RNA–Protein interactions for RNA: ENST00000557678.1

GPHN-216, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-216ENST00000557678 ZCCHC13Q8WW36 166 aaKnown RBP1.12□□□□□ -2.23
GPHN-216ENST00000557678 SLC7A6Q92536 515 aa1.12□□□□□ -2.23
GPHN-216ENST00000557678 FGF13Q92913 245 aa1.12□□□□□ -2.23
GPHN-216ENST00000557678 MRPS24Q96EL2 167 aaKnown RBP1.12□□□□□ -2.23
GPHN-216ENST00000557678 BOLA2Q9H3K6 86 aa1.12□□□□□ -2.23
GPHN-216ENST00000557678 TRABDQ9H4I3 376 aa1.12□□□□□ -2.23
GPHN-216ENST00000557678 TUBA4BQ9H853 241 aa1.12□□□□□ -2.23
GPHN-216ENST00000557678 BIN3Q9NQY0 253 aa1.12□□□□□ -2.23
GPHN-216ENST00000557678 CISHQ9NSE2 258 aa1.12□□□□□ -2.23
GPHN-216ENST00000557678 GID8Q9NWU2 228 aa1.12□□□□□ -2.23
GPHN-216ENST00000557678 TVP23BQ9NYZ1 205 aa1.12□□□□□ -2.23
GPHN-216ENST00000557678 TIMM9Q9Y5J7 89 aa1.12□□□□□ -2.23
GPHN-216ENST00000557678 FMN1Q68DA7 1419 aa1.12□□□□□ -2.23
GPHN-216ENST00000557678 YTHDC2Q9H6S0 1430 aaKnown RBP1.12□□□□□ -2.23
GPHN-216ENST00000557678 ZNF407Q9C0G0 2248 aa1.12□□□□□ -2.23
GPHN-216ENST00000557678 HECW2Q9P2P5 1572 aa1.12□□□□□ -2.23
GPHN-216ENST00000557678 MYH11P35749 1972 aa1.12□□□□□ -2.23
GPHN-216ENST00000557678 SHANK3Q9BYB0 1731 aa1.12□□□□□ -2.23
GPHN-216ENST00000557678 PLXNB1O43157 2135 aa1.12□□□□□ -2.23
GPHN-216ENST00000557678 ZCCHC11Q5TAX3 1644 aaKnown RBP1.11□□□□□ -2.23
GPHN-216ENST00000557678 ROBO3Q96MS0 1386 aa1.11□□□□□ -2.23
GPHN-216ENST00000557678 PBRM1Q86U86 1689 aa1.11□□□□□ -2.23
GPHN-216ENST00000557678 TRBV19A0A075B6N1 114 aa1.11□□□□□ -2.23
GPHN-216ENST00000557678 TRAV38-1A0A0B4J264 116 aa1.11□□□□□ -2.23
GPHN-216ENST00000557678 A0A0J9YX75 114 aa1.11□□□□□ -2.23
GPHN-216ENST00000557678 A0A1B0GV72 72 aa1.11□□□□□ -2.23
GPHN-216ENST00000557678 GGT3PA6NGU5 568 aa1.11□□□□□ -2.23
GPHN-216ENST00000557678 E7EQL1 145 aa1.11□□□□□ -2.23
GPHN-216ENST00000557678 G3V2T6 193 aa1.11□□□□□ -2.23
GPHN-216ENST00000557678 C19orf84I3L1E1 186 aa1.11□□□□□ -2.23
GPHN-216ENST00000557678 SLC22A1O15245 554 aa1.11□□□□□ -2.23
GPHN-216ENST00000557678 HMGB3O15347 200 aaKnown RBP1.11□□□□□ -2.23
GPHN-216ENST00000557678 PFDN1O60925 122 aa1.11□□□□□ -2.23
GPHN-216ENST00000557678 IFNA7P01567 189 aa1.11□□□□□ -2.23
GPHN-216ENST00000557678 IGHV3-7P01780 117 aa1.11□□□□□ -2.23
GPHN-216ENST00000557678 FABP1P07148 127 aa1.11□□□□□ -2.23
GPHN-216ENST00000557678 CTSGP08311 255 aa1.11□□□□□ -2.23
GPHN-216ENST00000557678 OR4E1P0C645 316 aa1.11□□□□□ -2.23
GPHN-216ENST00000557678 ZNF728P0DKX0 622 aa1.11□□□□□ -2.23
GPHN-216ENST00000557678 SPI1P17947 270 aa1.11□□□□□ -2.23
GPHN-216ENST00000557678 GZMHP20718 246 aa1.11□□□□□ -2.23
GPHN-216ENST00000557678 MSNP26038 577 aaKnown RBP1.11□□□□□ -2.23
GPHN-216ENST00000557678 S100A4P26447 101 aaKnown RBP1.11□□□□□ -2.23
GPHN-216ENST00000557678 G0S2P27469 103 aa1.11□□□□□ -2.23
GPHN-216ENST00000557678 TPI1P60174 286 aa1.11□□□□□ -2.23
GPHN-216ENST00000557678 RPS20P60866 119 aaKnown RBP1.11□□□□□ -2.23
GPHN-216ENST00000557678 YPEL3P61236 119 aaPredicted RBP1.11□□□□□ -2.23
GPHN-216ENST00000557678 RPL18Q07020 188 aaKnown RBP1.11□□□□□ -2.23
GPHN-216ENST00000557678 MOGQ16653 247 aa1.11□□□□□ -2.23
GPHN-216ENST00000557678 NDUFA5Q16718 116 aa1.11□□□□□ -2.23
GPHN-216ENST00000557678 AKR1C8PQ5T2L2 129 aa1.11□□□□□ -2.23
GPHN-216ENST00000557678 LYRM7Q5U5X0 104 aa1.11□□□□□ -2.23
GPHN-216ENST00000557678 ZNF705AQ6ZN79 300 aaPredicted RBP1.11□□□□□ -2.23
GPHN-216ENST00000557678 GOLT1AQ6ZVE7 132 aa1.11□□□□□ -2.23
GPHN-216ENST00000557678 SLC35E3Q7Z769 313 aa1.11□□□□□ -2.23
GPHN-216ENST00000557678 TRAPPC6BQ86SZ2 158 aa1.11□□□□□ -2.23
GPHN-216ENST00000557678 MSRB3Q8IXL7 192 aa1.11□□□□□ -2.23
GPHN-216ENST00000557678 DYNAPQ8N1N2 210 aa1.11□□□□□ -2.23
GPHN-216ENST00000557678 NEK7Q8TDX7 302 aa1.11□□□□□ -2.23
GPHN-216ENST00000557678 KLK6Q92876 244 aa1.11□□□□□ -2.23
GPHN-216ENST00000557678 ERMAPQ96PL5 475 aaPredicted RBP1.11□□□□□ -2.23
GPHN-216ENST00000557678 DERL1Q9BUN8 251 aa1.11□□□□□ -2.23
GPHN-216ENST00000557678 ZNF471Q9BX82 626 aaPredicted RBP1.11□□□□□ -2.23
GPHN-216ENST00000557678 C11orf68Q9H3H3 251 aaKnown RBP1.11□□□□□ -2.23
GPHN-216ENST00000557678 C16orf95Q9H693 158 aa1.11□□□□□ -2.23
GPHN-216ENST00000557678 LYRM2Q9NU23 88 aaPredicted RBP1.11□□□□□ -2.23
GPHN-216ENST00000557678 UQCC1Q9NVA1 299 aa1.11□□□□□ -2.23
GPHN-216ENST00000557678 NDUFB11Q9NX14 153 aa1.11□□□□□ -2.23
GPHN-216ENST00000557678 GREB1Q4ZG55 1949 aa1.11□□□□□ -2.23
GPHN-216ENST00000557678 ARHGAP32A7KAX9 2087 aa1.11□□□□□ -2.23
GPHN-216ENST00000557678 SCN10AQ9Y5Y9 1956 aa1.1□□□□□ -2.23
GPHN-216ENST00000557678 ECM29Q5VYK3 1845 aa1.1□□□□□ -2.23
GPHN-216ENST00000557678 TOPBP1Q92547 1522 aa1.1□□□□□ -2.23
GPHN-216ENST00000557678 MYO9BQ13459 2157 aa1.1□□□□□ -2.23
GPHN-216ENST00000557678 FBN3Q75N90 2809 aa1.1□□□□□ -2.23
GPHN-216ENST00000557678 MIA2Q96PC5 1412 aa1.1□□□□□ -2.23
GPHN-216ENST00000557678 IGLV10-54A0A075B6I4 117 aa1.1□□□□□ -2.23
GPHN-216ENST00000557678 VPS37CA5D8V6 355 aaPredicted RBP1.1□□□□□ -2.23
GPHN-216ENST00000557678 TRAPPC13A5PLN9 417 aa1.1□□□□□ -2.23
GPHN-216ENST00000557678 C11orf86A6NJI1 115 aa1.1□□□□□ -2.23
GPHN-216ENST00000557678 ODF3BA8MYP8 253 aa1.1□□□□□ -2.23
GPHN-216ENST00000557678 PPP5D1E7EU14 171 aa1.1□□□□□ -2.23
GPHN-216ENST00000557678 PGRMC1O00264 195 aaKnown RBP1.1□□□□□ -2.23
GPHN-216ENST00000557678 NDUFC2O95298 119 aa1.1□□□□□ -2.23
GPHN-216ENST00000557678 IGKV1-5P01602 117 aa1.1□□□□□ -2.23
GPHN-216ENST00000557678 APOA2P02652 100 aa1.1□□□□□ -2.23
GPHN-216ENST00000557678 BPGMP07738 259 aa1.1□□□□□ -2.23
GPHN-216ENST00000557678 HLA-DMBP28068 263 aa1.1□□□□□ -2.23
GPHN-216ENST00000557678 CASP1P29466 404 aa1.1□□□□□ -2.23
GPHN-216ENST00000557678 SERPINB1P30740 379 aa1.1□□□□□ -2.23
GPHN-216ENST00000557678 GABRA4P48169 554 aa1.1□□□□□ -2.23
GPHN-216ENST00000557678 HINT1P49773 126 aaPredicted RBP1.1□□□□□ -2.23
GPHN-216ENST00000557678 GNG3P63215 75 aa1.1□□□□□ -2.23
GPHN-216ENST00000557678 ZNF90Q03938 601 aa1.1□□□□□ -2.23
GPHN-216ENST00000557678 KRTAP6-3Q3LI67 103 aa1.1□□□□□ -2.23
GPHN-216ENST00000557678 SCGB2B2Q4G0G5 96 aa1.1□□□□□ -2.23
GPHN-216ENST00000557678 C3orf33Q6P1S2 294 aa1.1□□□□□ -2.23
GPHN-216ENST00000557678 Q6Q795 121 aa1.1□□□□□ -2.23
GPHN-216ENST00000557678 AGTRAPQ6RW13 159 aa1.1□□□□□ -2.23
GPHN-216ENST00000557678 RPP25LQ8N5L8 163 aaKnown RBP1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms