RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 SCGB1D1O95968 90 aa13.23□□□□□ -0.29
TUBB3-209ENST00000555609 IGHV3-7P01780 117 aa13.23□□□□□ -0.29
TUBB3-209ENST00000555609 CT45A6P0DMU7 189 aa13.23□□□□□ -0.29
TUBB3-209ENST00000555609 CT45A5P0DMU8 189 aa13.23□□□□□ -0.29
TUBB3-209ENST00000555609 CT45A7P0DMV0 189 aa13.23□□□□□ -0.29
TUBB3-209ENST00000555609 GNG4P50150 75 aa13.23□□□□□ -0.29
TUBB3-209ENST00000555609 MEF2CQ06413 473 aaPredicted RBP13.23□□□□□ -0.29
TUBB3-209ENST00000555609 PRSS8Q16651 343 aa13.23□□□□□ -0.29
TUBB3-209ENST00000555609 DEFB109BQ30KR1 87 aa13.23□□□□□ -0.29
TUBB3-209ENST00000555609 MIR17HGQ75NE6 70 aa13.23□□□□□ -0.29
TUBB3-209ENST00000555609 LEAP2Q969E1 77 aa13.23□□□□□ -0.29
TUBB3-209ENST00000555609 MRPL18Q9H0U6 180 aaKnown RBP13.23□□□□□ -0.29
TUBB3-209ENST00000555609 LINC00312Q9Y6C7 94 aa13.23□□□□□ -0.29
TUBB3-209ENST00000555609 ASPMQ8IZT6 3477 aa13.22□□□□□ -0.29
TUBB3-209ENST00000555609 KIR2DL5BA0A0G2JN68 375 aa13.22□□□□□ -0.29
TUBB3-209ENST00000555609 KIR2DL5BA0A0G2JPC4 375 aa13.22□□□□□ -0.29
TUBB3-209ENST00000555609 TEX50A0A1B0GTY4 177 aa13.22□□□□□ -0.29
TUBB3-209ENST00000555609 IGHV1-46P01743 117 aa13.22□□□□□ -0.29
TUBB3-209ENST00000555609 CRISP2P16562 243 aa13.22□□□□□ -0.29
TUBB3-209ENST00000555609 WT1P19544 449 aaPredicted RBP13.22□□□□□ -0.29
TUBB3-209ENST00000555609 SRSF6Q13247 344 aaKnown RBP13.22□□□□□ -0.29
TUBB3-209ENST00000555609 PSG5Q15238 335 aa13.22□□□□□ -0.29
TUBB3-209ENST00000555609 ZNF833PQ6ZTB9 187 aa13.22□□□□□ -0.29
TUBB3-209ENST00000555609 TCF23Q7RTU1 214 aa13.22□□□□□ -0.29
TUBB3-209ENST00000555609 MMD2Q8IY49 270 aa13.22□□□□□ -0.29
TUBB3-209ENST00000555609 KIR2DL5AQ8N109 375 aa13.22□□□□□ -0.29
TUBB3-209ENST00000555609 TMEM256Q8N2U0 113 aa13.22□□□□□ -0.29
TUBB3-209ENST00000555609 NUP37Q8NFH4 326 aa13.22□□□□□ -0.29
TUBB3-209ENST00000555609 OR1L6Q8NGR2 347 aa13.22□□□□□ -0.29
TUBB3-209ENST00000555609 OR4A5Q8NH83 315 aa13.22□□□□□ -0.29
TUBB3-209ENST00000555609 V9GYV3 84 aa13.22□□□□□ -0.29
TUBB3-209ENST00000555609 A0A1B0GV90 55 aa13.21□□□□□ -0.29
TUBB3-209ENST00000555609 TIGITQ495A1 244 aa13.21□□□□□ -0.29
TUBB3-209ENST00000555609 FAM71F2Q6NXP2 309 aa13.21□□□□□ -0.29
TUBB3-209ENST00000555609 HINT2Q9BX68 163 aa13.21□□□□□ -0.29
TUBB3-209ENST00000555609 GAL3ST2Q9H3Q3 398 aa13.21□□□□□ -0.29
TUBB3-209ENST00000555609 SPAARA0A1B0GVQ0 90 aa13.21□□□□□ -0.3
TUBB3-209ENST00000555609 NKX6-3A6NJ46 265 aa13.21□□□□□ -0.3
TUBB3-209ENST00000555609 ISLRO14498 428 aa13.21□□□□□ -0.3
TUBB3-209ENST00000555609 APOA2P02652 100 aa13.21□□□□□ -0.3
TUBB3-209ENST00000555609 CD69Q07108 199 aa13.21□□□□□ -0.3
TUBB3-209ENST00000555609 HLA-DRB5Q30154 266 aa13.21□□□□□ -0.3
TUBB3-209ENST00000555609 TMEM106BQ9NUM4 274 aa13.21□□□□□ -0.3
TUBB3-209ENST00000555609 A0A1W2PN81 502 aa13.2□□□□□ -0.3
TUBB3-209ENST00000555609 OR4A8P0C604 315 aa13.2□□□□□ -0.3
TUBB3-209ENST00000555609 C8orf88P0DMB2 117 aa13.2□□□□□ -0.3
TUBB3-209ENST00000555609 RNASE2P10153 161 aaKnown RBP13.2□□□□□ -0.3
TUBB3-209ENST00000555609 SELLP14151 372 aa13.2□□□□□ -0.3
TUBB3-209ENST00000555609 CX3CL1P78423 397 aa13.2□□□□□ -0.3
TUBB3-209ENST00000555609 ERHP84090 104 aaKnown RBP13.2□□□□□ -0.3
TUBB3-209ENST00000555609 CENPWQ5EE01 88 aa13.2□□□□□ -0.3
TUBB3-209ENST00000555609 VHLLQ6RSH7 139 aa13.2□□□□□ -0.3
TUBB3-209ENST00000555609 FAM215AQ9Y5M1 114 aa13.2□□□□□ -0.3
TUBB3-209ENST00000555609 TET2Q6N021 2002 aaPredicted RBP13.2□□□□□ -0.3
TUBB3-209ENST00000555609 FCN1O00602 326 aa13.19□□□□□ -0.3
TUBB3-209ENST00000555609 CRYABP02511 175 aaKnown RBP13.19□□□□□ -0.3
TUBB3-209ENST00000555609 TNFRSF1AP19438 455 aa13.19□□□□□ -0.3
TUBB3-209ENST00000555609 CEACAM8P31997 349 aaPredicted RBP13.19□□□□□ -0.3
TUBB3-209ENST00000555609 UTF1Q5T230 341 aa13.19□□□□□ -0.3
TUBB3-209ENST00000555609 C8orf31Q8N9H6 132 aa13.19□□□□□ -0.3
TUBB3-209ENST00000555609 MISP3Q96FF7 219 aa13.19□□□□□ -0.3
TUBB3-209ENST00000555609 ZNF714Q96N38 554 aa13.19□□□□□ -0.3
TUBB3-209ENST00000555609 CCL13Q99616 98 aa13.19□□□□□ -0.3
TUBB3-209ENST00000555609 HNF1AP20823 631 aa13.19□□□□□ -0.3
TUBB3-209ENST00000555609 CBLN1P23435 193 aa13.19□□□□□ -0.3
TUBB3-209ENST00000555609 PPOXP50336 477 aa13.19□□□□□ -0.3
TUBB3-209ENST00000555609 TMEM177Q53S58 311 aa13.19□□□□□ -0.3
TUBB3-209ENST00000555609 FAM201AQ5SY85 155 aa13.19□□□□□ -0.3
TUBB3-209ENST00000555609 Q6ZS92 163 aa13.19□□□□□ -0.3
TUBB3-209ENST00000555609 SSX8Q7RTT4 187 aa13.19□□□□□ -0.3
TUBB3-209ENST00000555609 VSTM2AQ8TAG5 236 aa13.19□□□□□ -0.3
TUBB3-209ENST00000555609 SLC25A33Q9BSK2 321 aa13.19□□□□□ -0.3
TUBB3-209ENST00000555609 NDUFA4L2Q9NRX3 87 aa13.19□□□□□ -0.3
TUBB3-209ENST00000555609 POLR3KQ9Y2Y1 108 aaPredicted RBP13.19□□□□□ -0.3
TUBB3-209ENST00000555609 SRRM4A7MD48 611 aaKnown RBP13.18□□□□□ -0.3
TUBB3-209ENST00000555609 SLC17A3O00476 420 aa13.18□□□□□ -0.3
TUBB3-209ENST00000555609 NUPR1O60356 82 aa13.18□□□□□ -0.3
TUBB3-209ENST00000555609 ACTL6BO94805 426 aa13.18□□□□□ -0.3
TUBB3-209ENST00000555609 USF1P22415 310 aaPredicted RBP13.18□□□□□ -0.3
TUBB3-209ENST00000555609 CD40P25942 277 aa13.18□□□□□ -0.3
TUBB3-209ENST00000555609 CRYBB3P26998 211 aa13.18□□□□□ -0.3
TUBB3-209ENST00000555609 GNG10P50151 68 aa13.18□□□□□ -0.3
TUBB3-209ENST00000555609 USF2Q15853 346 aaPredicted RBP13.18□□□□□ -0.3
TUBB3-209ENST00000555609 OR10J3Q5JRS4 329 aa13.18□□□□□ -0.3
TUBB3-209ENST00000555609 ZNF503Q96F45 646 aa13.18□□□□□ -0.3
TUBB3-209ENST00000555609 TP53TG3Q9ULZ0 132 aa13.18□□□□□ -0.3
TUBB3-209ENST00000555609 NCOR2Q9Y618 2525 aa13.18□□□□□ -0.3
TUBB3-209ENST00000555609 M0QZK8 103 aa13.17□□□□□ -0.3
TUBB3-209ENST00000555609 SAA1P0DJI8 122 aaPredicted RBP13.17□□□□□ -0.3
TUBB3-209ENST00000555609 RELQ04864 619 aaPredicted RBP13.17□□□□□ -0.3
TUBB3-209ENST00000555609 KRTCAP3Q53RY4 240 aa13.17□□□□□ -0.3
TUBB3-209ENST00000555609 OR5AN1Q8NGI8 311 aa13.17□□□□□ -0.3
TUBB3-209ENST00000555609 OR1L4Q8NGR5 311 aa13.17□□□□□ -0.3
TUBB3-209ENST00000555609 C20orf144Q9BQM9 153 aa13.17□□□□□ -0.3
TUBB3-209ENST00000555609 COMMD5Q9GZQ3 224 aa13.17□□□□□ -0.3
TUBB3-209ENST00000555609 SNURFLB1AK76 121 aa13.16□□□□□ -0.3
TUBB3-209ENST00000555609 M0R143 59 aa13.16□□□□□ -0.3
TUBB3-209ENST00000555609 OR7C2O60412 319 aa13.16□□□□□ -0.3
TUBB3-209ENST00000555609 IER3P46695 156 aa13.16□□□□□ -0.3
TUBB3-209ENST00000555609 SUB1P53999 127 aaKnown RBP eCLIP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms