RNA–Protein interactions for RNA: ENST00000556825.5

SHMT2-226, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 2,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-226ENST00000556825 PVRP15151 417 aa11.43□□□□□ -0.58
SHMT2-226ENST00000556825 ATP5IP56385 69 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-226ENST00000556825 FHL3Q13643 280 aa11.43□□□□□ -0.58
SHMT2-226ENST00000556825 KIR2DS5Q14953 304 aa11.43□□□□□ -0.58
SHMT2-226ENST00000556825 CENPWQ5EE01 88 aa11.43□□□□□ -0.58
SHMT2-226ENST00000556825 ANKRD37Q7Z713 158 aa11.43□□□□□ -0.58
SHMT2-226ENST00000556825 C1orf210Q8IVY1 113 aa11.43□□□□□ -0.58
SHMT2-226ENST00000556825 SHISA5Q8N114 240 aa11.43□□□□□ -0.58
SHMT2-226ENST00000556825 PRELID3AQ96N28 172 aa11.43□□□□□ -0.58
SHMT2-226ENST00000556825 KMT2EQ8IZD2 1858 aa11.42□□□□□ -0.58
SHMT2-226ENST00000556825 ARID1BQ8NFD5 2236 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-226ENST00000556825 GOLGA4Q13439 2230 aaKnown RBP11.42□□□□□ -0.58
SHMT2-226ENST00000556825 A0A1B0GWB2 263 aa11.42□□□□□ -0.58
SHMT2-226ENST00000556825 PDCD6O75340 191 aa11.42□□□□□ -0.58
SHMT2-226ENST00000556825 ANXA2RQ3ZCQ2 193 aa11.42□□□□□ -0.58
SHMT2-226ENST00000556825 WIPI1Q5MNZ9 446 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-226ENST00000556825 SHANK1Q9Y566 2161 aa11.42□□□□□ -0.58
SHMT2-226ENST00000556825 CPAMD8Q8IZJ3 1885 aa11.42□□□□□ -0.58
SHMT2-226ENST00000556825 PMS2P5A8MQ11 134 aa11.41□□□□□ -0.58
SHMT2-226ENST00000556825 FAM90A26D6RGX4 464 aa11.41□□□□□ -0.58
SHMT2-226ENST00000556825 TUSC2O75896 110 aa11.41□□□□□ -0.58
SHMT2-226ENST00000556825 MFAP2P55001 183 aa11.41□□□□□ -0.58
SHMT2-226ENST00000556825 NDUFV3P56181 108 aaKnown RBP11.41□□□□□ -0.58
SHMT2-226ENST00000556825 DIAPH2-AS1Q14236 149 aa11.41□□□□□ -0.58
SHMT2-226ENST00000556825 NNATQ16517 81 aa11.41□□□□□ -0.58
SHMT2-226ENST00000556825 TMEM240Q5SV17 173 aa11.41□□□□□ -0.58
SHMT2-226ENST00000556825 TMEFF1Q8IYR6 380 aa11.41□□□□□ -0.58
SHMT2-226ENST00000556825 OR1L3Q8NH93 324 aa11.41□□□□□ -0.58
SHMT2-226ENST00000556825 LOXL2Q9Y4K0 774 aa11.41□□□□□ -0.58
SHMT2-226ENST00000556825 RHODO00212 210 aa11.41□□□□□ -0.58
SHMT2-226ENST00000556825 SRD5A1P18405 259 aa11.41□□□□□ -0.58
SHMT2-226ENST00000556825 OPRK1P41145 380 aa11.41□□□□□ -0.58
SHMT2-226ENST00000556825 PSG5Q15238 335 aa11.41□□□□□ -0.58
SHMT2-226ENST00000556825 RTL8BQ17RB0 113 aa11.41□□□□□ -0.58
SHMT2-226ENST00000556825 IBA57Q5T440 356 aaKnown RBP11.41□□□□□ -0.58
SHMT2-226ENST00000556825 PQLC2Q6ZP29 291 aa11.41□□□□□ -0.58
SHMT2-226ENST00000556825 Q6ZS92 163 aa11.41□□□□□ -0.58
SHMT2-226ENST00000556825 IL1F10Q8WWZ1 152 aa11.41□□□□□ -0.58
SHMT2-226ENST00000556825 RRHO14718 337 aa11.4□□□□□ -0.58
SHMT2-226ENST00000556825 IGKV1-39P01597 117 aa11.4□□□□□ -0.58
SHMT2-226ENST00000556825 IGKV1D-39P04432 117 aa11.4□□□□□ -0.58
SHMT2-226ENST00000556825 P04436 131 aa11.4□□□□□ -0.58
SHMT2-226ENST00000556825 AREGP15514 252 aa11.4□□□□□ -0.58
SHMT2-226ENST00000556825 Q8N7P7 452 aa11.4□□□□□ -0.58
SHMT2-226ENST00000556825 TM4SF19Q96DZ7 209 aa11.4□□□□□ -0.58
SHMT2-226ENST00000556825 TPPP3Q9BW30 176 aa11.4□□□□□ -0.58
SHMT2-226ENST00000556825 NOTCH4Q99466 2003 aa11.4□□□□□ -0.58
SHMT2-226ENST00000556825 TEX50A0A1B0GTY4 177 aa11.4□□□□□ -0.58
SHMT2-226ENST00000556825 IGLL5B9A064 214 aa11.4□□□□□ -0.58
SHMT2-226ENST00000556825 IGKV1-5P01602 117 aa11.4□□□□□ -0.58
SHMT2-226ENST00000556825 MALLQ13021 153 aa11.4□□□□□ -0.58
SHMT2-226ENST00000556825 ADAMTSL4Q6UY14 1074 aa11.4□□□□□ -0.58
SHMT2-226ENST00000556825 MOGAT3Q86VF5 341 aa11.4□□□□□ -0.58
SHMT2-226ENST00000556825 LYZL4Q96KX0 146 aa11.4□□□□□ -0.58
SHMT2-226ENST00000556825 TRIB1Q96RU8 372 aa11.4□□□□□ -0.58
SHMT2-226ENST00000556825 LIN7CQ9NUP9 197 aaKnown RBP11.4□□□□□ -0.58
SHMT2-226ENST00000556825 UTS2O95399 124 aa11.39□□□□□ -0.59
SHMT2-226ENST00000556825 IGLV3-1P01715 115 aa11.39□□□□□ -0.59
SHMT2-226ENST00000556825 NHLRC2Q8NBF2 726 aa11.39□□□□□ -0.59
SHMT2-226ENST00000556825 PPP1R35Q8TAP8 253 aa11.39□□□□□ -0.59
SHMT2-226ENST00000556825 TMEM126AQ9H061 195 aa11.39□□□□□ -0.59
SHMT2-226ENST00000556825 TMEM8BA6NDV4 472 aa11.39□□□□□ -0.59
SHMT2-226ENST00000556825 CEACAM4O75871 244 aa11.39□□□□□ -0.59
SHMT2-226ENST00000556825 SRSF1Q07955 248 aaKnown RBP eCLIP11.39□□□□□ -0.59
SHMT2-226ENST00000556825 ZNF766Q5HY98 468 aa11.39□□□□□ -0.59
SHMT2-226ENST00000556825 TMEM178AQ8NBL3 297 aa11.39□□□□□ -0.59
SHMT2-226ENST00000556825 PILRAQ9UKJ1 303 aa11.39□□□□□ -0.59
SHMT2-226ENST00000556825 PRRC2BQ5JSZ5 2229 aaKnown RBP11.38□□□□□ -0.59
SHMT2-226ENST00000556825 SMIM9A6NGZ8 99 aa11.38□□□□□ -0.59
SHMT2-226ENST00000556825 E9PLN8 166 aa11.38□□□□□ -0.59
SHMT2-226ENST00000556825 FNDC10F2Z333 226 aa11.38□□□□□ -0.59
SHMT2-226ENST00000556825 SPRY1O43609 319 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-226ENST00000556825 FXYD2P54710 66 aa11.38□□□□□ -0.59
SHMT2-226ENST00000556825 PIGYQ3MUY2 71 aa11.38□□□□□ -0.59
SHMT2-226ENST00000556825 PPP1R32Q7Z5V6 425 aa11.38□□□□□ -0.59
SHMT2-226ENST00000556825 OR51H1Q8NH63 302 aa11.38□□□□□ -0.59
SHMT2-226ENST00000556825 C16orf52Q8NHV5 167 aa11.38□□□□□ -0.59
SHMT2-226ENST00000556825 FGF22Q9HCT0 170 aa11.38□□□□□ -0.59
SHMT2-226ENST00000556825 PRDM6Q9NQX0 595 aa11.38□□□□□ -0.59
SHMT2-226ENST00000556825 K7ERJ3 54 aa11.37□□□□□ -0.59
SHMT2-226ENST00000556825 DHRS3O75911 302 aa11.37□□□□□ -0.59
SHMT2-226ENST00000556825 GCSHP23434 173 aa11.37□□□□□ -0.59
SHMT2-226ENST00000556825 GCHFRP30047 84 aa11.37□□□□□ -0.59
SHMT2-226ENST00000556825 BCL6BQ8N143 479 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-226ENST00000556825 COX14Q96I36 57 aa11.37□□□□□ -0.59
SHMT2-226ENST00000556825 C2CD4DB7Z1M9 353 aa11.37□□□□□ -0.59
SHMT2-226ENST00000556825 FCN3O75636 299 aa11.37□□□□□ -0.59
SHMT2-226ENST00000556825 SLC25A5P05141 298 aaKnown RBP11.37□□□□□ -0.59
SHMT2-226ENST00000556825 EDDM3BP56851 147 aa11.37□□□□□ -0.59
SHMT2-226ENST00000556825 C3AR1Q16581 482 aa11.37□□□□□ -0.59
SHMT2-226ENST00000556825 DTX1Q86Y01 620 aa11.37□□□□□ -0.59
SHMT2-226ENST00000556825 OSR2Q8N2R0 312 aa11.37□□□□□ -0.59
SHMT2-226ENST00000556825 TMEM116Q8NCL8 245 aa11.37□□□□□ -0.59
SHMT2-226ENST00000556825 C8orf46Q8TAG6 207 aa11.37□□□□□ -0.59
SHMT2-226ENST00000556825 OXGR1Q96P68 337 aa11.37□□□□□ -0.59
SHMT2-226ENST00000556825 MAP1LC3AQ9H492 121 aa11.37□□□□□ -0.59
SHMT2-226ENST00000556825 IGFLR1Q9H665 355 aa11.37□□□□□ -0.59
SHMT2-226ENST00000556825 ZNF442Q9H7R0 627 aa11.37□□□□□ -0.59
SHMT2-226ENST00000556825 PIGLQ9Y2B2 252 aa11.37□□□□□ -0.59
SHMT2-226ENST00000556825 C5orf63A6NC05 138 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms