RNA–Protein interactions for RNA: ENST00000554808.1

LINC01397-201, Transcript of long intergenic non-protein coding RNA 1397, humanhuman

TSL 4 BASIC

Gene LINC01397, Length 579 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01397-201ENST00000554808 U3KQ87 197 aa6.31□□□□□ -1.4
LINC01397-201ENST00000554808 TRBV9A0A0B4J1U6 114 aa6.3□□□□□ -1.4
LINC01397-201ENST00000554808 C5orf51A6NDU8 294 aa6.3□□□□□ -1.4
LINC01397-201ENST00000554808 HMX3A6NHT5 357 aa6.3□□□□□ -1.4
LINC01397-201ENST00000554808 CGB1A6NKQ9 187 aa6.3□□□□□ -1.4
LINC01397-201ENST00000554808 E7EUB6 86 aa6.3□□□□□ -1.4
LINC01397-201ENST00000554808 ADAP1O75689 374 aa6.3□□□□□ -1.4
LINC01397-201ENST00000554808 TRGV3P03979 118 aa6.3□□□□□ -1.4
LINC01397-201ENST00000554808 OR13C7P0DN81 318 aa6.3□□□□□ -1.4
LINC01397-201ENST00000554808 PF4V1P10720 104 aa6.3□□□□□ -1.4
LINC01397-201ENST00000554808 SPNP16150 400 aa6.3□□□□□ -1.4
LINC01397-201ENST00000554808 PVALBP20472 110 aaPredicted RBP6.3□□□□□ -1.4
LINC01397-201ENST00000554808 CDX1P47902 265 aaPredicted RBP6.3□□□□□ -1.4
LINC01397-201ENST00000554808 RAB9AP51151 201 aa6.3□□□□□ -1.4
LINC01397-201ENST00000554808 TPPP2P59282 170 aa6.3□□□□□ -1.4
LINC01397-201ENST00000554808 ID3Q02535 119 aa6.3□□□□□ -1.4
LINC01397-201ENST00000554808 EXOSC2Q13868 293 aaKnown RBP6.3□□□□□ -1.4
LINC01397-201ENST00000554808 C2orf68Q2NKX9 166 aa6.3□□□□□ -1.4
LINC01397-201ENST00000554808 ASPHD1Q5U4P2 390 aa6.3□□□□□ -1.4
LINC01397-201ENST00000554808 Q6ZRM9 215 aa6.3□□□□□ -1.4
LINC01397-201ENST00000554808 ZBTB8BQ8NAP8 495 aaPredicted RBP6.3□□□□□ -1.4
LINC01397-201ENST00000554808 NECAP1Q8NC96 275 aa6.3□□□□□ -1.4
LINC01397-201ENST00000554808 OR4D5Q8NGN0 318 aa6.3□□□□□ -1.4
LINC01397-201ENST00000554808 DTD1Q8TEA8 209 aa6.3□□□□□ -1.4
LINC01397-201ENST00000554808 CXorf58Q96LI9 332 aa6.3□□□□□ -1.4
LINC01397-201ENST00000554808 UBE2E2Q96LR5 201 aa6.3□□□□□ -1.4
LINC01397-201ENST00000554808 RAB40CQ96S21 281 aa6.3□□□□□ -1.4
LINC01397-201ENST00000554808 NMES1Q9C002 83 aa6.3□□□□□ -1.4
LINC01397-201ENST00000554808 MED28Q9H204 178 aa6.3□□□□□ -1.4
LINC01397-201ENST00000554808 HEYLQ9NQ87 328 aaPredicted RBP6.3□□□□□ -1.4
LINC01397-201ENST00000554808 ZNF355PQ9NSJ1 428 aa6.3□□□□□ -1.4
LINC01397-201ENST00000554808 GAR1Q9NY12 217 aaKnown RBP6.3□□□□□ -1.4
LINC01397-201ENST00000554808 F11RQ9Y624 299 aaKnown RBP6.3□□□□□ -1.4
LINC01397-201ENST00000554808 ALG5Q9Y673 324 aa6.3□□□□□ -1.4
LINC01397-201ENST00000554808 C13orf42A0A1B0GVH6 325 aa6.29□□□□□ -1.4
LINC01397-201ENST00000554808 A0A1B0GW64 132 aa6.29□□□□□ -1.4
LINC01397-201ENST00000554808 TCRBV4S1A1TA0A5B7 111 aa6.29□□□□□ -1.4
LINC01397-201ENST00000554808 FAM25EA8MYX2 175 aa6.29□□□□□ -1.4
LINC01397-201ENST00000554808 GOSR2O14653 212 aa6.29□□□□□ -1.4
LINC01397-201ENST00000554808 WIPF1O43516 503 aa6.29□□□□□ -1.4
LINC01397-201ENST00000554808 SYNGR2O43760 224 aa6.29□□□□□ -1.4
LINC01397-201ENST00000554808 SCGB2A1O75556 95 aa6.29□□□□□ -1.4
LINC01397-201ENST00000554808 AREGP15514 252 aa6.29□□□□□ -1.4
LINC01397-201ENST00000554808 TAS2R30P59541 319 aa6.29□□□□□ -1.4
LINC01397-201ENST00000554808 RAB11AP62491 216 aa6.29□□□□□ -1.4
LINC01397-201ENST00000554808 RPL23AP62750 156 aaKnown RBP6.29□□□□□ -1.4
LINC01397-201ENST00000554808 RUNX1Q01196 453 aa6.29□□□□□ -1.4
LINC01397-201ENST00000554808 WT1-ASQ06250 92 aa6.29□□□□□ -1.4
LINC01397-201ENST00000554808 IZUMO4Q1ZYL8 232 aa6.29□□□□□ -1.4
LINC01397-201ENST00000554808 BSXQ3C1V8 233 aa6.29□□□□□ -1.4
LINC01397-201ENST00000554808 C2orf83Q53S99 150 aa6.29□□□□□ -1.4
LINC01397-201ENST00000554808 KHDC1LQ5JSQ8 128 aa6.29□□□□□ -1.4
LINC01397-201ENST00000554808 SLC24A4Q8NFF2 622 aa6.29□□□□□ -1.4
LINC01397-201ENST00000554808 OR5T1Q8NG75 326 aa6.29□□□□□ -1.4
LINC01397-201ENST00000554808 OR10W1Q8NGF6 305 aa6.29□□□□□ -1.4
LINC01397-201ENST00000554808 C4orf3Q8WVX3 66 aa6.29□□□□□ -1.4
LINC01397-201ENST00000554808 OR10C1Q96KK4 312 aa6.29□□□□□ -1.4
LINC01397-201ENST00000554808 TENM1Q9UKZ4 2725 aa6.28□□□□□ -1.4
LINC01397-201ENST00000554808 IGLV11-55A0A075B6I3 123 aa6.28□□□□□ -1.4
LINC01397-201ENST00000554808 TRBV7-1A0A0A6YYK4 115 aa6.28□□□□□ -1.4
LINC01397-201ENST00000554808 RPS10-NUDT3A0A1W2PQS6 291 aa6.28□□□□□ -1.4
LINC01397-201ENST00000554808 M0QZ24 198 aa6.28□□□□□ -1.4
LINC01397-201ENST00000554808 SOX15O60248 233 aa6.28□□□□□ -1.4
LINC01397-201ENST00000554808 RLN2P04090 185 aa6.28□□□□□ -1.4
LINC01397-201ENST00000554808 APELAP0DMC3 54 aa6.28□□□□□ -1.4
LINC01397-201ENST00000554808 MYOD1P15172 320 aa6.28□□□□□ -1.4
LINC01397-201ENST00000554808 NPY1RP25929 384 aa6.28□□□□□ -1.4
LINC01397-201ENST00000554808 RRAS2P62070 204 aaPredicted RBP6.28□□□□□ -1.4
LINC01397-201ENST00000554808 ETFRF1Q6IPR1 90 aa6.28□□□□□ -1.4
LINC01397-201ENST00000554808 SLC25A24Q6NUK1 477 aa6.28□□□□□ -1.4
LINC01397-201ENST00000554808 ZNF491Q8N8L2 437 aa6.28□□□□□ -1.4
LINC01397-201ENST00000554808 OR4F17Q8NGA8 305 aa6.28□□□□□ -1.4
LINC01397-201ENST00000554808 RNASEH2CQ8TDP1 164 aaKnown RBP6.28□□□□□ -1.4
LINC01397-201ENST00000554808 VN1R17PQ8TDU5 208 aa6.28□□□□□ -1.4
LINC01397-201ENST00000554808 TAF15Q92804 592 aaKnown RBP eCLIP6.28□□□□□ -1.4
LINC01397-201ENST00000554808 OR4F4Q96R69 305 aa6.28□□□□□ -1.4
LINC01397-201ENST00000554808 RBKSQ9H477 322 aa6.28□□□□□ -1.4
LINC01397-201ENST00000554808 GSKIPQ9P0R6 139 aa6.28□□□□□ -1.4
LINC01397-201ENST00000554808 MGAT4CQ9UBM8 478 aa6.28□□□□□ -1.4
LINC01397-201ENST00000554808 CMYA5Q8N3K9 4069 aa6.28□□□□□ -1.4
LINC01397-201ENST00000554808 TRRAPQ9Y4A5 3859 aa6.27□□□□□ -1.41
LINC01397-201ENST00000554808 MPTX1A8MV57 137 aa6.27□□□□□ -1.41
LINC01397-201ENST00000554808 NUDT19A8MXV4 375 aa6.27□□□□□ -1.41
LINC01397-201ENST00000554808 L7N2F9 121 aa6.27□□□□□ -1.41
LINC01397-201ENST00000554808 CCSO14618 274 aa6.27□□□□□ -1.41
LINC01397-201ENST00000554808 TSC22D2O75157 780 aa6.27□□□□□ -1.41
LINC01397-201ENST00000554808 SCGB1D2O95969 90 aa6.27□□□□□ -1.41
LINC01397-201ENST00000554808 IFNA10P01566 189 aa6.27□□□□□ -1.41
LINC01397-201ENST00000554808 RPLP1P05386 114 aaKnown RBP6.27□□□□□ -1.41
LINC01397-201ENST00000554808 REG1AP05451 166 aa6.27□□□□□ -1.41
LINC01397-201ENST00000554808 LGALS1P09382 135 aaKnown RBP6.27□□□□□ -1.41
LINC01397-201ENST00000554808 RNASE2P10153 161 aaKnown RBP6.27□□□□□ -1.41
LINC01397-201ENST00000554808 CD28P10747 220 aa6.27□□□□□ -1.41
LINC01397-201ENST00000554808 SLC25A4P12235 298 aa6.27□□□□□ -1.41
LINC01397-201ENST00000554808 FCGR2BP31994 310 aaPredicted RBP6.27□□□□□ -1.41
LINC01397-201ENST00000554808 VAMP2P63027 116 aa6.27□□□□□ -1.41
LINC01397-201ENST00000554808 RHOGP84095 191 aa6.27□□□□□ -1.41
LINC01397-201ENST00000554808 ATP5G2Q06055 141 aa6.27□□□□□ -1.41
LINC01397-201ENST00000554808 SRSF4Q08170 494 aaKnown RBP6.27□□□□□ -1.41
LINC01397-201ENST00000554808 FGL1Q08830 312 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms