RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 DCUN1D5Q9BTE7 237 aa3.23□□□□□ -1.89
SPG11-211ENST00000558561 MRPS26Q9BYN8 205 aaKnown RBP3.23□□□□□ -1.89
SPG11-211ENST00000558561 SLC5A7Q9GZV3 580 aa3.23□□□□□ -1.89
SPG11-211ENST00000558561 ZNF430Q9H8G1 570 aaPredicted RBP3.23□□□□□ -1.89
SPG11-211ENST00000558561 DIABLOQ9NR28 239 aa3.23□□□□□ -1.89
SPG11-211ENST00000558561 EHFQ9NZC4 300 aa3.23□□□□□ -1.89
SPG11-211ENST00000558561 ANAPC10Q9UM13 185 aa3.23□□□□□ -1.89
SPG11-211ENST00000558561 ETV7Q9Y603 341 aa3.23□□□□□ -1.89
SPG11-211ENST00000558561 IGHV3-21A0A0B4J1V1 117 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 IZUMO1RA6ND01 250 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 H3BMQ9 156 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 BMPR1BO00238 502 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 TXNL1O43396 289 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 S1PR2O95136 353 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 CNIH1O95406 144 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 IGLV2-11P01706 119 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 CD3DP04234 171 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 OR9G9P0C7N8 305 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 AREGP15514 252 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 VDAC1P21796 283 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 HRH1P35367 487 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 LPAR6P43657 344 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 ARHGDIBP52566 201 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 CRIP2P52943 208 aaPredicted RBP3.22□□□□□ -1.89
SPG11-211ENST00000558561 MFAP2P55001 183 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 ARPC4P59998 168 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 MRPS15P82914 257 aaKnown RBP3.22□□□□□ -1.89
SPG11-211ENST00000558561 RPL24P83731 157 aaKnown RBP3.22□□□□□ -1.89
SPG11-211ENST00000558561 CDK10Q15131 360 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 TNXAQ16473 311 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 SP6Q3SY56 376 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 PHLDA2Q53GA4 152 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 ACTBL2Q562R1 376 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 DEFB121Q5J5C9 76 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 TMEM69Q5SWH9 247 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 FAM71F2Q6NXP2 309 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 CFAP161Q6P656 301 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 IL34Q6ZMJ4 242 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 GPR141Q7Z602 305 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 TMEM17Q86X19 198 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 PDPNQ86YL7 162 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 PUSL1Q8N0Z8 303 aaKnown RBP3.22□□□□□ -1.89
SPG11-211ENST00000558561 GBGT1Q8N5D6 347 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 ZNF645Q8N7E2 425 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 DMBX1Q8NFW5 382 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 OR4F17Q8NGA8 305 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 OR8H1Q8NGG4 311 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 OR51H1Q8NH63 302 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 TCTEX1D2Q8WW35 142 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 FCAMRQ8WWV6 532 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 ZNF414Q96IQ9 312 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 OR4F4Q96R69 305 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 ASCL2Q99929 193 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 SOSTQ9BQB4 213 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 NEURL2Q9BR09 285 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 SLIRPQ9GZT3 109 aaKnown RBP3.22□□□□□ -1.89
SPG11-211ENST00000558561 FXYD6Q9H0Q3 95 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 HRH4Q9H3N8 390 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 SDF2L1Q9HCN8 221 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 RAB9BQ9NP90 201 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 ZC4H2Q9NQZ6 224 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 ZNF355PQ9NSJ1 428 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 ZFP57Q9NU63 452 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 EXTL2Q9UBQ6 330 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 MGAT4AQ9UM21 535 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 COL7A1Q02388 2944 aa3.22□□□□□ -1.89
SPG11-211ENST00000558561 A0A087WYN8 130 aa3.21□□□□□ -1.9
SPG11-211ENST00000558561 IGHV3-35A0A0C4DH35 117 aa3.21□□□□□ -1.9
SPG11-211ENST00000558561 A0A0G2JRQ6 117 aa3.21□□□□□ -1.9
SPG11-211ENST00000558561 TEX50A0A1B0GTY4 177 aa3.21□□□□□ -1.9
SPG11-211ENST00000558561 PPP5D1E7EU14 171 aa3.21□□□□□ -1.9
SPG11-211ENST00000558561 UPK2O00526 184 aa3.21□□□□□ -1.9
SPG11-211ENST00000558561 OR2J3O76001 311 aa3.21□□□□□ -1.9
SPG11-211ENST00000558561 KRASP01116 189 aa3.21□□□□□ -1.9
SPG11-211ENST00000558561 IGHV3-48P01763 117 aa3.21□□□□□ -1.9
SPG11-211ENST00000558561 APOA1P02647 267 aa3.21□□□□□ -1.9
SPG11-211ENST00000558561 APOA2P02652 100 aa3.21□□□□□ -1.9
SPG11-211ENST00000558561 TRGV3P03979 118 aa3.21□□□□□ -1.9
SPG11-211ENST00000558561 CTXN2P0C2S0 81 aa3.21□□□□□ -1.9
SPG11-211ENST00000558561 G6PCP35575 357 aa3.21□□□□□ -1.9
SPG11-211ENST00000558561 RPL5P46777 297 aaKnown RBP3.21□□□□□ -1.9
SPG11-211ENST00000558561 LGALS7P47929 136 aa3.21□□□□□ -1.9
SPG11-211ENST00000558561 TPPP2P59282 170 aa3.21□□□□□ -1.9
SPG11-211ENST00000558561 UBE2KP61086 200 aa3.21□□□□□ -1.9
SPG11-211ENST00000558561 SLC35B1P78383 322 aa3.21□□□□□ -1.9
SPG11-211ENST00000558561 PITPNAQ00169 270 aa3.21□□□□□ -1.9
SPG11-211ENST00000558561 TIMM50Q3ZCQ8 353 aa3.21□□□□□ -1.9
SPG11-211ENST00000558561 AKIRIN2Q53H80 203 aa3.21□□□□□ -1.9
SPG11-211ENST00000558561 SPINK9Q5DT21 86 aa3.21□□□□□ -1.9
SPG11-211ENST00000558561 OR4A47Q6IF82 309 aa3.21□□□□□ -1.9
SPG11-211ENST00000558561 GSG1LQ6UXU4 331 aa3.21□□□□□ -1.9
SPG11-211ENST00000558561 KCTD9Q7L273 389 aa3.21□□□□□ -1.9
SPG11-211ENST00000558561 SPAG16Q8N0X2 631 aa3.21□□□□□ -1.9
SPG11-211ENST00000558561 POC5Q8NA72 575 aa3.21□□□□□ -1.9
SPG11-211ENST00000558561 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.21□□□□□ -1.9
SPG11-211ENST00000558561 ADAD2Q8NCV1 583 aaKnown RBP3.21□□□□□ -1.9
SPG11-211ENST00000558561 OR5H2Q8NGV7 314 aa3.21□□□□□ -1.9
SPG11-211ENST00000558561 TMEM167AQ8TBQ9 72 aa3.21□□□□□ -1.9
SPG11-211ENST00000558561 MRAPQ8TCY5 172 aa3.21□□□□□ -1.9
SPG11-211ENST00000558561 SRSF12Q8WXF0 261 aaKnown RBP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms