RNA–Protein interactions for RNA: ENST00000556076.5

CHGA-204, Transcript of chromogranin A, humanhuman

TSL 5

Gene CHGA, Length 896 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-204ENST00000556076 ZFAND6Q6FIF0 208 aa12.18□□□□□ -0.46
CHGA-204ENST00000556076 TBC1D26Q86UD7 250 aa12.18□□□□□ -0.46
CHGA-204ENST00000556076 GPHB5Q86YW7 130 aa12.18□□□□□ -0.46
CHGA-204ENST00000556076 ZNF502Q8TBZ5 544 aa12.18□□□□□ -0.46
CHGA-204ENST00000556076 FAM110AQ9BQ89 295 aa12.18□□□□□ -0.46
CHGA-204ENST00000556076 SOSTQ9BQB4 213 aa12.18□□□□□ -0.46
CHGA-204ENST00000556076 NEURL2Q9BR09 285 aa12.18□□□□□ -0.46
CHGA-204ENST00000556076 IGHV3OR16-8A0A075B7F1 116 aa12.17□□□□□ -0.46
CHGA-204ENST00000556076 LGALS9O00182 355 aa12.17□□□□□ -0.46
CHGA-204ENST00000556076 SNAPC5O75971 98 aa12.17□□□□□ -0.46
CHGA-204ENST00000556076 SERPINE2P07093 398 aa12.17□□□□□ -0.46
CHGA-204ENST00000556076 HIST1H1BP16401 226 aaKnown RBP12.17□□□□□ -0.46
CHGA-204ENST00000556076 PI3P19957 117 aa12.17□□□□□ -0.46
CHGA-204ENST00000556076 PTBP1P26599 531 aaKnown RBP eCLIP12.17□□□□□ -0.46
CHGA-204ENST00000556076 IZUMO4Q1ZYL8 232 aa12.17□□□□□ -0.46
CHGA-204ENST00000556076 CASC10Q5T4H9 136 aa12.17□□□□□ -0.46
CHGA-204ENST00000556076 THOC7Q6I9Y2 204 aaKnown RBP12.17□□□□□ -0.46
CHGA-204ENST00000556076 TMEM61Q8N0U2 210 aa12.17□□□□□ -0.46
CHGA-204ENST00000556076 CCDC71LQ8N9Z2 235 aa12.17□□□□□ -0.46
CHGA-204ENST00000556076 TSC22D3Q99576 134 aa12.17□□□□□ -0.46
CHGA-204ENST00000556076 SRSF8Q9BRL6 282 aaKnown RBP12.17□□□□□ -0.46
CHGA-204ENST00000556076 OR51B2Q9Y5P1 312 aa12.17□□□□□ -0.46
CHGA-204ENST00000556076 RBMY1BA6NDE4 496 aaKnown RBP12.16□□□□□ -0.46
CHGA-204ENST00000556076 RBMY1EA6NEQ0 496 aaKnown RBP12.16□□□□□ -0.46
CHGA-204ENST00000556076 OR2T8A6NH00 312 aa12.16□□□□□ -0.46
CHGA-204ENST00000556076 C3orf84H3BNL1 204 aa12.16□□□□□ -0.46
CHGA-204ENST00000556076 SCAF4O95104 1147 aaKnown RBP12.16□□□□□ -0.46
CHGA-204ENST00000556076 RBMY1DP0C7P1 496 aaKnown RBP12.16□□□□□ -0.46
CHGA-204ENST00000556076 SURF2Q15527 256 aaPredicted RBP12.16□□□□□ -0.46
CHGA-204ENST00000556076 FAM209BQ5JX69 171 aa12.16□□□□□ -0.46
CHGA-204ENST00000556076 SLC25A24Q6NUK1 477 aa12.16□□□□□ -0.46
CHGA-204ENST00000556076 BTNL8Q6UX41 500 aa12.16□□□□□ -0.46
CHGA-204ENST00000556076 GDPD1Q8N9F7 314 aa12.16□□□□□ -0.46
CHGA-204ENST00000556076 UXS1Q8NBZ7 420 aa12.16□□□□□ -0.46
CHGA-204ENST00000556076 OR4D10Q8NGI6 311 aa12.16□□□□□ -0.46
CHGA-204ENST00000556076 OR1L8Q8NGR8 309 aa12.16□□□□□ -0.46
CHGA-204ENST00000556076 PRRT1Q99946 306 aa12.16□□□□□ -0.46
CHGA-204ENST00000556076 NDUFA4L2Q9NRX3 87 aa12.16□□□□□ -0.46
CHGA-204ENST00000556076 FKBP11Q9NYL4 201 aa12.16□□□□□ -0.46
CHGA-204ENST00000556076 COPZ2Q9P299 210 aa12.16□□□□□ -0.46
CHGA-204ENST00000556076 TRBV7-1A0A0A6YYK4 115 aa12.15□□□□□ -0.46
CHGA-204ENST00000556076 ANKRD20A5PA0PJZ0 165 aa12.15□□□□□ -0.46
CHGA-204ENST00000556076 B3GALNT1O75752 331 aa12.15□□□□□ -0.46
CHGA-204ENST00000556076 ATG12O94817 140 aa12.15□□□□□ -0.46
CHGA-204ENST00000556076 PPP5CP53041 499 aa12.15□□□□□ -0.46
CHGA-204ENST00000556076 PIGPP57054 158 aa12.15□□□□□ -0.46
CHGA-204ENST00000556076 FAM106AQ4KMX7 169 aa12.15□□□□□ -0.46
CHGA-204ENST00000556076 HSD17B13Q7Z5P4 300 aaPredicted RBP12.15□□□□□ -0.46
CHGA-204ENST00000556076 OR2K2Q8NGT1 345 aa12.15□□□□□ -0.46
CHGA-204ENST00000556076 CXorf58Q96LI9 332 aa12.15□□□□□ -0.46
CHGA-204ENST00000556076 CITED4Q96RK1 184 aa12.15□□□□□ -0.46
CHGA-204ENST00000556076 SCP2D1Q9UJQ7 156 aa12.15□□□□□ -0.46
CHGA-204ENST00000556076 C14orf166Q9Y224 244 aaKnown RBP12.15□□□□□ -0.46
CHGA-204ENST00000556076 STARD9Q9P2P6 4700 aa12.14□□□□□ -0.47
CHGA-204ENST00000556076 A8MWP6 167 aa12.14□□□□□ -0.47
CHGA-204ENST00000556076 F8W735 103 aaPredicted RBP12.14□□□□□ -0.47
CHGA-204ENST00000556076 CYB5BO43169 146 aa12.14□□□□□ -0.47
CHGA-204ENST00000556076 ZNF207O43670 478 aaKnown RBP12.14□□□□□ -0.47
CHGA-204ENST00000556076 IGHV3-48P01763 117 aa12.14□□□□□ -0.47
CHGA-204ENST00000556076 CTSDP07339 412 aaPredicted RBP12.14□□□□□ -0.47
CHGA-204ENST00000556076 FAUP35544 74 aaKnown RBP12.14□□□□□ -0.47
CHGA-204ENST00000556076 AP3S2P59780 193 aa12.14□□□□□ -0.47
CHGA-204ENST00000556076 PYDC2Q56P42 97 aa12.14□□□□□ -0.47
CHGA-204ENST00000556076 SPINK9Q5DT21 86 aa12.14□□□□□ -0.47
CHGA-204ENST00000556076 PLET1Q6UQ28 207 aa12.14□□□□□ -0.47
CHGA-204ENST00000556076 OR4C16Q8NGL9 310 aa12.14□□□□□ -0.47
CHGA-204ENST00000556076 MRGPRFQ96AM1 343 aa12.14□□□□□ -0.47
CHGA-204ENST00000556076 SEC22AQ96IW7 307 aa12.14□□□□□ -0.47
CHGA-204ENST00000556076 SCGB3A2Q96PL1 93 aa12.14□□□□□ -0.47
CHGA-204ENST00000556076 CHRDL1Q9BU40 450 aa12.14□□□□□ -0.47
CHGA-204ENST00000556076 SRD5A3Q9H8P0 318 aa12.14□□□□□ -0.47
CHGA-204ENST00000556076 EDA2RQ9HAV5 297 aa12.14□□□□□ -0.47
CHGA-204ENST00000556076 PRNDQ9UKY0 176 aa12.14□□□□□ -0.47
CHGA-204ENST00000556076 C3orf85A0A1B0GTC6 90 aa12.13□□□□□ -0.47
CHGA-204ENST00000556076 OR11H12B2RN74 326 aa12.13□□□□□ -0.47
CHGA-204ENST00000556076 TGOLN2O43493 480 aa12.13□□□□□ -0.47
CHGA-204ENST00000556076 LYL1P12980 280 aa12.13□□□□□ -0.47
CHGA-204ENST00000556076 SPANXN2Q5MJ10 180 aa12.13□□□□□ -0.47
CHGA-204ENST00000556076 ZNF57Q68EA5 555 aaPredicted RBP12.13□□□□□ -0.47
CHGA-204ENST00000556076 LINC00322Q6ZN03 302 aaPredicted RBP12.13□□□□□ -0.47
CHGA-204ENST00000556076 H2BFWTQ7Z2G1 175 aa12.13□□□□□ -0.47
CHGA-204ENST00000556076 CCDC190Q86UF4 302 aa12.13□□□□□ -0.47
CHGA-204ENST00000556076 OR13C8Q8NGS7 320 aa12.13□□□□□ -0.47
CHGA-204ENST00000556076 MARCH1Q8TCQ1 289 aa12.13□□□□□ -0.47
CHGA-204ENST00000556076 DEDD2Q8WXF8 326 aa12.13□□□□□ -0.47
CHGA-204ENST00000556076 LSM10Q969L4 123 aaKnown RBP12.13□□□□□ -0.47
CHGA-204ENST00000556076 ZNF414Q96IQ9 312 aa12.13□□□□□ -0.47
CHGA-204ENST00000556076 SPATA25Q9BR10 227 aa12.13□□□□□ -0.47
CHGA-204ENST00000556076 TMEM14BQ9NUH8 114 aa12.13□□□□□ -0.47
CHGA-204ENST00000556076 SLC2A8Q9NY64 477 aa12.13□□□□□ -0.47
CHGA-204ENST00000556076 F11RQ9Y624 299 aaKnown RBP12.13□□□□□ -0.47
CHGA-204ENST00000556076 C15orf61A6NNL5 157 aa12.12□□□□□ -0.47
CHGA-204ENST00000556076 K7EIM0 57 aa12.12□□□□□ -0.47
CHGA-204ENST00000556076 FAAP20Q6NZ36 180 aa12.12□□□□□ -0.47
CHGA-204ENST00000556076 UBAC2Q8NBM4 344 aa12.12□□□□□ -0.47
CHGA-204ENST00000556076 OR5B3Q8NH48 314 aa12.12□□□□□ -0.47
CHGA-204ENST00000556076 OR4A16Q8NH70 328 aa12.12□□□□□ -0.47
CHGA-204ENST00000556076 SCARB1Q8WTV0 552 aa12.12□□□□□ -0.47
CHGA-204ENST00000556076 HIPK2Q9H2X6 1198 aa12.12□□□□□ -0.47
CHGA-204ENST00000556076 TECRQ9NZ01 308 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms