RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 SLC25A10Q9UBX3 287 aaPredicted RBP3.1□□□□□ -1.91
ATXN3-248ENST00000558190 PHLDA3Q9Y5J5 127 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 A0A1W2PRE2 83 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 HAPLN4Q86UW8 402 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 PPP1R27Q86WC6 154 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 TRGV5A0A0B4J1U4 118 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 EFNA2O43921 213 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 C3AR1Q16581 482 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 Q96M66 194 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 RNF7Q9UBF6 113 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 SIVA1O15304 175 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 TNFAIP6P98066 277 aaPredicted RBP3.1□□□□□ -1.91
ATXN3-248ENST00000558190 LINC00305Q7Z4B0 112 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 FOXI2Q6ZQN5 318 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 SNED1Q8TER0 1413 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 MESP2Q0VG99 397 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 FAM90A26D6RGX4 464 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 HARBI1Q96MB7 349 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 IGHV3-66A0A0C4DH42 116 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 C9JCJ5 164 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 SRSF7Q16629 238 aaKnown RBP eCLIP3.1□□□□□ -1.91
ATXN3-248ENST00000558190 ZNF764Q96H86 408 aaPredicted RBP3.1□□□□□ -1.91
ATXN3-248ENST00000558190 TM2D1Q9BX74 207 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 RAB1BQ9H0U4 201 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 EFCAB6Q5THR3 1501 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 SPTY2D1-AS1A0A0U1RR47 76 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 RNF183Q96D59 192 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 ZC2HC1AQ96GY0 325 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 K7EP34 96 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 SUPT4H1P63272 117 aaKnown RBP3.1□□□□□ -1.91
ATXN3-248ENST00000558190 FBLN5Q9UBX5 448 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 ZNF638Q14966 1978 aaKnown RBP3.1□□□□□ -1.91
ATXN3-248ENST00000558190 TIMD4Q96H15 378 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 NPCDR1Q9BY65 106 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 TRAV21A0A0B4J279 112 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 IGLL5B9A064 214 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 IGLC1P0CG04 106 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 GFERP55789 205 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 HES7Q9BYE0 225 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 H3BMG7 143 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 MGST3O14880 152 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 QRFPP83859 136 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 LHFPL6Q9Y693 200 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 SRD5A2P31213 254 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 OR9G4Q8NGQ1 327 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 OR10J6PQ8NGY7 276 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 C16orf92Q96LL3 132 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 C1QTNF4Q9BXJ3 329 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 NOTCH2Q04721 2471 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 SETBP1Q9Y6X0 1596 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 SAP30O75446 220 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 HERV-K104P63124 156 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 MDP1Q86V88 176 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 CD24P25063 80 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 LCNL1Q6ZST4 164 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 SIT1Q9Y3P8 196 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 C5orf63A6NC05 138 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 FAM90A27PA6NNH2 459 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 IL15RAQ13261 267 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 TMEM240Q5SV17 173 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 K7EQS6 105 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 ATXN8Q156A1 80 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 ZNF562Q6V9R5 426 aa3.1□□□□□ -1.91
ATXN3-248ENST00000558190 TRAV3A0A0B4J244 114 aa3.09□□□□□ -1.91
ATXN3-248ENST00000558190 TMEM178AQ8NBL3 297 aa3.09□□□□□ -1.91
ATXN3-248ENST00000558190 WDR31Q8NA23 367 aa3.09□□□□□ -1.91
ATXN3-248ENST00000558190 TRAV13-1A0A0B4J241 112 aa3.09□□□□□ -1.91
ATXN3-248ENST00000558190 J3QT63 122 aa3.09□□□□□ -1.91
ATXN3-248ENST00000558190 IGKCP01834 107 aa3.09□□□□□ -1.91
ATXN3-248ENST00000558190 ZNF837Q96EG3 531 aaPredicted RBP3.09□□□□□ -1.91
ATXN3-248ENST00000558190 LMO7DNF2Z398 122 aa3.09□□□□□ -1.91
ATXN3-248ENST00000558190 MMP23AO75900 390 aa3.09□□□□□ -1.91
ATXN3-248ENST00000558190 COL9A1P20849 921 aa3.09□□□□□ -1.91
ATXN3-248ENST00000558190 IGHV3-35A0A0C4DH35 117 aa3.09□□□□□ -1.91
ATXN3-248ENST00000558190 M0R2P5 195 aa3.09□□□□□ -1.91
ATXN3-248ENST00000558190 FAM106CPP0CH98 169 aa3.09□□□□□ -1.91
ATXN3-248ENST00000558190 SLC25A16P16260 332 aa3.09□□□□□ -1.91
ATXN3-248ENST00000558190 SLC25A48Q6ZT89 311 aaKnown RBP3.09□□□□□ -1.91
ATXN3-248ENST00000558190 C3orf56Q8N813 242 aa3.09□□□□□ -1.91
ATXN3-248ENST00000558190 FBXL7Q9UJT9 491 aa3.09□□□□□ -1.91
ATXN3-248ENST00000558190 ZCCHC11Q5TAX3 1644 aaKnown RBP3.09□□□□□ -1.91
ATXN3-248ENST00000558190 A0A0U1RRA0 63 aa3.09□□□□□ -1.91
ATXN3-248ENST00000558190 SP9P0CG40 484 aa3.09□□□□□ -1.91
ATXN3-248ENST00000558190 LINC00205P59089 165 aa3.09□□□□□ -1.91
ATXN3-248ENST00000558190 LYZL1Q6UWQ5 148 aa3.09□□□□□ -1.91
ATXN3-248ENST00000558190 LOXHD1Q8IVV2 1947 aa3.09□□□□□ -1.91
ATXN3-248ENST00000558190 FAM168AQ92567 244 aa3.09□□□□□ -1.91
ATXN3-248ENST00000558190 IGKV1D-13A0A0B4J2D9 117 aa3.09□□□□□ -1.91
ATXN3-248ENST00000558190 IGKV1-9A0A0C4DH69 117 aa3.09□□□□□ -1.91
ATXN3-248ENST00000558190 IGKV1-13P0DP09 117 aa3.09□□□□□ -1.91
ATXN3-248ENST00000558190 OTORQ9NRC9 128 aa3.09□□□□□ -1.91
ATXN3-248ENST00000558190 C1RLQ9NZP8 487 aa3.09□□□□□ -1.91
ATXN3-248ENST00000558190 SPINT1O43278 529 aa3.09□□□□□ -1.91
ATXN3-248ENST00000558190 PPBPP02775 128 aa3.09□□□□□ -1.91
ATXN3-248ENST00000558190 TRAV40A0A0B4J280 105 aa3.09□□□□□ -1.91
ATXN3-248ENST00000558190 C15orf53Q8NAA6 179 aa3.09□□□□□ -1.91
ATXN3-248ENST00000558190 KIR2DL4Q99706 377 aa3.09□□□□□ -1.91
ATXN3-248ENST00000558190 TNFRSF18Q9Y5U5 241 aa3.09□□□□□ -1.91
ATXN3-248ENST00000558190 LMTK2Q8IWU2 1503 aa3.09□□□□□ -1.91
ATXN3-248ENST00000558190 hCG_38984A0A1B0GV85 526 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms