.38□□□□□ -1.39
SNRPA1-208ENST00000559686 SAT2Q96F10 170 aaPredicted RBP6.38□□□□□ -1.39
SNRPA1-208ENST00000559686 CENPNQ96H22 339 aaPredicted RBP6.38□□□□□ -1.39
SNRPA1-208ENST00000559686 URM1Q9BTM9 101 aaKnown RBP6.38□□□□□ -1.39
SNRPA1-208ENST00000559686 HRASLSQ9HDD0 168 aa6.38□□□□□ -1.39
SNRPA1-208ENST00000559686 TMEM14BQ9NUH8 114 aa6.38□□□□□ -1.39
SNRPA1-208ENST00000559686 THYN1Q9P016 225 aa6.38□□□□□ -1.39
SNRPA1-208ENST00000559686 RABAC1Q9UI14 185 aa6.38□□□□□ -1.39
SNRPA1-208ENST00000559686 SPATA2Q9UM82 520 aa6.38□□□□□ -1.39
SNRPA1-208ENST00000559686 PRELID3BQ9Y3B1 194 aa6.38□□□□□ -1.39
SNRPA1-208ENST00000559686 TMED3Q9Y3Q3 217 aa6.38□□□□□ -1.39
SNRPA1-208ENST00000559686 A0A075B6Q4 140 aa6.37□□□□□ -1.39
SNRPA1-208ENST00000559686 IGLC7A0M8Q6 106 aa6.37□□□□□ -1.39
SNRPA1-208ENST00000559686 C15orf62A8K5M9 175 aa6.37□□□□□ -1.39
SNRPA1-208ENST00000559686 ST8SIA3O43173 380 aa6.37□□□□□ -1.39
SNRPA1-208ENST00000559686 SNAPINO95295 136 aa6.37□□□□□ -1.39
SNRPA1-208ENST00000559686 FCGR3AP08637 254 aa6.37□□□□□ -1.39
SNRPA1-208ENST00000559686 FCGR1AP12314 374 aa6.37□□□□□ -1.39
SNRPA1-208ENST00000559686 FUSP35637 526 aaKnown RBP eCLIP6.37□□□□□ -1.39
SNRPA1-208ENST00000559686 TSPAN5P62079 268 aa6.37□□□□□ -1.39
SNRPA1-208ENST00000559686 QRFPP83859 136 aa6.37□□□□□ -1.39
SNRPA1-208ENST00000559686 Q5VSD8 79 aa6.37□□□□□ -1.39
SNRPA1-208ENST00000559686 LIPKQ5VXJ0 399 aa6.37□□□□□ -1.39
SNRPA1-208ENST00000559686 FAM90A2PQ658T7 463 aa6.37□□□□□ -1.39
SNRPA1-208ENST00000559686 DGAT2L7PQ6IED9 249 aa6.37□□□□□ -1.39
SNRPA1-208ENST00000559686 Q6ZNX1 250 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms