RNA–Protein interactions for RNA: ENST00000555047.1

APAF1-213, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 5

Gene APAF1, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-213ENST00000555047 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.55□□□□□ -2.16
APAF1-213ENST00000555047 MRPL27Q9P0M9 148 aaKnown RBP1.55□□□□□ -2.16
APAF1-213ENST00000555047 CRCT1Q9UGL9 99 aa1.55□□□□□ -2.16
APAF1-213ENST00000555047 AMMECR1Q9Y4X0 333 aaPredicted RBP1.55□□□□□ -2.16
APAF1-213ENST00000555047 RGS12O14924 1447 aa1.55□□□□□ -2.16
APAF1-213ENST00000555047 SMARCA4P51532 1647 aa1.55□□□□□ -2.16
APAF1-213ENST00000555047 ORC5O43913 435 aa1.54□□□□□ -2.16
APAF1-213ENST00000555047 IFNA10P01566 189 aa1.54□□□□□ -2.16
APAF1-213ENST00000555047 TTRP02766 147 aa1.54□□□□□ -2.16
APAF1-213ENST00000555047 RPS17P08708 135 aaKnown RBP1.54□□□□□ -2.16
APAF1-213ENST00000555047 DEFA4P12838 97 aa1.54□□□□□ -2.16
APAF1-213ENST00000555047 AQP4P55087 323 aa1.54□□□□□ -2.16
APAF1-213ENST00000555047 HBA1P69905 142 aa1.54□□□□□ -2.16
APAF1-213ENST00000555047 ELOBQ15370 118 aa1.54□□□□□ -2.16
APAF1-213ENST00000555047 SPANXN3Q5MJ09 141 aa1.54□□□□□ -2.16
APAF1-213ENST00000555047 AADACL3Q5VUY0 350 aa1.54□□□□□ -2.16
APAF1-213ENST00000555047 C7orf65Q6ZTY9 151 aa1.54□□□□□ -2.16
APAF1-213ENST00000555047 RPS19BP1Q86WX3 136 aaKnown RBP1.54□□□□□ -2.16
APAF1-213ENST00000555047 DHFR2Q86XF0 187 aa1.54□□□□□ -2.16
APAF1-213ENST00000555047 ANKRD29Q8N6D5 301 aa1.54□□□□□ -2.16
APAF1-213ENST00000555047 OR8B3Q8NGG8 313 aa1.54□□□□□ -2.16
APAF1-213ENST00000555047 BORCS7Q96B45 105 aa1.54□□□□□ -2.16
APAF1-213ENST00000555047 PPP1R2P1Q96PQ5 205 aa1.54□□□□□ -2.16
APAF1-213ENST00000555047 DERL1Q9BUN8 251 aa1.54□□□□□ -2.16
APAF1-213ENST00000555047 C20orf27Q9GZN8 174 aa1.54□□□□□ -2.16
APAF1-213ENST00000555047 OR51V1Q9H2C8 321 aa1.54□□□□□ -2.16
APAF1-213ENST00000555047 CMTM6Q9NX76 183 aa1.54□□□□□ -2.16
APAF1-213ENST00000555047 FBXL12Q9NXK8 326 aa1.54□□□□□ -2.16
APAF1-213ENST00000555047 SLC22A13Q9Y226 551 aa1.54□□□□□ -2.16
APAF1-213ENST00000555047 TMEM56-RWDD3S4R434 201 aa1.54□□□□□ -2.16
APAF1-213ENST00000555047 NCOA1Q15788 1441 aa1.54□□□□□ -2.16
APAF1-213ENST00000555047 SDK1Q7Z5N4 2213 aa1.54□□□□□ -2.16
APAF1-213ENST00000555047 TRAPPC13A5PLN9 417 aa1.53□□□□□ -2.16
APAF1-213ENST00000555047 TRAPPC2LH3BP13 241 aa1.53□□□□□ -2.16
APAF1-213ENST00000555047 SDCBPO00560 298 aaPredicted RBP1.53□□□□□ -2.16
APAF1-213ENST00000555047 LYPLA2O95372 231 aa1.53□□□□□ -2.16
APAF1-213ENST00000555047 GPX2P18283 190 aa1.53□□□□□ -2.16
APAF1-213ENST00000555047 RPS4Y1P22090 263 aaKnown RBP1.53□□□□□ -2.16
APAF1-213ENST00000555047 MAGEA12P43365 314 aa1.53□□□□□ -2.16
APAF1-213ENST00000555047 RPL5P46777 297 aaKnown RBP1.53□□□□□ -2.16
APAF1-213ENST00000555047 LSM6P62312 80 aaKnown RBP1.53□□□□□ -2.16
APAF1-213ENST00000555047 WRNQ14191 1432 aaPredicted RBP eCLIP1.53□□□□□ -2.16
APAF1-213ENST00000555047 EDDM3AQ14507 147 aa1.53□□□□□ -2.16
APAF1-213ENST00000555047 ARHGAP11BQ3KRB8 267 aa1.53□□□□□ -2.16
APAF1-213ENST00000555047 AKIRIN2Q53H80 203 aa1.53□□□□□ -2.16
APAF1-213ENST00000555047 OR6V1Q8N148 313 aa1.53□□□□□ -2.16
APAF1-213ENST00000555047 ZNF565Q8N9K5 539 aa1.53□□□□□ -2.16
APAF1-213ENST00000555047 KLK6Q92876 244 aa1.53□□□□□ -2.16
APAF1-213ENST00000555047 TOMM6Q96B49 74 aa1.53□□□□□ -2.16
APAF1-213ENST00000555047 C8orf76Q96K31 380 aa1.53□□□□□ -2.16
APAF1-213ENST00000555047 TSPAN32Q96QS1 320 aa1.53□□□□□ -2.16
APAF1-213ENST00000555047 CMSS1Q9BQ75 279 aaKnown RBP1.53□□□□□ -2.16
APAF1-213ENST00000555047 BAIAP2Q9UQB8 552 aa1.53□□□□□ -2.16
APAF1-213ENST00000555047 BRWD1Q9NSI6 2320 aa1.52□□□□□ -2.17
APAF1-213ENST00000555047 MTUS2Q5JR59 1369 aa1.52□□□□□ -2.17
APAF1-213ENST00000555047 FAAHO00519 579 aa1.52□□□□□ -2.17
APAF1-213ENST00000555047 IGKV1-5P01602 117 aa1.52□□□□□ -2.17
APAF1-213ENST00000555047 TCRBP04435 133 aa1.52□□□□□ -2.17
APAF1-213ENST00000555047 CCL7P80098 99 aa1.52□□□□□ -2.17
APAF1-213ENST00000555047 SRSF6Q13247 344 aaKnown RBP1.52□□□□□ -2.17
APAF1-213ENST00000555047 KCNJ8Q15842 424 aa1.52□□□□□ -2.17
APAF1-213ENST00000555047 MOGQ16653 247 aa1.52□□□□□ -2.17
APAF1-213ENST00000555047 Q1T7F1 81 aa1.52□□□□□ -2.17
APAF1-213ENST00000555047 IAH1Q2TAA2 248 aaPredicted RBP1.52□□□□□ -2.17
APAF1-213ENST00000555047 TMEM106AQ96A25 262 aa1.52□□□□□ -2.17
APAF1-213ENST00000555047 HEATR5AQ86XA9 2040 aa1.52□□□□□ -2.17
APAF1-213ENST00000555047 MAST2Q6P0Q8 1798 aa1.52□□□□□ -2.17
APAF1-213ENST00000555047 COL4A1P02462 1669 aa1.51□□□□□ -2.17
APAF1-213ENST00000555047 CCDC88CQ9P219 2028 aa1.51□□□□□ -2.17
APAF1-213ENST00000555047 TRAV9-1A0A075B6T8 112 aa1.51□□□□□ -2.17
APAF1-213ENST00000555047 EXOC1LA0A1B0GW35 172 aa1.51□□□□□ -2.17
APAF1-213ENST00000555047 IGKV2-29A2NJV5 120 aaPredicted RBP1.51□□□□□ -2.17
APAF1-213ENST00000555047 DPRXA6NFQ7 191 aa1.51□□□□□ -2.17
APAF1-213ENST00000555047 OR4C46A6NHA9 309 aa1.51□□□□□ -2.17
APAF1-213ENST00000555047 IBA57-AS1B1ANH7 110 aa1.51□□□□□ -2.17
APAF1-213ENST00000555047 RPSAP08865 295 aaKnown RBP1.51□□□□□ -2.17
APAF1-213ENST00000555047 RANP62826 216 aaKnown RBP1.51□□□□□ -2.17
APAF1-213ENST00000555047 SUPT4H1P63272 117 aaKnown RBP1.51□□□□□ -2.17
APAF1-213ENST00000555047 HIST1H3AP68431 136 aa1.51□□□□□ -2.17
APAF1-213ENST00000555047 H3F3AP84243 136 aa1.51□□□□□ -2.17
APAF1-213ENST00000555047 NNATQ16517 81 aa1.51□□□□□ -2.17
APAF1-213ENST00000555047 OR5B17Q8NGF7 314 aa1.51□□□□□ -2.17
APAF1-213ENST00000555047 SCGB3A1Q96QR1 104 aa1.51□□□□□ -2.17
APAF1-213ENST00000555047 MRPL32Q9BYC8 188 aaKnown RBP1.51□□□□□ -2.17
APAF1-213ENST00000555047 TRIM4Q9C037 500 aa1.51□□□□□ -2.17
APAF1-213ENST00000555047 YIPF3Q9GZM5 350 aa1.51□□□□□ -2.17
APAF1-213ENST00000555047 PKIGQ9Y2B9 76 aa1.51□□□□□ -2.17
APAF1-213ENST00000555047 LHFPL6Q9Y693 200 aa1.51□□□□□ -2.17
APAF1-213ENST00000555047 KIF13BQ9NQT8 1826 aa1.51□□□□□ -2.17
APAF1-213ENST00000555047 PRRC2BQ5JSZ5 2229 aaKnown RBP1.51□□□□□ -2.17
APAF1-213ENST00000555047 FREM1Q5H8C1 2179 aa1.5□□□□□ -2.17
APAF1-213ENST00000555047 TRAV26-2A0A0B4J265 109 aa1.5□□□□□ -2.17
APAF1-213ENST00000555047 SMIM9A6NGZ8 99 aa1.5□□□□□ -2.17
APAF1-213ENST00000555047 TMEM114B3SHH9 223 aa1.5□□□□□ -2.17
APAF1-213ENST00000555047 CRYZL1O95825 349 aa1.5□□□□□ -2.17
APAF1-213ENST00000555047 PMP2P02689 132 aa1.5□□□□□ -2.17
APAF1-213ENST00000555047 CRPP02741 224 aa1.5□□□□□ -2.17
APAF1-213ENST00000555047 EIF2B2P49770 351 aaKnown RBP1.5□□□□□ -2.17
APAF1-213ENST00000555047 FADDQ13158 208 aa1.5□□□□□ -2.17
APAF1-213ENST00000555047 FP248Q71RG6 208 aaPredicted RBP1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms