RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 DEFB135Q30KP9 77 aa11.58□□□□□ -0.56
TPM1-211ENST00000558314 TBC1D26Q86UD7 250 aa11.58□□□□□ -0.56
TPM1-211ENST00000558314 LYSMD2Q8IV50 215 aa11.58□□□□□ -0.56
TPM1-211ENST00000558314 OR5B3Q8NH48 314 aa11.58□□□□□ -0.56
TPM1-211ENST00000558314 OR4A16Q8NH70 328 aa11.58□□□□□ -0.56
TPM1-211ENST00000558314 SPAG8Q99932 426 aaPredicted RBP11.58□□□□□ -0.56
TPM1-211ENST00000558314 C5orf66Q9H5L9 145 aa11.58□□□□□ -0.56
TPM1-211ENST00000558314 A0A087WXM4 84 aa11.57□□□□□ -0.56
TPM1-211ENST00000558314 A0A0J9YWU9 116 aa11.57□□□□□ -0.56
TPM1-211ENST00000558314 NDUFA4O00483 81 aa11.57□□□□□ -0.56
TPM1-211ENST00000558314 CTSDP07339 412 aaPredicted RBP11.57□□□□□ -0.56
TPM1-211ENST00000558314 APOC4P55056 127 aa11.57□□□□□ -0.56
TPM1-211ENST00000558314 SPINK9Q5DT21 86 aa11.57□□□□□ -0.56
TPM1-211ENST00000558314 SPSB3Q6PJ21 355 aa11.57□□□□□ -0.56
TPM1-211ENST00000558314 H2BFWTQ7Z2G1 175 aa11.57□□□□□ -0.56
TPM1-211ENST00000558314 SLC25A46Q96AG3 418 aa11.57□□□□□ -0.56
TPM1-211ENST00000558314 PINX1Q96BK5 328 aaKnown RBP11.57□□□□□ -0.56
TPM1-211ENST00000558314 TSC22D3Q99576 134 aa11.57□□□□□ -0.56
TPM1-211ENST00000558314 FKBP11Q9NYL4 201 aa11.57□□□□□ -0.56
TPM1-211ENST00000558314 ANAPC10Q9UM13 185 aa11.57□□□□□ -0.56
TPM1-211ENST00000558314 LYSTQ99698 3801 aa11.57□□□□□ -0.56
TPM1-211ENST00000558314 IGHV3OR16-13A0A075B7E8 117 aa11.56□□□□□ -0.56
TPM1-211ENST00000558314 IGHV3-74A0A0B4J1X5 117 aa11.56□□□□□ -0.56
TPM1-211ENST00000558314 FAM25AB3EWG3 89 aa11.56□□□□□ -0.56
TPM1-211ENST00000558314 FAM25CB3EWG5 89 aa11.56□□□□□ -0.56
TPM1-211ENST00000558314 FAM25GB3EWG6 89 aa11.56□□□□□ -0.56
TPM1-211ENST00000558314 K7EIM0 57 aa11.56□□□□□ -0.56
TPM1-211ENST00000558314 TSPAN4O14817 238 aa11.56□□□□□ -0.56
TPM1-211ENST00000558314 SPRY2O43597 315 aa11.56□□□□□ -0.56
TPM1-211ENST00000558314 NAT1P18440 290 aa11.56□□□□□ -0.56
TPM1-211ENST00000558314 NCS1P62166 190 aa11.56□□□□□ -0.56
TPM1-211ENST00000558314 EPPK1P58107 5090 aaKnown RBP11.55□□□□□ -0.56
TPM1-211ENST00000558314 OR4C46A6NHA9 309 aa11.55□□□□□ -0.56
TPM1-211ENST00000558314 C15orf61A6NNL5 157 aa11.55□□□□□ -0.56
TPM1-211ENST00000558314 M0QYG6 137 aa11.55□□□□□ -0.56
TPM1-211ENST00000558314 NUPL2O15504 423 aaKnown RBP11.55□□□□□ -0.56
TPM1-211ENST00000558314 FGF2P09038 288 aa11.55□□□□□ -0.56
TPM1-211ENST00000558314 PGAM2P15259 253 aa11.55□□□□□ -0.56
TPM1-211ENST00000558314 ADMP35318 185 aa11.55□□□□□ -0.56
TPM1-211ENST00000558314 VBP1P61758 197 aa11.55□□□□□ -0.56
TPM1-211ENST00000558314 LPCAT3Q6P1A2 487 aa11.55□□□□□ -0.56
TPM1-211ENST00000558314 APRG1Q8IVJ8 170 aa11.55□□□□□ -0.56
TPM1-211ENST00000558314 STPG3Q8N7X2 389 aa11.55□□□□□ -0.56
TPM1-211ENST00000558314 GPX8Q8TED1 209 aa11.55□□□□□ -0.56
TPM1-211ENST00000558314 MRGPRFQ96AM1 343 aa11.55□□□□□ -0.56
TPM1-211ENST00000558314 F8W735 103 aaPredicted RBP11.54□□□□□ -0.56
TPM1-211ENST00000558314 HPGDSO60760 199 aa11.54□□□□□ -0.56
TPM1-211ENST00000558314 TNFAIP8O95379 198 aa11.54□□□□□ -0.56
TPM1-211ENST00000558314 LY6G6CO95867 125 aa11.54□□□□□ -0.56
TPM1-211ENST00000558314 RCVRNP35243 200 aa11.54□□□□□ -0.56
TPM1-211ENST00000558314 IZUMO4Q1ZYL8 232 aa11.54□□□□□ -0.56
TPM1-211ENST00000558314 ODF3L2Q3SX64 289 aa11.54□□□□□ -0.56
TPM1-211ENST00000558314 LYG2Q86SG7 212 aa11.54□□□□□ -0.56
TPM1-211ENST00000558314 GBGT1Q8N5D6 347 aa11.54□□□□□ -0.56
TPM1-211ENST00000558314 OR1P1Q8NH06 330 aa11.54□□□□□ -0.56
TPM1-211ENST00000558314 RNF2Q99496 336 aa11.54□□□□□ -0.56
TPM1-211ENST00000558314 MT-CO2P00403 227 aa11.53□□□□□ -0.56
TPM1-211ENST00000558314 CTSGP08311 255 aa11.53□□□□□ -0.56
TPM1-211ENST00000558314 ELK1P19419 428 aa11.53□□□□□ -0.56
TPM1-211ENST00000558314 PI3P19957 117 aa11.53□□□□□ -0.56
TPM1-211ENST00000558314 MFAP4P55083 255 aa11.53□□□□□ -0.56
TPM1-211ENST00000558314 EWSR1Q01844 656 aaKnown RBP eCLIP11.53□□□□□ -0.56
TPM1-211ENST00000558314 RELQ04864 619 aaPredicted RBP11.53□□□□□ -0.56
TPM1-211ENST00000558314 ZNF124Q15973 351 aa11.53□□□□□ -0.56
TPM1-211ENST00000558314 WFDC3Q8IUB2 231 aa11.53□□□□□ -0.56
TPM1-211ENST00000558314 TMEM116Q8NCL8 245 aa11.53□□□□□ -0.56
TPM1-211ENST00000558314 FUNDC2Q9BWH2 189 aa11.53□□□□□ -0.56
TPM1-211ENST00000558314 RHPN1-AS1Q9BWJ2 59 aa11.53□□□□□ -0.56
TPM1-211ENST00000558314 TMEM14BQ9NUH8 114 aa11.53□□□□□ -0.56
TPM1-211ENST00000558314 SMPXQ9UHP9 88 aa11.53□□□□□ -0.56
TPM1-211ENST00000558314 IGHV7-4-1A0A0J9YVY3 117 aa11.52□□□□□ -0.57
TPM1-211ENST00000558314 C15orf62A8K5M9 175 aa11.52□□□□□ -0.57
TPM1-211ENST00000558314 K7EMT4 169 aa11.52□□□□□ -0.57
TPM1-211ENST00000558314 GNG7O60262 68 aa11.52□□□□□ -0.57
TPM1-211ENST00000558314 IGKV1-39P01597 117 aa11.52□□□□□ -0.57
TPM1-211ENST00000558314 APOA1P02647 267 aa11.52□□□□□ -0.57
TPM1-211ENST00000558314 IGKV1D-39P04432 117 aa11.52□□□□□ -0.57
TPM1-211ENST00000558314 BMI1P35226 326 aa11.52□□□□□ -0.57
TPM1-211ENST00000558314 SEC22AQ96IW7 307 aa11.52□□□□□ -0.57
TPM1-211ENST00000558314 CMTM3Q96MX0 182 aa11.52□□□□□ -0.57
TPM1-211ENST00000558314 C6orf62Q9GZU0 229 aaPredicted RBP11.52□□□□□ -0.57
TPM1-211ENST00000558314 SCPEP1Q9HB40 452 aa11.52□□□□□ -0.57
TPM1-211ENST00000558314 DNAH1Q9P2D7 4330 aa11.52□□□□□ -0.57
TPM1-211ENST00000558314 HYDINQ4G0P3 5121 aa11.51□□□□□ -0.57
TPM1-211ENST00000558314 IGHV3-66A0A0C4DH42 116 aa11.51□□□□□ -0.57
TPM1-211ENST00000558314 CHEK1O14757 476 aa11.51□□□□□ -0.57
TPM1-211ENST00000558314 FCGR2BP31994 310 aaPredicted RBP11.51□□□□□ -0.57
TPM1-211ENST00000558314 AKR1C2P52895 323 aa11.51□□□□□ -0.57
TPM1-211ENST00000558314 ERHP84090 104 aaKnown RBP11.51□□□□□ -0.57
TPM1-211ENST00000558314 PRCDQ00LT1 54 aa11.51□□□□□ -0.57
TPM1-211ENST00000558314 Q6ZWC4 215 aa11.51□□□□□ -0.57
TPM1-211ENST00000558314 SLC35G3Q8N808 338 aa11.51□□□□□ -0.57
TPM1-211ENST00000558314 GALNT14Q96FL9 552 aa11.51□□□□□ -0.57
TPM1-211ENST00000558314 BIRC6Q9NR09 4857 aa11.51□□□□□ -0.57
TPM1-211ENST00000558314 TRAV14DV4A0A0A6YYC5 116 aa11.5□□□□□ -0.57
TPM1-211ENST00000558314 I3L2K1 104 aa11.5□□□□□ -0.57
TPM1-211ENST00000558314 UBE2CO00762 179 aa11.5□□□□□ -0.57
TPM1-211ENST00000558314 IFNA17P01571 189 aa11.5□□□□□ -0.57
TPM1-211ENST00000558314 SNCAP37840 140 aa11.5□□□□□ -0.57
TPM1-211ENST00000558314 RORCP51449 518 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms