RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 MYOD1P15172 320 aa3.15□□□□□ -1.91
VTI1B-203ENST00000554636 SPNP16150 400 aa3.15□□□□□ -1.91
VTI1B-203ENST00000554636 FCGR2CP31995 323 aa3.15□□□□□ -1.91
VTI1B-203ENST00000554636 KIR2DS2P43631 304 aa3.15□□□□□ -1.91
VTI1B-203ENST00000554636 INSL3P51460 131 aa3.15□□□□□ -1.91
VTI1B-203ENST00000554636 ARPC4P59998 168 aa3.15□□□□□ -1.91
VTI1B-203ENST00000554636 LSM3P62310 102 aaKnown RBP3.15□□□□□ -1.91
VTI1B-203ENST00000554636 DCTN2Q13561 401 aaKnown RBP3.15□□□□□ -1.91
VTI1B-203ENST00000554636 TNXAQ16473 311 aa3.15□□□□□ -1.91
VTI1B-203ENST00000554636 DEFB121Q5J5C9 76 aa3.15□□□□□ -1.91
VTI1B-203ENST00000554636 VAX1Q5SQQ9 334 aa3.15□□□□□ -1.91
VTI1B-203ENST00000554636 ZNF343Q6P1L6 599 aa3.15□□□□□ -1.91
VTI1B-203ENST00000554636 IL34Q6ZMJ4 242 aa3.15□□□□□ -1.91
VTI1B-203ENST00000554636 C19orf35Q6ZS72 473 aa3.15□□□□□ -1.91
VTI1B-203ENST00000554636 HAPLN4Q86UW8 402 aa3.15□□□□□ -1.91
VTI1B-203ENST00000554636 ZNF429Q86V71 674 aa3.15□□□□□ -1.91
VTI1B-203ENST00000554636 CROCCP3Q8IVE0 287 aa3.15□□□□□ -1.91
VTI1B-203ENST00000554636 MMD2Q8IY49 270 aa3.15□□□□□ -1.91
VTI1B-203ENST00000554636 VKORC1L1Q8N0U8 176 aa3.15□□□□□ -1.91
VTI1B-203ENST00000554636 PUSL1Q8N0Z8 303 aaKnown RBP3.15□□□□□ -1.91
VTI1B-203ENST00000554636 OR4S2Q8NH73 311 aa3.15□□□□□ -1.91
VTI1B-203ENST00000554636 TMEM167AQ8TBQ9 72 aa3.15□□□□□ -1.91
VTI1B-203ENST00000554636 TCTEX1D2Q8WW35 142 aa3.15□□□□□ -1.91
VTI1B-203ENST00000554636 SRSF12Q8WXF0 261 aaKnown RBP3.15□□□□□ -1.91
VTI1B-203ENST00000554636 ACOT12Q8WYK0 555 aa3.15□□□□□ -1.91
VTI1B-203ENST00000554636 SLC25A46Q96AG3 418 aa3.15□□□□□ -1.91
VTI1B-203ENST00000554636 FUNDC2Q9BWH2 189 aa3.15□□□□□ -1.91
VTI1B-203ENST00000554636 NAA50Q9GZZ1 169 aaKnown RBP3.15□□□□□ -1.91
VTI1B-203ENST00000554636 ZNF430Q9H8G1 570 aaPredicted RBP3.15□□□□□ -1.91
VTI1B-203ENST00000554636 VCX3AQ9NNX9 186 aa3.15□□□□□ -1.91
VTI1B-203ENST00000554636 DIABLOQ9NR28 239 aa3.15□□□□□ -1.91
VTI1B-203ENST00000554636 CCL28Q9NRJ3 127 aa3.15□□□□□ -1.91
VTI1B-203ENST00000554636 COA4Q9NYJ1 87 aa3.15□□□□□ -1.91
VTI1B-203ENST00000554636 TAS2R8Q9NYW2 309 aa3.15□□□□□ -1.91
VTI1B-203ENST00000554636 ZMAT5Q9UDW3 170 aaKnown RBP3.15□□□□□ -1.91
VTI1B-203ENST00000554636 ZNF256Q9Y2P7 627 aaPredicted RBP3.15□□□□□ -1.91
VTI1B-203ENST00000554636 PRELID3BQ9Y3B1 194 aa3.15□□□□□ -1.91
VTI1B-203ENST00000554636 DNAH6Q9C0G6 4158 aa3.15□□□□□ -1.91
VTI1B-203ENST00000554636 TRBV9A0A0B4J1U6 114 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 TRAV3A0A0B4J244 114 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 A0A0G2JLM5 398 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 C13orf42A0A1B0GVH6 325 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 MSGN1A6NI15 193 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 FAM223BA6NKX1 122 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 SULT1C2O00338 296 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 RBFOX2O43251 390 aaKnown RBP eCLIP3.14□□□□□ -1.91
VTI1B-203ENST00000554636 CREBL2O60519 120 aaPredicted RBP3.14□□□□□ -1.91
VTI1B-203ENST00000554636 SAP30O75446 220 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 KBTBD11O94819 623 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 OR2A4O95047 310 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 S1PR2O95136 353 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 GABARAPO95166 117 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 CRYGCP07315 174 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 ZNF735P0CB33 412 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 GP9P14770 177 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 ZP3P21754 424 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 CD40LGP29965 261 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 GNRHRP30968 328 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 CBX5P45973 191 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 RPL27AP46776 148 aaKnown RBP3.14□□□□□ -1.91
VTI1B-203ENST00000554636 FXYD4P59646 89 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 VBP1P61758 197 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 RHOGP84095 191 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 EXOSC2Q13868 293 aaKnown RBP3.14□□□□□ -1.91
VTI1B-203ENST00000554636 KLF5Q13887 457 aaPredicted RBP3.14□□□□□ -1.91
VTI1B-203ENST00000554636 POU2AF1Q16633 256 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 KLK9Q2XQG4 91 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 TMEM69Q5SWH9 247 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 ZNF818PQ6ZRF7 136 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 SSX9Q7RTT3 188 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 FAM223AQ8IWN6 122 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 TTC9CQ8N5M4 171 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 SAMD12Q8N8I0 201 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 OR5AP2Q8NGF4 316 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 OR6Q1Q8NGQ2 317 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 GPX8Q8TED1 209 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 GIMAP1Q8WWP7 306 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 MOB3AQ96BX8 217 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 USMG5Q96IX5 58 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 OR2A7Q96R45 310 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 PHB2Q99623 299 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 DCUN1D5Q9BTE7 237 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 SLC5A7Q9GZV3 580 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 RANGRFQ9HD47 186 aaPredicted RBP3.14□□□□□ -1.91
VTI1B-203ENST00000554636 SCRT2Q9NQ03 307 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 IFT46Q9NQC8 304 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 ZNF355PQ9NSJ1 428 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 BET1LQ9NYM9 111 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 EHFQ9NZC4 300 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 HSPB7Q9UBY9 170 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 KLK9Q9UKQ9 250 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 ZNF257Q9Y2Q1 563 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 HYDINQ4G0P3 5121 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 STAB2Q8WWQ8 2551 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 BIRC6Q9NR09 4857 aa3.14□□□□□ -1.91
VTI1B-203ENST00000554636 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.13□□□□□ -1.91
VTI1B-203ENST00000554636 IGLC7A0M8Q6 106 aa3.13□□□□□ -1.91
VTI1B-203ENST00000554636 UPK2O00526 184 aa3.13□□□□□ -1.91
VTI1B-203ENST00000554636 HPGDSO60760 199 aa3.13□□□□□ -1.91
VTI1B-203ENST00000554636 PGLYRP1O75594 196 aaPredicted RBP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms