RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 CD5LO43866 347 aa14.09□□□□□ -0.15
SHOX-204ENST00000554971 FOXH1O75593 365 aa14.09□□□□□ -0.15
SHOX-204ENST00000554971 RPS10P46783 165 aaKnown RBP14.09□□□□□ -0.15
SHOX-204ENST00000554971 FGF8P55075 233 aaPredicted RBP14.09□□□□□ -0.15
SHOX-204ENST00000554971 LRRC10Q5BKY1 277 aa14.09□□□□□ -0.15
SHOX-204ENST00000554971 FFAR4Q5NUL3 377 aa14.09□□□□□ -0.15
SHOX-204ENST00000554971 PRAMEF5Q5TYX0 476 aa14.09□□□□□ -0.15
SHOX-204ENST00000554971 CYP2G1PQ6ZSU1 146 aa14.09□□□□□ -0.15
SHOX-204ENST00000554971 QTRT1Q9BXR0 403 aaKnown RBP14.09□□□□□ -0.15
SHOX-204ENST00000554971 HIF1ANQ9NWT6 349 aa14.09□□□□□ -0.15
SHOX-204ENST00000554971 GFOD1Q9NXC2 390 aa14.09□□□□□ -0.15
SHOX-204ENST00000554971 ZNF727A8MUV8 499 aa14.08□□□□□ -0.16
SHOX-204ENST00000554971 SEC14L6B5MCN3 397 aa14.08□□□□□ -0.16
SHOX-204ENST00000554971 IGKV1D-33P01593 117 aa14.08□□□□□ -0.16
SHOX-204ENST00000554971 IGKV1-33P01594 117 aa14.08□□□□□ -0.16
SHOX-204ENST00000554971 OPN1MWP04001 364 aa14.08□□□□□ -0.16
SHOX-204ENST00000554971 OPN1MW2P0DN77 364 aa14.08□□□□□ -0.16
SHOX-204ENST00000554971 OPN1MW3P0DN78 364 aa14.08□□□□□ -0.16
SHOX-204ENST00000554971 CD1BP29016 333 aa14.08□□□□□ -0.16
SHOX-204ENST00000554971 THBS3P49746 956 aa14.08□□□□□ -0.16
SHOX-204ENST00000554971 OR2B8PP59922 312 aa14.08□□□□□ -0.16
SHOX-204ENST00000554971 FABP9Q0Z7S8 132 aa14.08□□□□□ -0.16
SHOX-204ENST00000554971 DDB2Q92466 427 aa14.08□□□□□ -0.16
SHOX-204ENST00000554971 CORO2AQ92828 525 aa14.08□□□□□ -0.16
SHOX-204ENST00000554971 ZDHHC16Q969W1 377 aa14.08□□□□□ -0.16
SHOX-204ENST00000554971 TMEM186Q96B77 213 aa14.08□□□□□ -0.16
SHOX-204ENST00000554971 TRGV10A0A0A0MS01 117 aa14.07□□□□□ -0.16
SHOX-204ENST00000554971 OR9G9P0C7N8 305 aa14.07□□□□□ -0.16
SHOX-204ENST00000554971 NDUFB7P17568 137 aa14.07□□□□□ -0.16
SHOX-204ENST00000554971 TMEM241Q24JQ0 296 aa14.07□□□□□ -0.16
SHOX-204ENST00000554971 Q8WTZ3 238 aa14.07□□□□□ -0.16
SHOX-204ENST00000554971 KCNIP2Q9NS61 270 aa14.07□□□□□ -0.16
SHOX-204ENST00000554971 RPUSD1Q9UJJ7 312 aaKnown RBP14.07□□□□□ -0.16
SHOX-204ENST00000554971 KBTBD11O94819 623 aa14.07□□□□□ -0.16
SHOX-204ENST00000554971 VDAC2P45880 294 aaPredicted RBP14.07□□□□□ -0.16
SHOX-204ENST00000554971 EDDM3BP56851 147 aa14.07□□□□□ -0.16
SHOX-204ENST00000554971 CD81P60033 236 aa14.07□□□□□ -0.16
SHOX-204ENST00000554971 Q71RC1 249 aaPredicted RBP14.07□□□□□ -0.16
SHOX-204ENST00000554971 TXNDC17Q9BRA2 123 aa14.07□□□□□ -0.16
SHOX-204ENST00000554971 TRBV24-1A0A075B6N3 115 aa14.06□□□□□ -0.16
SHOX-204ENST00000554971 LOC105371242A0A075B767 164 aa14.06□□□□□ -0.16
SHOX-204ENST00000554971 PPIAL4CA0A0B4J2A2 164 aa14.06□□□□□ -0.16
SHOX-204ENST00000554971 ZNF729A6NN14 1252 aaPredicted RBP14.06□□□□□ -0.16
SHOX-204ENST00000554971 RELBQ01201 579 aa14.06□□□□□ -0.16
SHOX-204ENST00000554971 POU2AF1Q16633 256 aa14.06□□□□□ -0.16
SHOX-204ENST00000554971 C17orf58Q2M2W7 97 aa14.06□□□□□ -0.16
SHOX-204ENST00000554971 LY6G5BQ8NDX9 201 aa14.06□□□□□ -0.16
SHOX-204ENST00000554971 OR10A7Q8NGE5 316 aa14.06□□□□□ -0.16
SHOX-204ENST00000554971 TRAV20A0A0B4J274 112 aa14.05□□□□□ -0.16
SHOX-204ENST00000554971 IGHV2-70DA0A0C4DH43 119 aa14.05□□□□□ -0.16
SHOX-204ENST00000554971 AVPP01185 164 aa14.05□□□□□ -0.16
SHOX-204ENST00000554971 OPRK1P41145 380 aa14.05□□□□□ -0.16
SHOX-204ENST00000554971 ZNF134P52741 427 aa14.05□□□□□ -0.16
SHOX-204ENST00000554971 ATP5IP56385 69 aaPredicted RBP14.05□□□□□ -0.16
SHOX-204ENST00000554971 LTC4SQ16873 150 aa14.05□□□□□ -0.16
SHOX-204ENST00000554971 TCF23Q7RTU1 214 aa14.05□□□□□ -0.16
SHOX-204ENST00000554971 C8orf46Q8TAG6 207 aa14.05□□□□□ -0.16
SHOX-204ENST00000554971 RAB24Q969Q5 203 aa14.05□□□□□ -0.16
SHOX-204ENST00000554971 TMPRSS5Q9H3S3 457 aa14.05□□□□□ -0.16
SHOX-204ENST00000554971 INSIG2Q9Y5U4 225 aa14.05□□□□□ -0.16
SHOX-204ENST00000554971 A0A1W2PPE3 182 aa14.05□□□□□ -0.16
SHOX-204ENST00000554971 VENTXO95231 258 aa14.05□□□□□ -0.16
SHOX-204ENST00000554971 HOXA5P20719 270 aa14.05□□□□□ -0.16
SHOX-204ENST00000554971 ERVFRD-1P60508 538 aa14.05□□□□□ -0.16
SHOX-204ENST00000554971 KIAA0141Q14154 515 aaPredicted RBP14.05□□□□□ -0.16
SHOX-204ENST00000554971 C1orf229Q6ZS94 237 aaPredicted RBP14.05□□□□□ -0.16
SHOX-204ENST00000554971 H1FXQ92522 213 aaKnown RBP14.05□□□□□ -0.16
SHOX-204ENST00000554971 SMIM7Q9BQ49 75 aa14.05□□□□□ -0.16
SHOX-204ENST00000554971 HEYLQ9NQ87 328 aaPredicted RBP14.05□□□□□ -0.16
SHOX-204ENST00000554971 FNDC10F2Z333 226 aa14.04□□□□□ -0.16
SHOX-204ENST00000554971 HRASP01112 189 aa14.04□□□□□ -0.16
SHOX-204ENST00000554971 IFNA10P01566 189 aa14.04□□□□□ -0.16
SHOX-204ENST00000554971 CDC34P49427 236 aaPredicted RBP14.04□□□□□ -0.16
SHOX-204ENST00000554971 TMEM140Q9NV12 185 aa14.04□□□□□ -0.16
SHOX-204ENST00000554971 FOXA2Q9Y261 457 aaPredicted RBP14.04□□□□□ -0.16
SHOX-204ENST00000554971 CXCL1P09341 107 aa14.03□□□□□ -0.16
SHOX-204ENST00000554971 RPL31P62899 125 aaKnown RBP14.03□□□□□ -0.16
SHOX-204ENST00000554971 ZNF674Q2M3X9 581 aa14.03□□□□□ -0.16
SHOX-204ENST00000554971 RPL39P5Q59GN2 51 aa14.03□□□□□ -0.16
SHOX-204ENST00000554971 CT45A1Q5HYN5 189 aa14.03□□□□□ -0.16
SHOX-204ENST00000554971 CT45A3Q8NHU0 189 aa14.03□□□□□ -0.16
SHOX-204ENST00000554971 FAM210BQ96KR6 192 aa14.03□□□□□ -0.16
SHOX-204ENST00000554971 SLC25A22Q9H936 323 aa14.03□□□□□ -0.16
SHOX-204ENST00000554971 IDI2-AS1Q9NZ38 188 aa14.03□□□□□ -0.16
SHOX-204ENST00000554971 C15orf61A6NNL5 157 aa14.03□□□□□ -0.16
SHOX-204ENST00000554971 LINC00205P59089 165 aa14.03□□□□□ -0.16
SHOX-204ENST00000554971 HSPE1P61604 102 aaKnown RBP14.03□□□□□ -0.16
SHOX-204ENST00000554971 PAX8Q06710 450 aa14.03□□□□□ -0.16
SHOX-204ENST00000554971 Q8N7P7 452 aa14.03□□□□□ -0.16
SHOX-204ENST00000554971 ZNF439Q8NDP4 499 aa14.03□□□□□ -0.16
SHOX-204ENST00000554971 TRBV23-1A0A0A0MS06 115 aa14.02□□□□□ -0.16
SHOX-204ENST00000554971 PRSS46E5RG02 174 aa14.02□□□□□ -0.16
SHOX-204ENST00000554971 ENSAO43768 121 aaKnown RBP14.02□□□□□ -0.16
SHOX-204ENST00000554971 PDE6DO43924 150 aa14.02□□□□□ -0.16
SHOX-204ENST00000554971 PPIAL4GP0DN37 164 aa14.02□□□□□ -0.16
SHOX-204ENST00000554971 CDX1P47902 265 aaPredicted RBP14.02□□□□□ -0.16
SHOX-204ENST00000554971 TMEM200BQ69YZ2 307 aa14.02□□□□□ -0.16
SHOX-204ENST00000554971 ANAPC16Q96DE5 110 aa14.02□□□□□ -0.16
SHOX-204ENST00000554971 NPVFQ9HCQ7 196 aa14.02□□□□□ -0.16
SHOX-204ENST00000554971 YAE1D1Q9NRH1 226 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms