RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 RIPPLY3P57055 190 aa18.84■□□□□ 0.61
SIX4-203ENST00000556952 HBG1P69891 147 aa18.84■□□□□ 0.61
SIX4-203ENST00000556952 HBG2P69892 147 aa18.84■□□□□ 0.61
SIX4-203ENST00000556952 SLC51BQ86UW2 128 aa18.84■□□□□ 0.61
SIX4-203ENST00000556952 C5orf56Q8N8D9 126 aa18.84■□□□□ 0.61
SIX4-203ENST00000556952 OR10W1Q8NGF6 305 aa18.84■□□□□ 0.61
SIX4-203ENST00000556952 NPY1RP25929 384 aa18.83■□□□□ 0.6
SIX4-203ENST00000556952 RAB11AP62491 216 aa18.83■□□□□ 0.6
SIX4-203ENST00000556952 BSXQ3C1V8 233 aa18.83■□□□□ 0.6
SIX4-203ENST00000556952 PRIMA1Q86XR5 153 aa18.83■□□□□ 0.6
SIX4-203ENST00000556952 TMEM219Q86XT9 240 aa18.83■□□□□ 0.6
SIX4-203ENST00000556952 TEX22C9J3V5 150 aa18.82■□□□□ 0.6
SIX4-203ENST00000556952 M0QZK8 103 aa18.82■□□□□ 0.6
SIX4-203ENST00000556952 OR8U8P0C7N1 319 aa18.82■□□□□ 0.6
SIX4-203ENST00000556952 IER3P46695 156 aa18.82■□□□□ 0.6
SIX4-203ENST00000556952 WT1-ASQ06250 92 aa18.82■□□□□ 0.6
SIX4-203ENST00000556952 FXYD3Q14802 87 aa18.82■□□□□ 0.6
SIX4-203ENST00000556952 Q6YL49 198 aa18.82■□□□□ 0.6
SIX4-203ENST00000556952 OR1S2Q8NGQ3 325 aa18.82■□□□□ 0.6
SIX4-203ENST00000556952 OR5C1Q8NGR4 320 aa18.82■□□□□ 0.6
SIX4-203ENST00000556952 SLA2Q9H6Q3 261 aa18.82■□□□□ 0.6
SIX4-203ENST00000556952 PAIP2BQ9ULR5 123 aaKnown RBP18.82■□□□□ 0.6
SIX4-203ENST00000556952 PLXNB1O43157 2135 aa18.82■□□□□ 0.6
SIX4-203ENST00000556952 IGLC7A0M8Q6 106 aa18.81■□□□□ 0.6
SIX4-203ENST00000556952 BTBD17A6NE02 478 aa18.81■□□□□ 0.6
SIX4-203ENST00000556952 SNCAP37840 140 aa18.81■□□□□ 0.6
SIX4-203ENST00000556952 CX3CL1P78423 397 aa18.81■□□□□ 0.6
SIX4-203ENST00000556952 TMEM217Q8N7C4 229 aa18.81■□□□□ 0.6
SIX4-203ENST00000556952 ARPC1AQ92747 370 aa18.81■□□□□ 0.6
SIX4-203ENST00000556952 BSCL2Q96G97 398 aaPredicted RBP18.81■□□□□ 0.6
SIX4-203ENST00000556952 ZNF471Q9BX82 626 aaPredicted RBP18.81■□□□□ 0.6
SIX4-203ENST00000556952 PMS2P5A8MQ11 134 aa18.81■□□□□ 0.6
SIX4-203ENST00000556952 UBA52P62987 128 aaKnown RBP18.81■□□□□ 0.6
SIX4-203ENST00000556952 LY6EQ16553 131 aa18.81■□□□□ 0.6
SIX4-203ENST00000556952 C2orf83Q53S99 150 aa18.81■□□□□ 0.6
SIX4-203ENST00000556952 OR10P1Q8NGE3 313 aa18.81■□□□□ 0.6
SIX4-203ENST00000556952 PINX1Q96BK5 328 aaKnown RBP18.81■□□□□ 0.6
SIX4-203ENST00000556952 ZNF48Q96MX3 618 aaPredicted RBP18.81■□□□□ 0.6
SIX4-203ENST00000556952 SMIM3Q9BZL3 60 aa18.81■□□□□ 0.6
SIX4-203ENST00000556952 CYTL1Q9NRR1 136 aa18.81■□□□□ 0.6
SIX4-203ENST00000556952 IGHV7-81A0A0B4J1V7 117 aa18.8■□□□□ 0.6
SIX4-203ENST00000556952 IGHV4-59P01825 116 aa18.8■□□□□ 0.6
SIX4-203ENST00000556952 OR13C7P0DN81 318 aa18.8■□□□□ 0.6
SIX4-203ENST00000556952 TUSC1Q2TAM9 212 aa18.8■□□□□ 0.6
SIX4-203ENST00000556952 OR8G2PQ6IF36 304 aa18.8■□□□□ 0.6
SIX4-203ENST00000556952 HAPLN4Q86UW8 402 aa18.8■□□□□ 0.6
SIX4-203ENST00000556952 ZNF114Q8NC26 417 aa18.8■□□□□ 0.6
SIX4-203ENST00000556952 STOML3Q8TAV4 291 aa18.8■□□□□ 0.6
SIX4-203ENST00000556952 TMEM170AQ8WVE7 144 aa18.8■□□□□ 0.6
SIX4-203ENST00000556952 DFFBO76075 338 aa18.79■□□□□ 0.6
SIX4-203ENST00000556952 JTBO76095 146 aa18.79■□□□□ 0.6
SIX4-203ENST00000556952 RNASE2P10153 161 aaKnown RBP18.79■□□□□ 0.6
SIX4-203ENST00000556952 SUB1P53999 127 aaKnown RBP eCLIP18.79■□□□□ 0.6
SIX4-203ENST00000556952 EIF5AP63241 154 aaKnown RBP18.79■□□□□ 0.6
SIX4-203ENST00000556952 ZNF266Q14584 549 aa18.79■□□□□ 0.6
SIX4-203ENST00000556952 SSMEM1Q8WWF3 244 aa18.79■□□□□ 0.6
SIX4-203ENST00000556952 BORCS7-ASMTA0A0B4J1R7 106 aa18.78■□□□□ 0.6
SIX4-203ENST00000556952 SLC38A11Q08AI6 406 aa18.78■□□□□ 0.6
SIX4-203ENST00000556952 ARL16Q0P5N6 197 aa18.78■□□□□ 0.6
SIX4-203ENST00000556952 SCGB2A2Q13296 93 aa18.78■□□□□ 0.6
SIX4-203ENST00000556952 CLINT1Q14677 625 aa18.78■□□□□ 0.6
SIX4-203ENST00000556952 ETV3LQ6ZN32 361 aa18.78■□□□□ 0.6
SIX4-203ENST00000556952 LILRB2Q8N423 598 aa18.78■□□□□ 0.6
SIX4-203ENST00000556952 ATP5SQ99766 215 aa18.78■□□□□ 0.6
SIX4-203ENST00000556952 IFNA4P05014 189 aa18.77■□□□□ 0.6
SIX4-203ENST00000556952 TPT1P13693 172 aaKnown RBP18.77■□□□□ 0.6
SIX4-203ENST00000556952 NDPQ00604 133 aa18.77■□□□□ 0.6
SIX4-203ENST00000556952 ATP6V1FQ16864 119 aa18.77■□□□□ 0.6
SIX4-203ENST00000556952 UBAC2Q8NBM4 344 aa18.77■□□□□ 0.6
SIX4-203ENST00000556952 ABHD5Q8WTS1 349 aa18.77■□□□□ 0.6
SIX4-203ENST00000556952 VPREB3Q9UKI3 123 aa18.77■□□□□ 0.6
SIX4-203ENST00000556952 AMY1AP04745 511 aa18.76■□□□□ 0.59
SIX4-203ENST00000556952 AREGP15514 252 aa18.76■□□□□ 0.59
SIX4-203ENST00000556952 IFITM2Q01629 132 aa18.76■□□□□ 0.59
SIX4-203ENST00000556952 RPL7L1Q6DKI1 246 aaKnown RBP18.76■□□□□ 0.59
SIX4-203ENST00000556952 ST8SIA2Q92186 375 aa18.76■□□□□ 0.59
SIX4-203ENST00000556952 P2RX4Q99571 388 aa18.76■□□□□ 0.59
SIX4-203ENST00000556952 HSPB9Q9BQS6 159 aa18.76■□□□□ 0.59
SIX4-203ENST00000556952 WFDC1Q9HC57 220 aa18.76■□□□□ 0.59
SIX4-203ENST00000556952 PRSS46E5RG02 174 aa18.76■□□□□ 0.59
SIX4-203ENST00000556952 GGACTQ9BVM4 153 aa18.76■□□□□ 0.59
SIX4-203ENST00000556952 TEX261Q6UWH6 196 aa18.75■□□□□ 0.59
SIX4-203ENST00000556952 FAM103A1Q9BTL3 118 aaKnown RBP18.75■□□□□ 0.59
SIX4-203ENST00000556952 REG1AP05451 166 aa18.74■□□□□ 0.59
SIX4-203ENST00000556952 PVRIGQ6DKI7 326 aa18.74■□□□□ 0.59
SIX4-203ENST00000556952 BAP18Q8IXM2 172 aa18.74■□□□□ 0.59
SIX4-203ENST00000556952 OR1P1Q8NH06 330 aa18.74■□□□□ 0.59
SIX4-203ENST00000556952 SGMS2Q8NHU3 365 aa18.74■□□□□ 0.59
SIX4-203ENST00000556952 RNASEH2CQ8TDP1 164 aaKnown RBP18.74■□□□□ 0.59
SIX4-203ENST00000556952 TMEM147Q9BVK8 224 aa18.74■□□□□ 0.59
SIX4-203ENST00000556952 F11RQ9Y624 299 aaKnown RBP18.74■□□□□ 0.59
SIX4-203ENST00000556952 ATRQ13535 2644 aa18.74■□□□□ 0.59
SIX4-203ENST00000556952 NPIPB5A8MRT5 1133 aa18.73■□□□□ 0.59
SIX4-203ENST00000556952 HOXA3O43365 443 aaPredicted RBP18.73■□□□□ 0.59
SIX4-203ENST00000556952 APELAP0DMC3 54 aa18.73■□□□□ 0.59
SIX4-203ENST00000556952 CTRB1P17538 263 aa18.73■□□□□ 0.59
SIX4-203ENST00000556952 DLK1P80370 383 aa18.73■□□□□ 0.59
SIX4-203ENST00000556952 VWC2Q2TAL6 325 aa18.73■□□□□ 0.59
SIX4-203ENST00000556952 CTRB2Q6GPI1 263 aa18.73■□□□□ 0.59
SIX4-203ENST00000556952 TMEM86BQ8N661 226 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms