RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 AKAIN1P0CW23 69 aa9.13□□□□□ -0.95
TPM1-216ENST00000558910 HIST1H1BP16401 226 aaKnown RBP9.13□□□□□ -0.95
TPM1-216ENST00000558910 TNFSF8P32971 234 aa9.13□□□□□ -0.95
TPM1-216ENST00000558910 UCP3P55916 312 aa9.13□□□□□ -0.95
TPM1-216ENST00000558910 GUCA2BQ16661 112 aa9.13□□□□□ -0.95
TPM1-216ENST00000558910 PYDC2Q56P42 97 aa9.13□□□□□ -0.95
TPM1-216ENST00000558910 LHFPL1Q86WI0 220 aa9.13□□□□□ -0.95
TPM1-216ENST00000558910 ARRDC1Q8N5I2 433 aa9.13□□□□□ -0.95
TPM1-216ENST00000558910 OR4C16Q8NGL9 310 aa9.13□□□□□ -0.95
TPM1-216ENST00000558910 TERB2Q8NHR7 220 aa9.13□□□□□ -0.95
TPM1-216ENST00000558910 ZFAND1Q8TCF1 268 aa9.13□□□□□ -0.95
TPM1-216ENST00000558910 SMIM4Q8WVI0 70 aa9.13□□□□□ -0.95
TPM1-216ENST00000558910 LSM10Q969L4 123 aaKnown RBP9.13□□□□□ -0.95
TPM1-216ENST00000558910 SEC22AQ96IW7 307 aa9.13□□□□□ -0.95
TPM1-216ENST00000558910 SLIRPQ9GZT3 109 aaKnown RBP9.13□□□□□ -0.95
TPM1-216ENST00000558910 NDUFA4L2Q9NRX3 87 aa9.13□□□□□ -0.95
TPM1-216ENST00000558910 PRR13Q9NZ81 148 aa9.13□□□□□ -0.95
TPM1-216ENST00000558910 PEMTQ9UBM1 199 aa9.13□□□□□ -0.95
TPM1-216ENST00000558910 PRNDQ9UKY0 176 aa9.13□□□□□ -0.95
TPM1-216ENST00000558910 C14orf166Q9Y224 244 aaKnown RBP9.13□□□□□ -0.95
TPM1-216ENST00000558910 NBEAL2Q6ZNJ1 2754 aa9.12□□□□□ -0.95
TPM1-216ENST00000558910 TEX13DA0A0J9YY54 714 aaPredicted RBP9.12□□□□□ -0.95
TPM1-216ENST00000558910 C15orf61A6NNL5 157 aa9.12□□□□□ -0.95
TPM1-216ENST00000558910 ZNF207O43670 478 aaKnown RBP9.12□□□□□ -0.95
TPM1-216ENST00000558910 NXPH3O95157 252 aa9.12□□□□□ -0.95
TPM1-216ENST00000558910 CD74P04233 296 aa9.12□□□□□ -0.95
TPM1-216ENST00000558910 MFAP2P55001 183 aa9.12□□□□□ -0.95
TPM1-216ENST00000558910 DCTN2Q13561 401 aaKnown RBP9.12□□□□□ -0.95
TPM1-216ENST00000558910 TM4SF20Q53R12 229 aa9.12□□□□□ -0.95
TPM1-216ENST00000558910 Q56UQ5 140 aa9.12□□□□□ -0.95
TPM1-216ENST00000558910 PLET1Q6UQ28 207 aa9.12□□□□□ -0.95
TPM1-216ENST00000558910 GDPD1Q8N9F7 314 aa9.12□□□□□ -0.95
TPM1-216ENST00000558910 CCDC71LQ8N9Z2 235 aa9.12□□□□□ -0.95
TPM1-216ENST00000558910 OR51S1Q8NGJ8 323 aa9.12□□□□□ -0.95
TPM1-216ENST00000558910 PINX1Q96BK5 328 aaKnown RBP9.12□□□□□ -0.95
TPM1-216ENST00000558910 TMEM56Q96MV1 263 aa9.12□□□□□ -0.95
TPM1-216ENST00000558910 TSC22D3Q99576 134 aa9.12□□□□□ -0.95
TPM1-216ENST00000558910 HUWE1Q7Z6Z7 4374 aaKnown RBP9.11□□□□□ -0.95
TPM1-216ENST00000558910 H0Y980 276 aa9.11□□□□□ -0.95
TPM1-216ENST00000558910 IFNA17P01571 189 aa9.11□□□□□ -0.95
TPM1-216ENST00000558910 IGKV1-5P01602 117 aa9.11□□□□□ -0.95
TPM1-216ENST00000558910 OR5AC1P0C628 307 aa9.11□□□□□ -0.95
TPM1-216ENST00000558910 FRMD6-AS1P0C7T7 363 aa9.11□□□□□ -0.95
TPM1-216ENST00000558910 FOLR2P14207 255 aa9.11□□□□□ -0.95
TPM1-216ENST00000558910 TBPP20226 339 aa9.11□□□□□ -0.95
TPM1-216ENST00000558910 MRPS10P82664 201 aaKnown RBP9.11□□□□□ -0.95
TPM1-216ENST00000558910 MEF2DQ14814 521 aa9.11□□□□□ -0.95
TPM1-216ENST00000558910 CD300EQ496F6 205 aaPredicted RBP9.11□□□□□ -0.95
TPM1-216ENST00000558910 FAM106AQ4KMX7 169 aa9.11□□□□□ -0.95
TPM1-216ENST00000558910 ADAMTSL5Q6ZMM2 481 aa9.11□□□□□ -0.95
TPM1-216ENST00000558910 SBSPONQ8IVN8 264 aa9.11□□□□□ -0.95
TPM1-216ENST00000558910 CXorf58Q96LI9 332 aa9.11□□□□□ -0.95
TPM1-216ENST00000558910 BCL7BQ9BQE9 202 aa9.11□□□□□ -0.95
TPM1-216ENST00000558910 C20orf24Q9BUV8 137 aa9.11□□□□□ -0.95
TPM1-216ENST00000558910 FKBP11Q9NYL4 201 aa9.11□□□□□ -0.95
TPM1-216ENST00000558910 THYN1Q9P016 225 aa9.11□□□□□ -0.95
TPM1-216ENST00000558910 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.11□□□□□ -0.95
TPM1-216ENST00000558910 A0A0G2JRQ6 117 aa9.1□□□□□ -0.95
TPM1-216ENST00000558910 C2orf70A6NJV1 201 aa9.1□□□□□ -0.95
TPM1-216ENST00000558910 SCAF4O95104 1147 aaKnown RBP9.1□□□□□ -0.95
TPM1-216ENST00000558910 CTSDP07339 412 aaPredicted RBP9.1□□□□□ -0.95
TPM1-216ENST00000558910 IGHV4-30-4P0DP06 118 aa9.1□□□□□ -0.95
TPM1-216ENST00000558910 HOXA1P49639 335 aaPredicted RBP9.1□□□□□ -0.95
TPM1-216ENST00000558910 RND3P61587 244 aa9.1□□□□□ -0.95
TPM1-216ENST00000558910 UNQ9165/PRO28630Q6UXU0 137 aa9.1□□□□□ -0.95
TPM1-216ENST00000558910 SGPP2Q8IWX5 399 aa9.1□□□□□ -0.95
TPM1-216ENST00000558910 SLC35G3Q8N808 338 aa9.1□□□□□ -0.95
TPM1-216ENST00000558910 ZNF502Q8TBZ5 544 aa9.1□□□□□ -0.95
TPM1-216ENST00000558910 RRNAD1Q96FB5 475 aaKnown RBP9.1□□□□□ -0.95
TPM1-216ENST00000558910 ZNF486Q96H40 463 aaPredicted RBP9.1□□□□□ -0.95
TPM1-216ENST00000558910 RTBDNQ9BSG5 229 aaPredicted RBP9.1□□□□□ -0.95
TPM1-216ENST00000558910 THAP7Q9BT49 309 aaPredicted RBP9.1□□□□□ -0.95
TPM1-216ENST00000558910 TUBA4BQ9H853 241 aa9.1□□□□□ -0.95
TPM1-216ENST00000558910 PLEKHA3Q9HB20 300 aa9.1□□□□□ -0.95
TPM1-216ENST00000558910 TMEM14BQ9NUH8 114 aa9.1□□□□□ -0.95
TPM1-216ENST00000558910 RSL24D1Q9UHA3 163 aaKnown RBP9.1□□□□□ -0.95
TPM1-216ENST00000558910 F11RQ9Y624 299 aaKnown RBP9.1□□□□□ -0.95
TPM1-216ENST00000558910 TRBV7-1A0A0A6YYK4 115 aa9.09□□□□□ -0.95
TPM1-216ENST00000558910 LINC00854A0A1B0GVQ3 168 aa9.09□□□□□ -0.95
TPM1-216ENST00000558910 H3BS24 57 aa9.09□□□□□ -0.95
TPM1-216ENST00000558910 CYB5BO43169 146 aa9.09□□□□□ -0.95
TPM1-216ENST00000558910 ST8SIA3O43173 380 aa9.09□□□□□ -0.95
TPM1-216ENST00000558910 TGOLN2O43493 480 aa9.09□□□□□ -0.95
TPM1-216ENST00000558910 AKR1C4P17516 323 aa9.09□□□□□ -0.95
TPM1-216ENST00000558910 S100A5P33763 92 aa9.09□□□□□ -0.95
TPM1-216ENST00000558910 ETV6P41212 452 aa9.09□□□□□ -0.95
TPM1-216ENST00000558910 CD81P60033 236 aa9.09□□□□□ -0.95
TPM1-216ENST00000558910 HSPE1P61604 102 aaKnown RBP9.09□□□□□ -0.95
TPM1-216ENST00000558910 LCN12Q6JVE5 192 aa9.09□□□□□ -0.95
TPM1-216ENST00000558910 BTNL8Q6UX41 500 aa9.09□□□□□ -0.95
TPM1-216ENST00000558910 GTSCR1Q86UQ5 136 aa9.09□□□□□ -0.95
TPM1-216ENST00000558910 UXS1Q8NBZ7 420 aa9.09□□□□□ -0.95
TPM1-216ENST00000558910 OR5B3Q8NH48 314 aa9.09□□□□□ -0.95
TPM1-216ENST00000558910 SCARB1Q8WTV0 552 aa9.09□□□□□ -0.95
TPM1-216ENST00000558910 CHRDL1Q9BU40 450 aa9.09□□□□□ -0.95
TPM1-216ENST00000558910 PDCD10Q9BUL8 212 aa9.09□□□□□ -0.95
TPM1-216ENST00000558910 WFDC10AQ9H1F0 79 aa9.09□□□□□ -0.95
TPM1-216ENST00000558910 C5orf66Q9H5L9 145 aa9.09□□□□□ -0.95
TPM1-216ENST00000558910 NAA60Q9H7X0 242 aa9.09□□□□□ -0.95
TPM1-216ENST00000558910 C21orf62Q9NYP8 219 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms