RNA–Protein interactions for RNA: ENST00000558771.1

LRRC28-208, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-208ENST00000558771 SCRT2Q9NQ03 307 aa3.91□□□□□ -1.78
LRRC28-208ENST00000558771 CELA1Q9UNI1 258 aa3.91□□□□□ -1.78
LRRC28-208ENST00000558771 ETV7Q9Y603 341 aa3.91□□□□□ -1.78
LRRC28-208ENST00000558771 FAT1Q14517 4588 aa3.91□□□□□ -1.78
LRRC28-208ENST00000558771 IRGMA1A4Y4 181 aa3.9□□□□□ -1.79
LRRC28-208ENST00000558771 K7EMT4 169 aa3.9□□□□□ -1.79
LRRC28-208ENST00000558771 CHEK1O14757 476 aa3.9□□□□□ -1.79
LRRC28-208ENST00000558771 DIRAS3O95661 229 aa3.9□□□□□ -1.79
LRRC28-208ENST00000558771 IFNA10P01566 189 aa3.9□□□□□ -1.79
LRRC28-208ENST00000558771 CDK1P06493 297 aa3.9□□□□□ -1.79
LRRC28-208ENST00000558771 FCGR3AP08637 254 aa3.9□□□□□ -1.79
LRRC28-208ENST00000558771 GIG44P09565 113 aaPredicted RBP3.9□□□□□ -1.79
LRRC28-208ENST00000558771 CD37P11049 281 aa3.9□□□□□ -1.79
LRRC28-208ENST00000558771 MIFP14174 115 aa3.9□□□□□ -1.79
LRRC28-208ENST00000558771 CRHBPP24387 322 aa3.9□□□□□ -1.79
LRRC28-208ENST00000558771 TIRAPP58753 221 aa3.9□□□□□ -1.79
LRRC28-208ENST00000558771 RPL8P62917 257 aaKnown RBP3.9□□□□□ -1.79
LRRC28-208ENST00000558771 P2RY14Q15391 338 aa3.9□□□□□ -1.79
LRRC28-208ENST00000558771 C12orf74Q32Q52 190 aa3.9□□□□□ -1.79
LRRC28-208ENST00000558771 SOHLH1Q5JUK2 328 aa3.9□□□□□ -1.79
LRRC28-208ENST00000558771 C1orf134Q5TEV5 83 aa3.9□□□□□ -1.79
LRRC28-208ENST00000558771 LEMD1Q68G75 181 aa3.9□□□□□ -1.79
LRRC28-208ENST00000558771 H1FOOQ8IZA3 346 aaPredicted RBP3.9□□□□□ -1.79
LRRC28-208ENST00000558771 CENPSQ8N2Z9 138 aa3.9□□□□□ -1.79
LRRC28-208ENST00000558771 GBGT1Q8N5D6 347 aa3.9□□□□□ -1.79
LRRC28-208ENST00000558771 BSCL2Q96G97 398 aaPredicted RBP3.9□□□□□ -1.79
LRRC28-208ENST00000558771 TMEM80Q96HE8 168 aa3.9□□□□□ -1.79
LRRC28-208ENST00000558771 RHPN1-AS1Q9BWJ2 59 aa3.9□□□□□ -1.79
LRRC28-208ENST00000558771 THYN1Q9P016 225 aa3.9□□□□□ -1.79
LRRC28-208ENST00000558771 SMPXQ9UHP9 88 aa3.9□□□□□ -1.79
LRRC28-208ENST00000558771 MRPS7Q9Y2R9 242 aaKnown RBP3.9□□□□□ -1.79
LRRC28-208ENST00000558771 KCNK7Q9Y2U2 307 aa3.9□□□□□ -1.79
LRRC28-208ENST00000558771 PRELID3BQ9Y3B1 194 aa3.9□□□□□ -1.79
LRRC28-208ENST00000558771 AGRNO00468 2067 aa3.9□□□□□ -1.79
LRRC28-208ENST00000558771 IGHV3-49A0A0A0MS15 119 aa3.89□□□□□ -1.79
LRRC28-208ENST00000558771 IGHV3-21A0A0B4J1V1 117 aa3.89□□□□□ -1.79
LRRC28-208ENST00000558771 IGHV7-4-1A0A0J9YVY3 117 aa3.89□□□□□ -1.79
LRRC28-208ENST00000558771 IGLC7A0M8Q6 106 aa3.89□□□□□ -1.79
LRRC28-208ENST00000558771 EFCAB10A6NFE3 127 aa3.89□□□□□ -1.79
LRRC28-208ENST00000558771 C15orf62A8K5M9 175 aa3.89□□□□□ -1.79
LRRC28-208ENST00000558771 ZNF705EA8MWA4 302 aaPredicted RBP3.89□□□□□ -1.79
LRRC28-208ENST00000558771 ATP8B1O43520 1251 aa3.89□□□□□ -1.79
LRRC28-208ENST00000558771 IFNA21P01568 189 aa3.89□□□□□ -1.79
LRRC28-208ENST00000558771 IFNA17P01571 189 aa3.89□□□□□ -1.79
LRRC28-208ENST00000558771 CD74P04233 296 aa3.89□□□□□ -1.79
LRRC28-208ENST00000558771 HLA-GP17693 338 aa3.89□□□□□ -1.79
LRRC28-208ENST00000558771 CLDN12P56749 244 aa3.89□□□□□ -1.79
LRRC28-208ENST00000558771 BRWD1-AS2P59051 145 aa3.89□□□□□ -1.79
LRRC28-208ENST00000558771 DEFB131AP59861 70 aa3.89□□□□□ -1.79
LRRC28-208ENST00000558771 OR2B8PP59922 312 aa3.89□□□□□ -1.79
LRRC28-208ENST00000558771 SUMO2P61956 95 aaKnown RBP3.89□□□□□ -1.79
LRRC28-208ENST00000558771 MRPS15P82914 257 aaKnown RBP3.89□□□□□ -1.79
LRRC28-208ENST00000558771 PLA2G7Q13093 441 aa3.89□□□□□ -1.79
LRRC28-208ENST00000558771 ACSM3Q53FZ2 586 aa3.89□□□□□ -1.79
LRRC28-208ENST00000558771 FAM90A2PQ658T7 463 aa3.89□□□□□ -1.79
LRRC28-208ENST00000558771 SPSB3Q6PJ21 355 aa3.89□□□□□ -1.79
LRRC28-208ENST00000558771 UBE2DNLQ8IWF7 75 aa3.89□□□□□ -1.79
LRRC28-208ENST00000558771 STHQ8IWL8 128 aa3.89□□□□□ -1.79
LRRC28-208ENST00000558771 TMEM116Q8NCL8 245 aa3.89□□□□□ -1.79
LRRC28-208ENST00000558771 OR56B1Q8NGI3 324 aa3.89□□□□□ -1.79
LRRC28-208ENST00000558771 OR4S2Q8NH73 311 aa3.89□□□□□ -1.79
LRRC28-208ENST00000558771 VN1R17PQ8TDU5 208 aa3.89□□□□□ -1.79
LRRC28-208ENST00000558771 SCARB1Q8WTV0 552 aa3.89□□□□□ -1.79
LRRC28-208ENST00000558771 PHYHIPQ92561 330 aa3.89□□□□□ -1.79
LRRC28-208ENST00000558771 ZNF414Q96IQ9 312 aa3.89□□□□□ -1.79
LRRC28-208ENST00000558771 GFI1Q99684 422 aa3.89□□□□□ -1.79
LRRC28-208ENST00000558771 PLGRKTQ9HBL7 147 aa3.89□□□□□ -1.79
LRRC28-208ENST00000558771 RBMX2Q9Y388 322 aaKnown RBP3.89□□□□□ -1.79
LRRC28-208ENST00000558771 MYCBP2O75592 4640 aa3.89□□□□□ -1.79
LRRC28-208ENST00000558771 NACAE9PAV3 2078 aa3.89□□□□□ -1.79
LRRC28-208ENST00000558771 IGHV3OR16-13A0A075B7E8 117 aa3.88□□□□□ -1.79
LRRC28-208ENST00000558771 IGKV1D-8A0A087WSZ0 117 aa3.88□□□□□ -1.79
LRRC28-208ENST00000558771 IGHV3-74A0A0B4J1X5 117 aa3.88□□□□□ -1.79
LRRC28-208ENST00000558771 TRAV3A0A0B4J244 114 aa3.88□□□□□ -1.79
LRRC28-208ENST00000558771 IGKV1D-13A0A0B4J2D9 117 aa3.88□□□□□ -1.79
LRRC28-208ENST00000558771 SLC17A2O00624 439 aa3.88□□□□□ -1.79
LRRC28-208ENST00000558771 MYL12BO14950 172 aa3.88□□□□□ -1.79
LRRC28-208ENST00000558771 HRASP01112 189 aa3.88□□□□□ -1.79
LRRC28-208ENST00000558771 HLA-DQB1P01920 261 aa3.88□□□□□ -1.79
LRRC28-208ENST00000558771 IGKV1-13P0DP09 117 aa3.88□□□□□ -1.79
LRRC28-208ENST00000558771 GNB3P16520 340 aa3.88□□□□□ -1.79
LRRC28-208ENST00000558771 CD36P16671 472 aa3.88□□□□□ -1.79
LRRC28-208ENST00000558771 C4BPBP20851 252 aa3.88□□□□□ -1.79
LRRC28-208ENST00000558771 NFYAP23511 347 aaPredicted RBP3.88□□□□□ -1.79
LRRC28-208ENST00000558771 WNT4P56705 351 aa3.88□□□□□ -1.79
LRRC28-208ENST00000558771 PAFAH1B2P68402 229 aa3.88□□□□□ -1.79
LRRC28-208ENST00000558771 ST3GAL4Q11206 333 aa3.88□□□□□ -1.79
LRRC28-208ENST00000558771 EIF4EBP1Q13541 118 aaPredicted RBP3.88□□□□□ -1.79
LRRC28-208ENST00000558771 C2orf76Q3KRA6 126 aa3.88□□□□□ -1.79
LRRC28-208ENST00000558771 TIMM50Q3ZCQ8 353 aa3.88□□□□□ -1.79
LRRC28-208ENST00000558771 HSD17B12Q53GQ0 312 aa3.88□□□□□ -1.79
LRRC28-208ENST00000558771 LIPKQ5VXJ0 399 aa3.88□□□□□ -1.79
LRRC28-208ENST00000558771 MORN5Q5VZ52 161 aa3.88□□□□□ -1.79
LRRC28-208ENST00000558771 SLC25A24Q6NUK1 477 aa3.88□□□□□ -1.79
LRRC28-208ENST00000558771 TCF24Q7RTU0 167 aa3.88□□□□□ -1.79
LRRC28-208ENST00000558771 FAM24BQ8N5W8 94 aa3.88□□□□□ -1.79
LRRC28-208ENST00000558771 GDPD1Q8N9F7 314 aa3.88□□□□□ -1.79
LRRC28-208ENST00000558771 UBAC2Q8NBM4 344 aa3.88□□□□□ -1.79
LRRC28-208ENST00000558771 OR10W1Q8NGF6 305 aa3.88□□□□□ -1.79
LRRC28-208ENST00000558771 TCTEX1D2Q8WW35 142 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms