RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 DNAH10OSP0CZ25 163 aa8.66□□□□□ -1.02
PSEN1-220ENST00000557037 GABRB1P18505 474 aa8.66□□□□□ -1.02
PSEN1-220ENST00000557037 GCSHP23434 173 aa8.66□□□□□ -1.02
PSEN1-220ENST00000557037 ERVFC1-1P60608 527 aa8.66□□□□□ -1.02
PSEN1-220ENST00000557037 ZIK1Q3SY52 487 aaPredicted RBP8.66□□□□□ -1.02
PSEN1-220ENST00000557037 PLAC9Q5JTB6 97 aa8.66□□□□□ -1.02
PSEN1-220ENST00000557037 ZNF773Q6PK81 442 aa8.66□□□□□ -1.02
PSEN1-220ENST00000557037 DEFB104AQ8WTQ1 72 aa8.66□□□□□ -1.02
PSEN1-220ENST00000557037 HINT2Q9BX68 163 aa8.66□□□□□ -1.02
PSEN1-220ENST00000557037 NXF2Q9GZY0 626 aaKnown RBP8.66□□□□□ -1.02
PSEN1-220ENST00000557037 BET1LQ9NYM9 111 aa8.66□□□□□ -1.02
PSEN1-220ENST00000557037 LOC102723971A0A1B0GUV8 181 aa8.65□□□□□ -1.02
PSEN1-220ENST00000557037 UPK2O00526 184 aa8.65□□□□□ -1.02
PSEN1-220ENST00000557037 PLA2G1BP04054 148 aaKnown RBP8.65□□□□□ -1.02
PSEN1-220ENST00000557037 FCGR3AP08637 254 aa8.65□□□□□ -1.02
PSEN1-220ENST00000557037 CD37P11049 281 aa8.65□□□□□ -1.02
PSEN1-220ENST00000557037 CD36P16671 472 aa8.65□□□□□ -1.02
PSEN1-220ENST00000557037 DCKP27707 260 aa8.65□□□□□ -1.02
PSEN1-220ENST00000557037 GNRHRP30968 328 aa8.65□□□□□ -1.02
PSEN1-220ENST00000557037 P2RY14Q15391 338 aa8.65□□□□□ -1.02
PSEN1-220ENST00000557037 C1orf100Q5SVJ3 147 aa8.65□□□□□ -1.02
PSEN1-220ENST00000557037 TTC23Q5W5X9 447 aa8.65□□□□□ -1.02
PSEN1-220ENST00000557037 FAM89BQ8N5H3 189 aa8.65□□□□□ -1.02
PSEN1-220ENST00000557037 RNF141Q8WVD5 230 aa8.65□□□□□ -1.02
PSEN1-220ENST00000557037 SLC25A46Q96AG3 418 aa8.65□□□□□ -1.02
PSEN1-220ENST00000557037 URM1Q9BTM9 101 aaKnown RBP8.65□□□□□ -1.02
PSEN1-220ENST00000557037 TAS2R8Q9NYW2 309 aa8.65□□□□□ -1.02
PSEN1-220ENST00000557037 F11RQ9Y624 299 aaKnown RBP8.65□□□□□ -1.02
PSEN1-220ENST00000557037 SAC3D1A6NKF1 404 aa8.64□□□□□ -1.03
PSEN1-220ENST00000557037 H3BMM0 161 aa8.64□□□□□ -1.03
PSEN1-220ENST00000557037 IGKV3-20P01619 116 aa8.64□□□□□ -1.03
PSEN1-220ENST00000557037 IGLV2-14P01704 120 aa8.64□□□□□ -1.03
PSEN1-220ENST00000557037 TRAPPC2P0DI81 140 aa8.64□□□□□ -1.03
PSEN1-220ENST00000557037 TRAPPC2BP0DI82 140 aa8.64□□□□□ -1.03
PSEN1-220ENST00000557037 MFAP4P55083 255 aa8.64□□□□□ -1.03
PSEN1-220ENST00000557037 MRPS15P82914 257 aaKnown RBP8.64□□□□□ -1.03
PSEN1-220ENST00000557037 RCN1Q15293 331 aa8.64□□□□□ -1.03
PSEN1-220ENST00000557037 TMEM69Q5SWH9 247 aa8.64□□□□□ -1.03
PSEN1-220ENST00000557037 DCANP1Q8TF63 244 aa8.64□□□□□ -1.03
PSEN1-220ENST00000557037 TMEM231Q9H6L2 316 aa8.64□□□□□ -1.03
PSEN1-220ENST00000557037 CLEC2DQ9UHP7 191 aa8.64□□□□□ -1.03
PSEN1-220ENST00000557037 OAZ3Q9UMX2 235 aa8.64□□□□□ -1.03
PSEN1-220ENST00000557037 HELTA6NFD8 242 aa8.63□□□□□ -1.03
PSEN1-220ENST00000557037 DIRAS3O95661 229 aa8.63□□□□□ -1.03
PSEN1-220ENST00000557037 BPNT1O95861 308 aa8.63□□□□□ -1.03
PSEN1-220ENST00000557037 CDK1P06493 297 aa8.63□□□□□ -1.03
PSEN1-220ENST00000557037 DEFB130BP0DP73 79 aa8.63□□□□□ -1.03
PSEN1-220ENST00000557037 DEFB130AP0DP74 79 aa8.63□□□□□ -1.03
PSEN1-220ENST00000557037 DHRS2Q13268 280 aa8.63□□□□□ -1.03
PSEN1-220ENST00000557037 Q96MT0 163 aa8.63□□□□□ -1.03
PSEN1-220ENST00000557037 HSD17B10Q99714 261 aaKnown RBP8.63□□□□□ -1.03
PSEN1-220ENST00000557037 FGF20Q9NP95 211 aaPredicted RBP8.63□□□□□ -1.03
PSEN1-220ENST00000557037 ARL2BPQ9Y2Y0 163 aa8.63□□□□□ -1.03
PSEN1-220ENST00000557037 IGKV1D-8A0A087WSZ0 117 aa8.62□□□□□ -1.03
PSEN1-220ENST00000557037 IGKV1D-13A0A0B4J2D9 117 aa8.62□□□□□ -1.03
PSEN1-220ENST00000557037 TEX50A0A1B0GTY4 177 aa8.62□□□□□ -1.03
PSEN1-220ENST00000557037 HBE1P02100 147 aa8.62□□□□□ -1.03
PSEN1-220ENST00000557037 IGKV1-13P0DP09 117 aa8.62□□□□□ -1.03
PSEN1-220ENST00000557037 NFYAP23511 347 aaPredicted RBP8.62□□□□□ -1.03
PSEN1-220ENST00000557037 P2RY1P47900 373 aa8.62□□□□□ -1.03
PSEN1-220ENST00000557037 EIF4EBP1Q13541 118 aaPredicted RBP8.62□□□□□ -1.03
PSEN1-220ENST00000557037 INSL4Q14641 139 aa8.62□□□□□ -1.03
PSEN1-220ENST00000557037 MISP3Q96FF7 219 aa8.62□□□□□ -1.03
PSEN1-220ENST00000557037 FNDC4Q9H6D8 234 aaPredicted RBP8.62□□□□□ -1.03
PSEN1-220ENST00000557037 ZFAND3Q9H8U3 227 aa8.62□□□□□ -1.03
PSEN1-220ENST00000557037 MRPS18AQ9NVS2 196 aaKnown RBP8.62□□□□□ -1.03
PSEN1-220ENST00000557037 POMPQ9Y244 141 aa8.62□□□□□ -1.03
PSEN1-220ENST00000557037 KCNK7Q9Y2U2 307 aa8.62□□□□□ -1.03
PSEN1-220ENST00000557037 DNAH8Q96JB1 4490 aa8.62□□□□□ -1.03
PSEN1-220ENST00000557037 GNG7O60262 68 aa8.61□□□□□ -1.03
PSEN1-220ENST00000557037 ALDH3B2P48448 385 aa8.61□□□□□ -1.03
PSEN1-220ENST00000557037 DEFB1P60022 68 aa8.61□□□□□ -1.03
PSEN1-220ENST00000557037 RNASE12Q5GAN4 147 aaKnown RBP8.61□□□□□ -1.03
PSEN1-220ENST00000557037 RHOXF1Q8NHV9 184 aa8.61□□□□□ -1.03
PSEN1-220ENST00000557037 MOB3AQ96BX8 217 aa8.61□□□□□ -1.03
PSEN1-220ENST00000557037 C7orf50Q9BRJ6 194 aaKnown RBP8.61□□□□□ -1.03
PSEN1-220ENST00000557037 KRTAP9-2Q9BYQ4 174 aa8.61□□□□□ -1.03
PSEN1-220ENST00000557037 TMEM140Q9NV12 185 aa8.61□□□□□ -1.03
PSEN1-220ENST00000557037 OR2W1Q9Y3N9 320 aa8.61□□□□□ -1.03
PSEN1-220ENST00000557037 A0A075B6Q4 140 aa8.6□□□□□ -1.03
PSEN1-220ENST00000557037 A0A087WTM6 91 aa8.6□□□□□ -1.03
PSEN1-220ENST00000557037 A0A1B0GU03 582 aa8.6□□□□□ -1.03
PSEN1-220ENST00000557037 I3L2K1 104 aa8.6□□□□□ -1.03
PSEN1-220ENST00000557037 TNFSF12O43508 249 aa8.6□□□□□ -1.03
PSEN1-220ENST00000557037 OXTP01178 125 aa8.6□□□□□ -1.03
PSEN1-220ENST00000557037 HLA-DQB1P01920 261 aa8.6□□□□□ -1.03
PSEN1-220ENST00000557037 P0C879 139 aa8.6□□□□□ -1.03
PSEN1-220ENST00000557037 CALB2P22676 271 aa8.6□□□□□ -1.03
PSEN1-220ENST00000557037 NPPCP23582 126 aa8.6□□□□□ -1.03
PSEN1-220ENST00000557037 SSX1Q16384 188 aa8.6□□□□□ -1.03
PSEN1-220ENST00000557037 SMN1Q16637 294 aaKnown RBP8.6□□□□□ -1.03
PSEN1-220ENST00000557037 RRN3P1Q2M238 152 aa8.6□□□□□ -1.03
PSEN1-220ENST00000557037 RBM48Q5RL73 367 aaKnown RBP8.6□□□□□ -1.03
PSEN1-220ENST00000557037 OGFRL1Q5TC84 451 aaPredicted RBP8.6□□□□□ -1.03
PSEN1-220ENST00000557037 THOC7Q6I9Y2 204 aaKnown RBP8.6□□□□□ -1.03
PSEN1-220ENST00000557037 HSD17B13Q7Z5P4 300 aaPredicted RBP8.6□□□□□ -1.03
PSEN1-220ENST00000557037 SPAG16Q8N0X2 631 aa8.6□□□□□ -1.03
PSEN1-220ENST00000557037 LINC00528Q8N1L1 170 aa8.6□□□□□ -1.03
PSEN1-220ENST00000557037 OR1L8Q8NGR8 309 aa8.6□□□□□ -1.03
PSEN1-220ENST00000557037 LSM10Q969L4 123 aaKnown RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms