RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 UBBP0CG47 229 aa4.35□□□□□ -1.71
PRKCH-220ENST00000556164 FOLR2P14207 255 aa4.35□□□□□ -1.71
PRKCH-220ENST00000556164 HTR2CP28335 458 aa4.35□□□□□ -1.71
PRKCH-220ENST00000556164 KIR2DS2P43631 304 aa4.35□□□□□ -1.71
PRKCH-220ENST00000556164 RASSF2P50749 326 aa4.35□□□□□ -1.71
PRKCH-220ENST00000556164 BCAP31P51572 246 aa4.35□□□□□ -1.71
PRKCH-220ENST00000556164 RPS27AP62979 156 aaKnown RBP4.35□□□□□ -1.71
PRKCH-220ENST00000556164 EWSR1Q01844 656 aaKnown RBP eCLIP4.35□□□□□ -1.71
PRKCH-220ENST00000556164 MED21Q13503 144 aa4.35□□□□□ -1.71
PRKCH-220ENST00000556164 SPCS2Q15005 226 aa4.35□□□□□ -1.71
PRKCH-220ENST00000556164 TNXAQ16473 311 aa4.35□□□□□ -1.71
PRKCH-220ENST00000556164 PIK3CD-AS1Q5SR53 167 aa4.35□□□□□ -1.71
PRKCH-220ENST00000556164 H2BFWTQ7Z2G1 175 aa4.35□□□□□ -1.71
PRKCH-220ENST00000556164 LYG2Q86SG7 212 aa4.35□□□□□ -1.71
PRKCH-220ENST00000556164 FAM223AQ8IWN6 122 aa4.35□□□□□ -1.71
PRKCH-220ENST00000556164 CACNG8Q8WXS5 425 aa4.35□□□□□ -1.71
PRKCH-220ENST00000556164 ACOT12Q8WYK0 555 aa4.35□□□□□ -1.71
PRKCH-220ENST00000556164 PTX4Q96A99 478 aa4.35□□□□□ -1.71
PRKCH-220ENST00000556164 CXorf58Q96LI9 332 aa4.35□□□□□ -1.71
PRKCH-220ENST00000556164 PLEKHJ1Q9NW61 149 aa4.35□□□□□ -1.71
PRKCH-220ENST00000556164 TECRQ9NZ01 308 aaKnown RBP4.35□□□□□ -1.71
PRKCH-220ENST00000556164 ZNF230Q9UIE0 474 aaPredicted RBP4.35□□□□□ -1.71
PRKCH-220ENST00000556164 AK3Q9UIJ7 227 aa4.35□□□□□ -1.71
PRKCH-220ENST00000556164 HERC2O95714 4834 aa4.34□□□□□ -1.71
PRKCH-220ENST00000556164 TRBV6-6A0A0A6YYG2 114 aa4.34□□□□□ -1.71
PRKCH-220ENST00000556164 SMCO3A2RU48 225 aa4.34□□□□□ -1.71
PRKCH-220ENST00000556164 CCSO14618 274 aa4.34□□□□□ -1.71
PRKCH-220ENST00000556164 OR2J3O76001 311 aa4.34□□□□□ -1.71
PRKCH-220ENST00000556164 NDUFB8O95169 186 aa4.34□□□□□ -1.71
PRKCH-220ENST00000556164 MBP02144 154 aa4.34□□□□□ -1.71
PRKCH-220ENST00000556164 TAS2R43P59537 309 aa4.34□□□□□ -1.71
PRKCH-220ENST00000556164 ZNF45Q02386 682 aa4.34□□□□□ -1.71
PRKCH-220ENST00000556164 TNFRSF9Q07011 255 aa4.34□□□□□ -1.71
PRKCH-220ENST00000556164 UNC119Q13432 240 aa4.34□□□□□ -1.71
PRKCH-220ENST00000556164 RTL8BQ17RB0 113 aa4.34□□□□□ -1.71
PRKCH-220ENST00000556164 DEFB135Q30KP9 77 aa4.34□□□□□ -1.71
PRKCH-220ENST00000556164 C15orf32Q32M92 178 aa4.34□□□□□ -1.71
PRKCH-220ENST00000556164 VMA21Q3ZAQ7 101 aa4.34□□□□□ -1.71
PRKCH-220ENST00000556164 GLT8D1Q68CQ7 371 aa4.34□□□□□ -1.71
PRKCH-220ENST00000556164 ZNF57Q68EA5 555 aaPredicted RBP4.34□□□□□ -1.71
PRKCH-220ENST00000556164 IDO2Q6ZQW0 420 aa4.34□□□□□ -1.71
PRKCH-220ENST00000556164 TMEM61Q8N0U2 210 aa4.34□□□□□ -1.71
PRKCH-220ENST00000556164 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.34□□□□□ -1.71
PRKCH-220ENST00000556164 OR4D5Q8NGN0 318 aa4.34□□□□□ -1.71
PRKCH-220ENST00000556164 OR1L4Q8NGR5 311 aa4.34□□□□□ -1.71
PRKCH-220ENST00000556164 LRRC20Q8TCA0 184 aa4.34□□□□□ -1.71
PRKCH-220ENST00000556164 GATAD1Q8WUU5 269 aa4.34□□□□□ -1.71
PRKCH-220ENST00000556164 SRSF12Q8WXF0 261 aaKnown RBP4.34□□□□□ -1.71
PRKCH-220ENST00000556164 TMEM80Q96HE8 168 aa4.34□□□□□ -1.71
PRKCH-220ENST00000556164 C20orf24Q9BUV8 137 aa4.34□□□□□ -1.71
PRKCH-220ENST00000556164 TM2D1Q9BX74 207 aa4.34□□□□□ -1.71
PRKCH-220ENST00000556164 KRTAP4-8Q9BYQ9 185 aa4.34□□□□□ -1.71
PRKCH-220ENST00000556164 OR2D2Q9H210 308 aa4.34□□□□□ -1.71
PRKCH-220ENST00000556164 PTTG2Q9NZH5 202 aa4.34□□□□□ -1.71
PRKCH-220ENST00000556164 DAPK2Q9UIK4 370 aa4.34□□□□□ -1.71
PRKCH-220ENST00000556164 PAIP2BQ9ULR5 123 aaKnown RBP4.34□□□□□ -1.71
PRKCH-220ENST00000556164 MGAT4AQ9UM21 535 aa4.34□□□□□ -1.71
PRKCH-220ENST00000556164 MUC4Q99102 2169 aa4.33□□□□□ -1.72
PRKCH-220ENST00000556164 A0A0A6YYD4 124 aa4.33□□□□□ -1.72
PRKCH-220ENST00000556164 TRBV9A0A0B4J1U6 114 aa4.33□□□□□ -1.72
PRKCH-220ENST00000556164 IGKV1-6A0A0C4DH72 117 aa4.33□□□□□ -1.72
PRKCH-220ENST00000556164 SRRM4A7MD48 611 aaKnown RBP4.33□□□□□ -1.72
PRKCH-220ENST00000556164 LGALS9O00182 355 aa4.33□□□□□ -1.72
PRKCH-220ENST00000556164 SOCS1O15524 211 aa4.33□□□□□ -1.72
PRKCH-220ENST00000556164 GGCTO75223 188 aaKnown RBP4.33□□□□□ -1.72
PRKCH-220ENST00000556164 CRYZL1O95825 349 aa4.33□□□□□ -1.72
PRKCH-220ENST00000556164 IGHV3-23P01764 117 aa4.33□□□□□ -1.72
PRKCH-220ENST00000556164 CD3GP09693 182 aa4.33□□□□□ -1.72
PRKCH-220ENST00000556164 HSMCR30P0CW71 290 aa4.33□□□□□ -1.72
PRKCH-220ENST00000556164 CELP19835 753 aa4.33□□□□□ -1.72
PRKCH-220ENST00000556164 CBLN1P23435 193 aa4.33□□□□□ -1.72
PRKCH-220ENST00000556164 MAP2K4P45985 399 aa4.33□□□□□ -1.72
PRKCH-220ENST00000556164 APOC4P55056 127 aa4.33□□□□□ -1.72
PRKCH-220ENST00000556164 UBE2KP61086 200 aa4.33□□□□□ -1.72
PRKCH-220ENST00000556164 S100A12P80511 92 aa4.33□□□□□ -1.72
PRKCH-220ENST00000556164 OPCMLQ14982 345 aa4.33□□□□□ -1.72
PRKCH-220ENST00000556164 PRSS8Q16651 343 aa4.33□□□□□ -1.72
PRKCH-220ENST00000556164 MRGPRG-AS1Q2M3A8 158 aa4.33□□□□□ -1.72
PRKCH-220ENST00000556164 RBM48Q5RL73 367 aaKnown RBP4.33□□□□□ -1.72
PRKCH-220ENST00000556164 C10orf55Q5SWW7 151 aa4.33□□□□□ -1.72
PRKCH-220ENST00000556164 LGALS9CQ6DKI2 356 aa4.33□□□□□ -1.72
PRKCH-220ENST00000556164 GBGT1Q8N5D6 347 aa4.33□□□□□ -1.72
PRKCH-220ENST00000556164 NECAP1Q8NC96 275 aa4.33□□□□□ -1.72
PRKCH-220ENST00000556164 ZNF485Q8NCK3 441 aa4.33□□□□□ -1.72
PRKCH-220ENST00000556164 ZNF555Q8NEP9 628 aa4.33□□□□□ -1.72
PRKCH-220ENST00000556164 OR11H4Q8NGC9 324 aa4.33□□□□□ -1.72
PRKCH-220ENST00000556164 PHLDA1Q8WV24 401 aaPredicted RBP4.33□□□□□ -1.72
PRKCH-220ENST00000556164 CMSS1Q9BQ75 279 aaKnown RBP4.33□□□□□ -1.72
PRKCH-220ENST00000556164 LPAR5Q9H1C0 372 aa4.33□□□□□ -1.72
PRKCH-220ENST00000556164 C12orf4Q9NQ89 552 aa4.33□□□□□ -1.72
PRKCH-220ENST00000556164 C8orf4Q9NR00 106 aa4.33□□□□□ -1.72
PRKCH-220ENST00000556164 SDHAF2Q9NX18 166 aa4.33□□□□□ -1.72
PRKCH-220ENST00000556164 MLXQ9UH92 298 aa4.33□□□□□ -1.72
PRKCH-220ENST00000556164 CSDC2Q9Y534 153 aaKnown RBP4.33□□□□□ -1.72
PRKCH-220ENST00000556164 RBM7Q9Y580 266 aaKnown RBP4.33□□□□□ -1.72
PRKCH-220ENST00000556164 HECTD4Q9Y4D8 3996 aa4.33□□□□□ -1.72
PRKCH-220ENST00000556164 TEX13DA0A0J9YY54 714 aaPredicted RBP4.32□□□□□ -1.72
PRKCH-220ENST00000556164 TMEM213A2RRL7 107 aa4.32□□□□□ -1.72
PRKCH-220ENST00000556164 FBLL1A6NHQ2 334 aaKnown RBP4.32□□□□□ -1.72
PRKCH-220ENST00000556164 TMEM14DPA8MWL7 114 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms